G183753


Basic Information

Item Value
gene id G183753
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 11747131 ~ 11747593 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU248829
GATTTTTCCGCCACCAAACTTCACTGTTTTCTGGGTGAATCTCGGATCCATGCGGGCTCCAGTAGGTCTCCTGCAATATTTGCGGCGACTGTGGTGTAATTCAACAGAAGATTCATCTGAAAAATCCACCTTCTTCCACTTTTCCAGCGTCCATCCTTTTAGCAGGCTGTGGGCCTTGGCAAATGCCACAcggttttttcttttgtcttttgtttagtGCTGGCTTCTGGGCACTGATTCGACCATGGAGGCCATTTCGAGACAGAATCCGACAAACTGTTCTGGTTGACACAGGGACTTCAGGTGACCAGGTCTCGTGGAGCTCTGCTGCAGTGGCAAATGGGCTGGCCTTGGATTTTCGAGCCAACAAACGGTCCTCTCGAGCAGTTGTCTTGCGGGGTCTGCCTGACCTGGGCTTGTCAAAAACGTCTCCAGtgtcttcaaatgttttttttatcctctg

Function

GO:

id name namespace
GO:0031226 intrinsic component of plasma membrane cellular_component
GO:0005887 integral component of plasma membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248829 True 463 lncRNA 0.49 1 11747131 11747593

Neighbor

gene id symbol gene type direction distance location
kcnk13b kcnk13,LOC106526329 coding downstream 74042 11659994 ~ 11673089 (-)
LOC120547092 psmc1 coding downstream 97071 11638846 ~ 11650060 (-)
LOC120546716 calm1,LOC107396020,LOC102778633,LOC102293206,LOC103380713 coding downstream 112801 11619704 ~ 11634330 (-)
LOC120546403 NA coding downstream 171074 11575473 ~ 11576057 (-)
LOC120547228 LOC104952422,LOC104931204 coding downstream 198781 11546186 ~ 11548350 (-)
tshr tshr coding upstream 145941 11893534 ~ 11918141 (-)
nrxn3b LOC102203786,LOC101486071,LOC103457817 coding upstream 279955 12027548 ~ 12358231 (-)
trnat-ugu_2 NA coding upstream 835576 12583169 ~ 12583241 (-)
ccnk ccnk coding upstream 948344 12695937 ~ 12703184 (-)
LOC120546273 NA coding upstream 998793 12746386 ~ 12747738 (-)
G183747 NA non-coding downstream 47166 11699052 ~ 11699965 (-)
G183734 NA non-coding downstream 87558 11659054 ~ 11659573 (-)
G183732 NA non-coding downstream 88169 11658438 ~ 11658962 (-)
G183720 brms1l,LOC103358934 non-coding downstream 156571 11586036 ~ 11590560 (-)
G183685 NA non-coding downstream 203066 11540514 ~ 11544065 (-)
G183781 NA non-coding upstream 40408 11788001 ~ 11788321 (-)
G183788 NA non-coding upstream 119568 11867161 ~ 11869156 (-)
G183792 NA non-coding upstream 136984 11884577 ~ 11886506 (-)
G183813 NA non-coding upstream 255124 12002717 ~ 12025499 (-)
G183870 NA non-coding upstream 732940 12480533 ~ 12480930 (-)
G183650 NA other downstream 372516 11374108 ~ 11374615 (-)
LOC120546776 NA other downstream 1136506 10455244 ~ 10610625 (-)
G183528 NA other downstream 1225721 10520717 ~ 10521410 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other downstream 1646070 10099478 ~ 10101061 (-)
G183176 NA other downstream 2613659 9129573 ~ 9133472 (-)
ost4 NA other upstream 1159709 12907302 ~ 12908747 (-)
LOC120547209 NA other upstream 1212905 12960498 ~ 13007868 (-)
hmgn3 hmgn3,LOC104958971 other upstream 1397871 13145464 ~ 13215900 (-)
runx2b runx2,LOC102312376 other upstream 1508292 13255885 ~ 13303784 (-)
fkbp1b fkbp1b other upstream 1711009 13458602 ~ 13468065 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_033739 NA non-coding NC_007118.7 CM002891.2 26199414 ~ 26213850 (+)