ches1 (foxn3)


Basic Information

Item Value
gene id ches1
gene name foxn3
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 11764143 ~ 11869192 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU248838
TTTCAAAGACACGTCTTCAGGGAGGAGCGTGGGAGATCACTCTACCACGAGAGGCCCGAGGGTGCCACCTCTGGGCTTCGGGTTCAGGCTACATGTAGGCCAGCTGAATCACCTCTTAGGGGTGGGCTTCCGTCTTCTTCTGCCTGTACAGTGATTTTTAGGTGTTCAGTGTTTAACCCCAGTGTTATTTCAGAACACatgtgtagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtttgtgtgtccAGGAACACACACCCTTTAACAttgtgcctgcctgcctgccctcAGTACCTCTGTTGTCATGTCTATGACATGTTTAGACAGAACGTTTTCTTGTCTTTATTTATAACAGTATtgtttcttctttattttttatttttttctttctcctgtgtgtaaatgtacacgTGTCCTTATTTTCCATCGACATTGTTCAGTGTAAATTTATGGATTAGACGGGCTGTCCGGAAAGAACCTCATATCTCCTAATAGGCTACTTAAGAGTTGGattgaaaagaaagaggaatgTAGGAGATGgcataaatgacaaaaaaaaaaaaacaacgtttttttattattatttacatacagtattgttAACCCTTTGATTAAAGGAATTACTTCCCGTCGTGGATGTCAAGCTTGCATACATATGTATCTCAAGTGCCCAATCTGGAGATCAGACGggtattattttcttttcttttaaatagaTTTTGCCACTCTACACAGTTGTAGGTGTATGTCATGAAAACACTGACTTGATTGAAATCCACGAGGGCAGTAGCGAGCTTTGACATTTTTGCATCAGAAGTGATATGAATTCTGCACTGCCATTACTCGGCATGCTTTTGGTGAAACAGGAATGCATAAAAGTATTAATCCCCCGCCCCCCAACACCCCCCTCCACTTGCAGAGATGCAGTCCATATAAAAAAAGCAGCTTTGTAGGAACAAACATAGGCTGGGTTTGGTTGTAGCAGCAGTCAGacaagatttttattttttttttttttttttttaagctcaaTAGACGTTGAGTGATTGTCAAGCGAGCCAAGCAGGCAAAGAAATGCATGTCCCATCCGCTGGTACAGTCTTTTGCCACCTGTAGCATGCATTTTGTATGGTATCCATGCCgacatatattaaaaaaaaggctaaaaGGAGACACCGTCAGTGTTCTTGTTGTGTGCCATCCGTGTCTCGTCTGATATCTGTCTGAGTGCTCCCGCGGCCCGGGTCAAGCACTCCGCTGTATTCGCAGCAACAACCCACTGTTGTGGTGACTAATAACGTGTTCAGCTGGCAAGAGGCATGTGGAGGGGAGAATGTGTTGCTTTAGCAaccacctttttattttatttttttattttttttctctgactCACCCAATGACATGCAGGGAAGATGAACTCCTGACCTACGAGTCCTGGAAAAATCAGAGcaacacatataatatataccTTGGACATTTTAAAGCAAAGAAGGAAACTTCACTGCCTGAAAAAGCCCCCTAAAACAAGTGTTTGTTTCAAACCTGCCAAACATATACAATGAAACgctcaaaaaaatttaaatttaaaaaaaaaaattttttaaaatacagttgccatttttttatgttgatgtttttatgctcattttctgtttttggtTTCTCTCTGACAAAATGATCTACAATActgccattatttttttttttttttaaatttggtgaCTGTCTGAGCTGAATTTTTTGGAAAGCCATAGGTTATAGAGATGTCAAAATGCAAAACTGTTATTGATCTGTGAGATGTGACGCAGAGTGCACCCCGGGTGTCGGTTTCTTTTTACAGTAAATGTTCAATTCTCTCCTTATTGTGCAATCATATTGCCAAAGAATGATTTCAAGACCTATTTCATCACTACATGTAAATATCAACGTTGTCCAATACCgtggcaaaaaatatataaatgttgttttattttgttttccattttctgAAAAACTGCAATGATGTTTATGTGATGTATTGTCTTCCAGTTGGttgcaataataaaaaatacaagttGCAGAAGATTA
>TU248839
TTTCAAAGACACGTCTTCAGGGAGGAGCGTGGGAGATCACTCTACCACGAGAGGCCCGAGGGTGCCACCTCTGGGCTTCGGGTTCAGGCTACATGTAGGCCAGCTGAATCACCTCTTAGGGGTGGGCTTCCGTCTTCTTCTGCCTGTACAGTGATTTTTAGGTGTTCAGTGTTTAACCCCAGTGTTATTTCAGAACACatgtgtagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtttgtgtgtccAGGAACACACACCCTTTAACAttgtgcctgcctgcctgccctcAGTACCTCTGTTGTCATGTCTATGACATGTTTAGACAGAACGTTTTCTTGTCTTTATTTATAACAGTATtgtttcttctttattttttatttttttctttctcctgtgtgtaaatgtacacgTGTCCTTATTTTCCATCGACATTGTTCAGTGTAAATTTATGGATTAGACGGGCTGTCCGGAAAGAACCTCATATCTCCTAATAGGCTACTTAAGAGTTGGattgaaaagaaagaggaatgTAGGAGATGgcataaatgacaaaaaaaaaaaaacaacgtttttttattattatttacatacagtattgttAACCCTTTGATTAAAGGAATTACTTCCCGTCGTGGATGTCAAGCTTGCATACATATGTATCTCAAGTGCCCAATCTGGAGATCAGACGggtattattttcttttcttttaaatagaTTTTGCCACTCTACACAGTTGTAGGTGTATGTCATGAAAACACTGACTTGATTGAAATCCACGAGGGCAGTAGCGAGCTTTGACATTTTTGCATCAGAAGTGATATGAATTCTGCACTGCCATTACTCGGCATGCTTTTGGTGAAACAGGAATGCATAAAAGTATTAATCCCCCGCCCCCCAACACCCCCCTCCACTTGCAGAGATGCAGTCCATATAAAAAAAGCAGCTTTGTAGGAACAAACATAGGCTGGGTTTGGTTGTAGCAGCAGTCAGacaagatttttattttttttttttttttttttaagctcaaTAGACGTTGAGTGATTGTCAAGCGAGCCAAGCAGGCAAAGAAATGCATGTCCCATCCGCTGGTACAGTCTTTTGCCACCTGTAGCATGCATTTTGTATGGTATCCATGCCgacatatattaaaaaaaaggctaaaaGGAGACACCGTCAGTGTTCTTGTTGTGTGCCATCCGTGTCTCGTCTGATATCTGTCTGAGTGCTCCCGCGGCCCGGGTCAAGCACTCCGCTGTATTCGCAGCAACAACCCACTGTTGTGGTGACTAATAACGTGTTCAGCTGGCAAGAGGCATGTGGAGGGGAGAATGTGTTGCTTTAGCAaccacctttttattttatttttttattttttttctctgactCACCCAATGACATGCAGGGAAGATGAACTCCTGACCTACGAGTCCTGGAAAAATCAGAGcaacacatataatatataccTTGGACATTTTAAAGCAAAGAAGGAAACTTCACTGCCTGAAAAAGCCCCCTAAAACAAGTGTTTGTTTCAAACCTGCCAAACATATACAATGAAACgctcaaaaaaatttaaatttaa
>TU248840
TTTCAAAGACACGTCTTCAGGGAGGAGCGTGGGAGATCACTCTACCACGAGAGGCCCGAGGGTGCCACCTCTGGGCTTCGGGTTCAGGCTACATGTAGGCCAGCTGAATCACCTCTTAGGGGTGGGCTTCCGTCTTCTTCTGCCTGTACAGTGATTTTTAGGTGTTCAGTGTTTAACCCCAGTGTTATTTCAGAACACatgtgtagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtttgtgtgtccAGGAACACACACCCTTTAACAttgtgcctgcctgcctgccctcAGTACCTCTGTTGTCATGTCTATGACATGTTTAGACAGAACGTTTTCTTGTCTTTATTTATAACAGTATtgtttcttctttattttttatttttttctttctcctgtgtgtaaatgtacacgTGTCCTTATTTTCCATCGACATTGTTCAGTGTAAATTTATGGATTAGACGGGCTGTCCGGAAAGAACCTCATATCTCCTAATAGGCTACTTAAGAGTTGGattgaaaagaaagaggaatgTAGGAGATGgcataaatgacaaaaaaaaaaaaacaacgtttttttattattatttacatacagtattgttAACCCTTTGATTAAAGGAATTACTTCCCGTCGTGGATGTCAAGCTTGCATACATATGTATCTCAAGTGCCCAATCTGGAGATCAGACGggtattattttcttttcttttaaatagaTTTTGCCACTCTACACAGTTGTAGGTGTATGTCATGAAAACACTGACTTGATTGAAATCCACGAGGGCAGTAGCGAGCTTTGACATTTTTGCATCAGAAGTGATATGAATTCTGCACTGCCATTACTCGGCATGCTTTTGGTGAAACAGGAATGCATAAAAGTATTAATCCCCCGCCCCCCAACACCCCCCTCCACTTGCAGAGATGCAGTCCATATAAAAAAAGCAGCTTTGTAGGAACAAACATAGGCTGGGTTTGGTTGTAGCAGCAGTCAGacaagatttttattttttttttttttttttttaagctcaaTAGACGTTGAGTGATTGTCAAGCGAGCCAAGCAGGCAAAGAAATGCATGTCCCATCCGCTGGTACAGTCTTTTGCCACCTGTAGCATGCATTTTGTATGGTATCCATGCCgacatatattaaaaaaaaggctaaaaGGAGACACCGTCAGTGTTCTTGTTGTGTGCCATCCGTGTCTCGTCTGATATCTGTCTGAGTGCTCCCGCGGCCCGGGTCAAGCACTCCGCTGTATTCGCAGCAACAACCCACTGTTGTGGTGACTAATAACGTGTTCAGCTGGCAAGAGGCATGTGGAGGGGAGAATGTGTTGCTTTAGCAaccacctttttattttatttttttattttttttctctgactCACCCAATGACATGCAGGGAAGATGAACTCCTGACCTACGAGTCCTGGAAAAATCAGAGcaacacatataatatataccTTGGACATTTTAAAGCAAAGAAGGAAACTTCACTGCCTGAAAAAGCCCCCTAAAACAAGTGTTTGTTTCAAACCTGCCAAACATATACAATGAAACgctcaaaaaaatttaaatttaaaaaaaaaaattttttaaaatacagttgccatttttttatgttgatgtttttatgctcattttctgtttttggtTTCTCTCTGACAAAATGATCTACAATActgccattatttttttttttttttaaatttggtgaCTGTCTGAGCTGAATTTTTTGGAAAGCCATAGGTTATAGAGATGTCAAAATGCAAAACTGTTATTGATCTGTGAGATGTGACGCAGAGTGCACCCCGGGTGTCGGTTTCTTTTTACAGTAAATGTTCAATTCTCTCCTTATTGTGCAATCATATTGCCAAAGAATGATTTCAAGACCTATTTCATCACTACATGTAAATATCAACGTTGTCCAATACCgtggcaaaaaatatataaatgttgttttattttgttttccattttctgAAAAA
>XM_039781260.1
acgcacacaagcacacacaaacacacacactcaccgaGCTCTTCTccgacagaggagagagagagagagagagagcgctgaGGGATAAACGGAGGGAGAGACTATAGGAACGCAgcggcttgtgtgtgtgtgtgtatgtgtgtgtgcgcgcgcgtgtgaaGGTACGCTCGCTCGGTGGCAGAAACGACTGGCGGGGCGGATATGGAGGGGCTCGGGAAAAACGCTGGGAACTGACCGAGCACCGAGACGataaggggggagagagaagagagagaggaaggacggacggacggacgcaCAGAacggaaggagggaaggaaggaaggaaaggaggagaggaggagagagagaagtctgacagaggagaggaagagtgtGAAGAAGGGGCTCGTCTGGAACGCAGAAGGATCCAAAGGAGTGAGCCCGGGGCTGGATGGGACCCACCATGCCCCCCAGTAAGAAGGCCCAGAGCCCCAGCAGTGGAGCCAGTGCCTCACAGGGCATGAGCCCGCCGTATCGGCAGGGGGACGCCGCCACAGCGGCGTCGGAGGCCGAGGCGGCCGACCTCTCGCTGTCCGTGTCCGCCTCCTTCTCCAAGGCCGAGGACGAGGAGCTCACCAGCCTCTCCTGGCTCCACGAGAGCACCGACCTGCTCAACAGCTTCAGCCACTCGGGGCTGCGCAGCGTCTCGCCCCTGCAGGACCCCGACGGTCAGCACCCGCGCTCTCCCTCCTCGTCTCCCTCCCCGGACGACCCCCTGCTCAGCGACGCGCACTCGGCGTACGACTTGGCGGCAGGGGGCAACAGGAAACCGCCCTACTCCTTCAGCTGTCTGATCTTCATGGCCATCGAGGACGCGCCAAACAAGCGGCTGCCGGTGAAGGATATCTACGGCTGGATCCTGGAGCACTTCCCTTACTTTGCGAGCGCCCCCACCGGCTGGAAGAACTCCGTGCGCCACAATCTGTCGCTCAACAAGTGCTTCAAGAAGGTGGATAAAGACCGCAGCCAGagcATAGGCAAAGGCTCTCTGTGGTCCATAGATCCGGAGTATAGGCACAACCTGATCCAGGCGCTGAAGAAGACGCCGTACCATCCCTACTCGCCCGGCCTGGCCGCGCCCTCCACCTCCCCACCCACCCTGCCTCAGACATTTCACCAGAGTCCTCCATTGTGGTCGGGGAGTCCCCTCTTCAGAAAGAACGGAGGAGTTCTCCTACAAGttCCTCGTGGTGTGATCCAAAATGGCGCCCGTATCCGGAGCCAGGCCCTCTTCCCTGTGATCAGACCCCTACCTGTTAGCCCAGTGGGGAGTAGGACCTCGGCCATACGCTCATCCCTGGGAGATTATCTAAGCCGGGAACAGGACAGCCCGTCCCGCTACTCTCCTCCGCTCTGCAGCGAGGACCTCCAGGACGACCACACCTACAGCACGGCCAAATCCCCCAGCAGGCTGTGCTCCTCCGAAGTCGGCACCCCTTCCTCCCCTCTGGACGACGACGACGACATCATCGCCGTGGAGATCCAGTCGGACGTTAAACCCGAGCCCCGGGAGATCCCGCTGGATTCTCACCTCGCCGCGGCCCCCGCTACCTACGTTTCCCAGCAGCCCCCGCGCGGACAGAGACGCAGTACGGGGCCGGGCGCGGGGACTCTGGCGGGAAGCAGTTTGCCCTGGACCAAAAACCGAGCGCGCGGCCTCAGCGACACGCTGCCGCTGAAGAAGCGGCGCGCGGCGGCGGTGGAGAAGCCGCCGGAGAGCGACGACGAGGAGATGAAGGAGGCGGCGGGGTCGCTGCTCCACCTGGCGGGGGTCAGAGCCTGCCTCAACAACATCACAAACCGCACCGCCAAGGGCCAGAAGGAGCAGAAAGAGGCCCTGAGAaactaagacacacacacacacacatagaacacGCACATAGTcacgcaaaaacacacacacacacacagacggtaTACAGCTCACAGCACACACAcgttaacacacagacacatatacaataCACAAATAGGTCAACAGGTAACGTTACTACAGCATTAGTCTCAATGGACACTTCTCATCTCCCTCTATCTATCTGCAGGGCATTAGGTGAATCCTACTTATTTGTGGCAATATCAAAAATCTATGTTTTCCTACATGTTCAGCAACACTAACATCAATGGGTATTTCTCATGTGTCtttgttgtttctgttgtttaAAAAAGGGGATGAAAGCCATAAAAGGAAAGCACGTTTTTGTCACTAATTTGGACAAGTTGAGCACGACAAGACCCCAAAATCACATTGAGGAGCGCACAGTGCATAAACACAGACGATGGCTGTTTGTCGTACCTGTTTGTTTTCTATGTGAATCTGTAGCAATCTCGCAGCGAcgccagcaaaaaaaaaaaaaaacgggcgGCAGGGCCTAACGCGACGAGACGCGGCGCTCTCTCGGGCCCGCGCGCTGgcatccctctctcctccatccACGAGCACAAATGTGAGACTGTGCCAAAGATAAAGCGACCAGGTTGCTTCATGTAGCCGACACGAcagctgacaaaaaaaaaaatatatatataaaaaaaataaaataaaccaagAAGGCGTAGTAGTAAAGAAGAGCTAAGGGAGAATGACCTAAAGCGTCGAAATAATTGTAAAACCCAATGTGATATATATTCATGCACTTAAGATTATTTAACACCACTTATAATAGAAGCATCATGGGTAAGGACATGGTTTATTTCAAGAGCACTCATAGTATTTAAGAATAgatattttaaaatttaaaaaaaacaacaaaaaaaaaatggtcatgTTTATCACCATAAAGATGGATAGTGTGCCGGGTCTGAGGCAATATCTCcttcattttgttgttgttgttgcataaTGTAAACTCCCCCAGTACTTCTGTCCATAGACGTACAGTAGACACCTGGTATAGATATCATAGCTGCCAGTAGCTACCACACCTTCCTCTTCATTTTGACGACGTCAAAGAACTATATACATGAACTGTGGGTTTTAACgatttctgtttgtgtctgtttgaacCCTCACTCTACCCTCATAAAGATATAAGCAATTTGTCCCGCGCGGACAACTCTGTAAAAAGGttagaaaatattttatttttttcctttcttaatTGAAGCAATTTGACCTGCAGGACTTTCTCAGTTATATTGCATGGGTGCTTGTAAATAAGATAAAAAGCAAATCTTTTTTATTCAAAGATCATGTAAGATAAACGATGTATTTAGCATGAAGCATGACTTATTTTCATATAAACATTGATCctagaggaaagaaaaaaagttttgccGCCAATTCTTATACCCGTGGTTATATTggattctttttctttttttttttatttttgaatcttttgggttctttttttttttttttgagcggGCTTTCAAAGACACGTCTTCAGGGAGGAGCGTGGGAGATCACTCTACCACGAGAGGCCCGAGGGTGCCACCTCTGGGCTTCGGGTTCAGGCTACATGTAGGCCAGCTGAATCACCTCTTAGGGGTGGGCTTCCGTCTTCTTCTGCCTGTACAGTGATTTTTAGGTGTTCAGTGTTTAACCCCAGTGTTATTTCAGAACACatgtgtagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtttgtgtgtccAGGAACACACACCCTTTAACAttgtgcctgcctgcctgccctcAGTACCTCTGTTGTCATGTCTATGACATGTTTAGACAGAACGTTTTCTTGTCTTTATTTATAACAGTATtgtttcttctttattttttatttttttctttctcctgtgtgtaaatgtacacgTGTCCTTATTTTCCATCGACATTGTTCAGTGTAAATTTATGGATTAGACGGGCTGTCCGGAAAGAACCTCATATCTCCTAATAGGCTACTTAAGAGTTGGattgaaaagaaagaggaatgTAGGAGATGgcataaatgacaaaaaaaaaaaaacaacgtttttttattattatttacatacagtattgttAACCCTTTGATTAAAGGAATTACTTCCCGTCGTGGATGTCAAGCTTGCATACATATGTATCTCAAGTGCCCAATCTGGAGATCAGACGggtattattttcttttcttttaaatagaTTTTGCCACTCTACACAGTTGTAGGTGTATGTCATGAAAACACTGACTTGATTGAAATCCACGAGGGCAGTAGCGAGCTTTGACATTTTTGCATCAGAAGTGATATGAATTCTGCACTGCCATTACTCGGCATGCTTTTGGTGAAACAGGAATGCATAAAAGTATTAATCCCCCGCCCCCCAACACCCCCCTCCACTTGCAGAGATGCAGTCCATATAAAAAAAGCAGCTTTGTAGGAACAAACATAGGCTGGGTTTGGTTGTAGCAGCAGTCAGacaagatttttattttttttttttttttttttaagctcaaTAGACGTTGAGTGATTGTCAAGCGAGCCAAGCAGGCAAAGAAATGCATGTCCCATCCGCTGGTACAGTCTTTTGCCACCTGTAGCATGCATTTTGTATGGTATCCATGCCgacatatattaaaaaaaaggctaaaaGGAGACACCGTCAGTGTTCTTGTTGTGTGCCATCCGTGTCTCGTCTGATATCTGTCTGAGTGCTCCCGCGGCCCGGGTCAAGCACTCCGCTGTATTCGCAGCAACAACCCACTGTTGTGGTGACTAATAACGTGTTCAGCTGGCAAGAGGCATGTGGAGGGGAGAATGTGTTGCTTTAGCAaccacctttttattttatttttttattttttttctctgactCACCCAATGACATGCAGGGAAGATGAACTCCTGACCTACGAGTCCTGGAAAAATCAGAGcaacacatataatatataccTTGGACATTTTAAAGCAAAGAAGGAAACTTCACTGCCTGAAAAAGCCCCCTAAAACAAGTGTTTGTTTCAAACCTGCCAAACATATACAATGAAACgctcaaaaaaatttaaatttaaaaaaaaaaattttttaaaatacagttgccatttttttatgttgatgtttttatgctcattttctgtttttggtTTCTCTCTGACAAAATGATCTACAATActgccattatttttttttttttttaaatttggtgaCTGTCTGAGCTGAATTTTTTGGAAAGCCATAGGTTATAGAGATGTCAAAATGCAAAACTGTTATTGATCTGTGAGATGTGACGCAGAGTGCACCCCGGGTGTCGGTTTCTTTTTACAGTAAATGTTCAATTCTCTCCTTATTGTGCAATCATATTGCCAAAGAATGATTTCAAGACCTATTTCATCACTACATGTAAATATCAACGTTGTCCAATACCgtggcaaaaaatatataaatgttgttttattttgttttccattttctgAAAAACTGCAATGATGTTTATGTGATGTATTGTCTTCCAGTTGGttgcaataataaaaaatacaagttGCA
>XM_039781262.1
GGAGGCTTGCCAGGGAGCTAACCAGCTAAGAAGAAACTCCATGAAAAAAGGACAAGAAAAAACTCGTCTGCCTGCACCTCGTCTCTTGCACCAAGCTAACACGCCCCAGACATGGTCTCCACCGAATTCATAAAGAAGAAATTGTTATCAACTCTCATTCAACTCCTGAGTGACTATAGGGCCTTGACCAACACTCAACACTACCCTCAGCTGCTACAGCATCTTTCAGAGTGAGCCCGGGGCTGGATGGGACCCACCATGCCCCCCAGTAAGAAGGCCCAGAGCCCCAGCAGTGGAGCCAGTGCCTCACAGGGCATGAGCCCGCCGTATCGGCAGGGGGACGCCGCCACAGCGGCGTCGGAGGCCGAGGCGGCCGACCTCTCGCTGTCCGTGTCCGCCTCCTTCTCCAAGGCCGAGGACGAGGAGCTCACCAGCCTCTCCTGGCTCCACGAGAGCACCGACCTGCTCAACAGCTTCAGCCACTCGGGGCTGCGCAGCGTCTCGCCCCTGCAGGACCCCGACGGTCAGCACCCGCGCTCTCCCTCCTCGTCTCCCTCCCCGGACGACCCCCTGCTCAGCGACGCGCACTCGGCGTACGACTTGGCGGCAGGGGGCAACAGGAAACCGCCCTACTCCTTCAGCTGTCTGATCTTCATGGCCATCGAGGACGCGCCAAACAAGCGGCTGCCGGTGAAGGATATCTACGGCTGGATCCTGGAGCACTTCCCTTACTTTGCGAGCGCCCCCACCGGCTGGAAGAACTCCGTGCGCCACAATCTGTCGCTCAACAAGTGCTTCAAGAAGGTGGATAAAGACCGCAGCCAGagcATAGGCAAAGGCTCTCTGTGGTCCATAGATCCGGAGTATAGGCACAACCTGATCCAGGCGCTGAAGAAGACGCCGTACCATCCCTACTCGCCCGGCCTGGCCGCGCCCTCCACCTCCCCACCCACCCTGCCTCAGACATTTCACCAGAGTCCTCCATTGTGGTCGGGGAGTCCCCTCTTCAGAAAGAACGGAGGAGTTCTCCTACAAGttCCTCGTGGTGTGATCCAAAATGGCGCCCGTATCCGGAGCCAGGCCCTCTTCCCTGTGATCAGACCCCTACCTGTTAGCCCAGTGGGGAGTAGGACCTCGGCCATACGCTCATCCCTGGGAGATTATCTAAGCCGGGAACAGGACAGCCCGTCCCGCTACTCTCCTCCGCTCTGCAGCGAGGACCTCCAGGACGACCACACCTACAGCACGGCCAAATCCCCCAGCAGGCTGTGCTCCTCCGAAGTCGGCACCCCTTCCTCCCCTCTGGACGACGACGACGACATCATCGCCGTGGAGATCCAGTCGGACGTTAAACCCGAGCCCCGGGAGATCCCGCTGGATTCTCACCTCGCCGCGGCCCCCGCTACCTACGTTTCCCAGCAGCCCCCGCGCGGACAGAGACGCAGTACGGGGCCGGGCGCGGGGACTCTGGCGGGAAGCAGTTTGCCCTGGACCAAAAACCGAGCGCGCGGCCTCAGCGACACGCTGCCGCTGAAGAAGCGGCGCGCGGCGGCGGTGGAGAAGCCGCCGGAGAGCGACGACGAGGAGATGAAGGAGGCGGCGGGGTCGCTGCTCCACCTGGCGGGGGTCAGAGCCTGCCTCAACAACATCACAAACCGCACCGCCAAGGGCCAGAAGGAGCAGAAAGAGGCCCTGAGAaactaagacacacacacacacacatagaacacGCACATAGTcacgcaaaaacacacacacacacacagacggtaTACAGCTCACAGCACACACAcgttaacacacagacacatatacaataCACAAATAGGTCAACAGGTAACGTTACTACAGCATTAGTCTCAATGGACACTTCTCATCTCCCTCTATCTATCTGCAGGGCATTAGGTGAATCCTACTTATTTGTGGCAATATCAAAAATCTATGTTTTCCTACATGTTCAGCAACACTAACATCAATGGGTATTTCTCATGTGTCtttgttgtttctgttgtttaAAAAAGGGGATGAAAGCCATAAAAGGAAAGCACGTTTTTGTCACTAATTTGGACAAGTTGAGCACGACAAGACCCCAAAATCACATTGAGGAGCGCACAGTGCATAAACACAGACGATGGCTGTTTGTCGTACCTGTTTGTTTTCTATGTGAATCTGTAGCAATCTCGCAGCGAcgccagcaaaaaaaaaaaaaaacgggcgGCAGGGCCTAACGCGACGAGACGCGGCGCTCTCTCGGGCCCGCGCGCTGgcatccctctctcctccatccACGAGCACAAATGTGAGACTGTGCCAAAGATAAAGCGACCAGGTTGCTTCATGTAGCCGACACGAcagctgacaaaaaaaaaaatatatatataaaaaaaataaaataaaccaagAAGGCGTAGTAGTAAAGAAGAGCTAAGGGAGAATGACCTAAAGCGTCGAAATAATTGTAAAACCCAATGTGATATATATTCATGCACTTAAGATTATTTAACACCACTTATAATAGAAGCATCATGGGTAAGGACATGGTTTATTTCAAGAGCACTCATAGTATTTAAGAATAgatattttaaaatttaaaaaaaacaacaaaaaaaaaatggtcatgTTTATCACCATAAAGATGGATAGTGTGCCGGGTCTGAGGCAATATCTCcttcattttgttgttgttgttgcataaTGTAAACTCCCCCAGTACTTCTGTCCATAGACGTACAGTAGACACCTGGTATAGATATCATAGCTGCCAGTAGCTACCACACCTTCCTCTTCATTTTGACGACGTCAAAGAACTATATACATGAACTGTGGGTTTTAACgatttctgtttgtgtctgtttgaacCCTCACTCTACCCTCATAAAGATATAAGCAATTTGTCCCGCGCGGACAACTCTGTAAAAAGGttagaaaatattttatttttttcctttcttaatTGAAGCAATTTGACCTGCAGGACTTTCTCAGTTATATTGCATGGGTGCTTGTAAATAAGATAAAAAGCAAATCTTTTTTATTCAAAGATCATGTAAGATAAACGATGTATTTAGCATGAAGCATGACTTATTTTCATATAAACATTGATCctagaggaaagaaaaaaagttttgccGCCAATTCTTATACCCGTGGTTATATTggattctttttctttttttttttatttttgaatcttttgggttctttttttttttttttgagcggGCTTTCAAAGACACGTCTTCAGGGAGGAGCGTGGGAGATCACTCTACCACGAGAGGCCCGAGGGTGCCACCTCTGGGCTTCGGGTTCAGGCTACATGTAGGCCAGCTGAATCACCTCTTAGGGGTGGGCTTCCGTCTTCTTCTGCCTGTACAGTGATTTTTAGGTGTTCAGTGTTTAACCCCAGTGTTATTTCAGAACACatgtgtagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtttgtgtgtccAGGAACACACACCCTTTAACAttgtgcctgcctgcctgccctcAGTACCTCTGTTGTCATGTCTATGACATGTTTAGACAGAACGTTTTCTTGTCTTTATTTATAACAGTATtgtttcttctttattttttatttttttctttctcctgtgtgtaaatgtacacgTGTCCTTATTTTCCATCGACATTGTTCAGTGTAAATTTATGGATTAGACGGGCTGTCCGGAAAGAACCTCATATCTCCTAATAGGCTACTTAAGAGTTGGattgaaaagaaagaggaatgTAGGAGATGgcataaatgacaaaaaaaaaaaaacaacgtttttttattattatttacatacagtattgttAACCCTTTGATTAAAGGAATTACTTCCCGTCGTGGATGTCAAGCTTGCATACATATGTATCTCAAGTGCCCAATCTGGAGATCAGACGggtattattttcttttcttttaaatagaTTTTGCCACTCTACACAGTTGTAGGTGTATGTCATGAAAACACTGACTTGATTGAAATCCACGAGGGCAGTAGCGAGCTTTGACATTTTTGCATCAGAAGTGATATGAATTCTGCACTGCCATTACTCGGCATGCTTTTGGTGAAACAGGAATGCATAAAAGTATTAATCCCCCGCCCCCCAACACCCCCCTCCACTTGCAGAGATGCAGTCCATATAAAAAAAGCAGCTTTGTAGGAACAAACATAGGCTGGGTTTGGTTGTAGCAGCAGTCAGacaagatttttattttttttttttttttttttaagctcaaTAGACGTTGAGTGATTGTCAAGCGAGCCAAGCAGGCAAAGAAATGCATGTCCCATCCGCTGGTACAGTCTTTTGCCACCTGTAGCATGCATTTTGTATGGTATCCATGCCgacatatattaaaaaaaaggctaaaaGGAGACACCGTCAGTGTTCTTGTTGTGTGCCATCCGTGTCTCGTCTGATATCTGTCTGAGTGCTCCCGCGGCCCGGGTCAAGCACTCCGCTGTATTCGCAGCAACAACCCACTGTTGTGGTGACTAATAACGTGTTCAGCTGGCAAGAGGCATGTGGAGGGGAGAATGTGTTGCTTTAGCAaccacctttttattttatttttttattttttttctctgactCACCCAATGACATGCAGGGAAGATGAACTCCTGACCTACGAGTCCTGGAAAAATCAGAGcaacacatataatatataccTTGGACATTTTAAAGCAAAGAAGGAAACTTCACTGCCTGAAAAAGCCCCCTAAAACAAGTGTTTGTTTCAAACCTGCCAAACATATACAATGAAACgctcaaaaaaatttaaatttaaaaaaaaaaattttttaaaatacagttgccatttttttatgttgatgtttttatgctcattttctgtttttggtTTCTCTCTGACAAAATGATCTACAATActgccattatttttttttttttttaaatttggtgaCTGTCTGAGCTGAATTTTTTGGAAAGCCATAGGTTATAGAGATGTCAAAATGCAAAACTGTTATTGATCTGTGAGATGTGACGCAGAGTGCACCCCGGGTGTCGGTTTCTTTTTACAGTAAATGTTCAATTCTCTCCTTATTGTGCAATCATATTGCCAAAGAATGATTTCAAGACCTATTTCATCACTACATGTAAATATCAACGTTGTCCAATACCgtggcaaaaaatatataaatgttgttttattttgttttccattttctgAAAAACTGCAATGATGTTTATGTGATGTATTGTCTTCCAGTTGGttgcaataataaaaaatacaagttGCA

Function

symbol description
foxn3 Predicted to enable DNA-binding transcription factor activity and cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be active in nucleus. Is expressed in female organism and male organism. Orthologous to human FOXN3 (forkhead box N3).

NR:

description
PREDICTED: forkhead box protein N3 isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K09407 FOXN; forkhead box protein N

RNA

RNA id representative length rna type GC content exon number start site end site
TU248838 False 2090 lncRNA 0.39 1 11867103 11869192
TU248839 False 1610 lncRNA 0.41 1 11867103 11868712
TU248840 False 2016 lncRNA 0.39 1 11867103 11869118
XM_039781260.1 True 5493 mRNA 0.47 6 11801985 11869184
XM_039781262.1 False 5306 mRNA 0.46 7 11764143 11869184

Neighbor

gene id symbol gene type direction distance location
LOC120547096 brms1l,LOC103358934,LOC100691440,LOC101472597,LOC102200527,LOC103380712 coding upstream 173597 11578169 ~ 11590546 (+)
LOC120547310 psma6,LOC103358936,LOC105930638,LOC102217550,LOC103457804,LOC107095481,LOC106935624 coding upstream 220165 11536311 ~ 11543978 (+)
LOC120547014 LOC103358937 coding upstream 254764 11499969 ~ 11509379 (+)
flrt2 LOC104961132,LOC103360508 coding upstream 557776 11032427 ~ 11206367 (+)
LOC120547319 NA coding upstream 989160 10770950 ~ 10774983 (+)
gtf2a1 gtf2a1 coding downstream 3784 11872976 ~ 11886364 (+)
LOC120546813 cep128 coding downstream 20804 11889996 ~ 12003884 (+)
snw1 snw1,LOC102781075 coding downstream 644408 12513600 ~ 12526139 (+)
sptlc2b sptlc2,LOC103357434,LOC100704591 coding downstream 671403 12540595 ~ 12559204 (+)
ism2b ism2,LOC104967641 coding downstream 691106 12560298 ~ 12574350 (+)
G183735 NA non-coding upstream 104252 11659672 ~ 11659891 (+)
G183711 psmc1,psmc1b non-coding upstream 114138 11647337 ~ 11650005 (+)
G183709 psmc1a,psmc1 non-coding upstream 119298 11638856 ~ 11644845 (+)
G183700 calm1,LOC107396020,LOC102778633,LOC102293206,LOC103380713 non-coding upstream 129739 11568285 ~ 11634404 (+)
G183696 NA non-coding upstream 206350 11557524 ~ 11557793 (+)
G183762 NA non-coding downstream 17403 11886595 ~ 11887137 (+)
G183825 NA non-coding downstream 305387 12174579 ~ 12178850 (+)
G183866 NA non-coding downstream 611115 12480307 ~ 12480529 (+)
G183868 NA non-coding downstream 635493 12504685 ~ 12505123 (+)
G183890 NA non-coding downstream 760097 12629289 ~ 12637536 (+)
G183540 sf3b6,pm14,SF3B6 other upstream 1097671 10622736 ~ 10666472 (+)
cdc42bpab fzd3,LOC103374788 other upstream 1364331 10236949 ~ 10399812 (+)
LOC120546402 NA other upstream 1651508 10111070 ~ 10112635 (+)
il17a/f3 NA other upstream 2161795 9595376 ~ 9602348 (+)
pnocb LOC103362991 other upstream 2259869 9469609 ~ 9504274 (+)
bcl11bb LOC103368061 other downstream 838026 12707218 ~ 12739384 (+)
LOC120546167 NA other downstream 1077807 12946999 ~ 13008411 (+)
G183994 phip other downstream 1276283 13145475 ~ 13247416 (+)
LOC120546706 wdcp other downstream 1599043 13468235 ~ 13474159 (+)
LOC120546742 plcb1 other downstream 2155292 14024484 ~ 14140769 (+)

Expression


Co-expression Network