G183813


Basic Information

Item Value
gene id G183813
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 12002717 ~ 12025499 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU248899
GAACAGATTGGAGGGTCACAACTGATGCCAACACATGGGAGCTGCCTGACTAATGAGCCACTGATGCGACACACCTGAGGCGGACACCAGTGCTGCAAAGGTGGAAAGTTGAGCTGAGAGCCACTGAGGGCACAACTAAGCAGAAAGCTGCTTTACAAAAGACGGTGCAGAAGCTTTTAAAGGACATGTACAGCTGGCACACGCAAAGCTCCAAAACCCCCACAAGCTTGGATTTTGTGAAGCATTAAGCAAGACAATATACCAGTGGGAGAAGCTGGAATCTCTCGGCTGCTGCAAAGtACCGCTGAAGGAGACGTTGTTTCCAGCCAAAACAGTACGAATGCAGAAAATGCATgttatgtacttttttttacaaataaatgtctgactgttttcaaaaaaagaatgcacatcacatgtcagtttctagaaatgtctcatgatatatattgtctctagaagtgtattattcaactttt
>TU248901
CCTGGATCTAGTTTTTGCTTTAGCTAAGTAAGATTAGCTGTGGCTGTCTCGTTTGAtatagcatgttagcattagctgttagtgtgctctctctctctctggcacaGTGCAGTTCCTGCTGTTTGGTTTGGTATTTAGCTCTTTAAAGCTatggtgcgtagtttctgtcgcccccatgacgACTTTTAAGTAAAGACatcaaaactgtcggcgcaccgtccccactcctcctccacccagttgctagtagccaaggaggacacagaggattaaaacaacatggactcttcagaagagATTCAGGAGAGATGCTGTATCCTCCGCGGACCGAAGCAAAGCAGCTGTGAAGGTGATGATGATCAGTCCTGACAGGGAGATAGGCCTCCTACCCAAGCTTGACAGTGTGATTGGATCCAGTGAGAATCCCAATGAAGCAATGAGTATCACAGCGGCAGCTCGCCTCCCCAGGGGCCCCCAACACAGCCAACAGGCCGGCCCCAGCCCTGCCTGTTCAGACCAGATGAAAAGTGAGACGGGATGGGATctgggaagcaaaaaaaaaaaaagGCTGCTTTACAAAAGACGGTGCAGAAGCTTTTAAAGGACATGTACAGCTGGCACACGCAAAGCTCCAAAACCCCCACAAGCTTGGATTTTGTGAAGCATTAAGCAAGACAATATACCAGTGGGAGAAGCTGGAATCTCTCGGCTGCTGCAAAGtACCGCTGAAGGAGACGTTGTTTCCAGCCAAAACAGTACGAATGCAGAAAATGCATgttatgtacttttttttacaaataaatgtctgactgttttcaaaaaaagaatgcacatcacatgtcagtttctagaaatgtctcatgatatatattgtctctagaagtgtattattcaactttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248899 False 479 lncRNA 0.43 4 12002717 12017897
TU248901 True 900 lncRNA 0.46 6 12002717 12025499

Neighbor

gene id symbol gene type direction distance location
tshr tshr coding downstream 84576 11893534 ~ 11918141 (-)
kcnk13b kcnk13,LOC106526329 coding downstream 329628 11659994 ~ 11673089 (-)
LOC120547092 psmc1 coding downstream 352657 11638846 ~ 11650060 (-)
LOC120546716 calm1,LOC107396020,LOC102778633,LOC102293206,LOC103380713 coding downstream 368387 11619704 ~ 11634330 (-)
LOC120546403 NA coding downstream 426660 11575473 ~ 11576057 (-)
nrxn3b LOC102203786,LOC101486071,LOC103457817 coding upstream 2049 12027548 ~ 12358231 (-)
trnat-ugu_2 NA coding upstream 557670 12583169 ~ 12583241 (-)
ccnk ccnk coding upstream 670438 12695937 ~ 12703184 (-)
LOC120546273 NA coding upstream 720887 12746386 ~ 12747738 (-)
LOC120547205 NA coding upstream 921459 12946958 ~ 12948322 (-)
G183792 NA non-coding downstream 116211 11884577 ~ 11886506 (-)
G183788 NA non-coding downstream 133561 11867161 ~ 11869156 (-)
G183781 NA non-coding downstream 214396 11788001 ~ 11788321 (-)
G183753 NA non-coding downstream 255124 11747131 ~ 11747593 (-)
G183747 NA non-coding downstream 302752 11699052 ~ 11699965 (-)
G183870 NA non-coding upstream 455034 12480533 ~ 12480930 (-)
G183872 NA non-coding upstream 479186 12504685 ~ 12505015 (-)
G183875 snw1,LOC102781075 non-coding upstream 492873 12518372 ~ 12521754 (-)
G183898 NA non-coding upstream 515084 12540583 ~ 12559775 (-)
G183910 NA non-coding upstream 562639 12588138 ~ 12630792 (-)
G183650 NA other downstream 628102 11374108 ~ 11374615 (-)
LOC120546776 NA other downstream 1392092 10455244 ~ 10610625 (-)
G183528 NA other downstream 1481307 10520717 ~ 10521410 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other downstream 1901656 10099478 ~ 10101061 (-)
G183176 NA other downstream 2869245 9129573 ~ 9133472 (-)
ost4 NA other upstream 881803 12907302 ~ 12908747 (-)
LOC120547209 NA other upstream 934999 12960498 ~ 13007868 (-)
hmgn3 hmgn3,LOC104958971 other upstream 1119965 13145464 ~ 13215900 (-)
runx2b runx2,LOC102312376 other upstream 1230386 13255885 ~ 13303784 (-)
fkbp1b fkbp1b other upstream 1433103 13458602 ~ 13468065 (-)

Expression


Co-expression Network