Item | Value |
---|---|
gene id | G183875 |
gene name | snw1,LOC102781075 |
gene type | non-coding |
species | eurasian perch (Perca fluviatilis) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_053129.1 |
NCBI id | CM020926.1 |
chromosome length | 36987114 |
location | 12518372 ~ 12521754 (-) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
symbol | description |
---|---|
snw1 | Acts upstream of or within neural crest formation and positive regulation of BMP signaling pathway. Predicted to be located in nucleus. Predicted to be part of spliceosomal complex. Is expressed in ectoderm; mesoderm; and neural plate. Human ortholog(s) of this gene implicated in breast cancer and pancreatic cancer. Orthologous to human SNW1 (SNW domain containing 1). |
description |
---|
PREDICTED: SNW domain-containing protein 1-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU248982 | True | 440 | lncRNA | 0.55 | 4 | 12518372 | 12521754 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
nrxn3b | LOC102203786,LOC101486071,LOC103457817 | coding | downstream | 160141 | 12027548 ~ 12358231 (-) |
tshr | tshr | coding | downstream | 600231 | 11893534 ~ 11918141 (-) |
kcnk13b | kcnk13,LOC106526329 | coding | downstream | 845283 | 11659994 ~ 11673089 (-) |
LOC120547092 | psmc1 | coding | downstream | 868312 | 11638846 ~ 11650060 (-) |
LOC120546716 | calm1,LOC107396020,LOC102778633,LOC102293206,LOC103380713 | coding | downstream | 884042 | 11619704 ~ 11634330 (-) |
trnat-ugu_2 | NA | coding | upstream | 61415 | 12583169 ~ 12583241 (-) |
ccnk | ccnk | coding | upstream | 174183 | 12695937 ~ 12703184 (-) |
LOC120546273 | NA | coding | upstream | 224632 | 12746386 ~ 12747738 (-) |
LOC120547205 | NA | coding | upstream | 425204 | 12946958 ~ 12948322 (-) |
LOC120547206 | NA | coding | upstream | 434719 | 12956473 ~ 12957811 (-) |
G183872 | NA | non-coding | downstream | 13357 | 12504685 ~ 12505015 (-) |
G183870 | NA | non-coding | downstream | 37442 | 12480533 ~ 12480930 (-) |
G183813 | NA | non-coding | downstream | 492873 | 12002717 ~ 12025499 (-) |
G183792 | NA | non-coding | downstream | 631866 | 11884577 ~ 11886506 (-) |
G183788 | NA | non-coding | downstream | 649216 | 11867161 ~ 11869156 (-) |
G183898 | NA | non-coding | upstream | 18829 | 12540583 ~ 12559775 (-) |
G183910 | NA | non-coding | upstream | 66384 | 12588138 ~ 12630792 (-) |
G183908 | NA | non-coding | upstream | 70864 | 12592618 ~ 12626706 (-) |
G183952 | NA | non-coding | upstream | 319278 | 12841032 ~ 12922807 (-) |
LOC120546274 | NA | non-coding | upstream | 362616 | 12884370 ~ 12885775 (-) |
G183650 | NA | other | downstream | 1143757 | 11374108 ~ 11374615 (-) |
LOC120546776 | NA | other | downstream | 1907747 | 10455244 ~ 10610625 (-) |
G183528 | NA | other | downstream | 1996962 | 10520717 ~ 10521410 (-) |
LOC120546281 | LOC107372644,LOC107099224,LOC106591698 | other | downstream | 2417311 | 10099478 ~ 10101061 (-) |
G183176 | NA | other | downstream | 3384900 | 9129573 ~ 9133472 (-) |
ost4 | NA | other | upstream | 385548 | 12907302 ~ 12908747 (-) |
LOC120547209 | NA | other | upstream | 438744 | 12960498 ~ 13007868 (-) |
hmgn3 | hmgn3,LOC104958971 | other | upstream | 623710 | 13145464 ~ 13215900 (-) |
runx2b | runx2,LOC102312376 | other | upstream | 734131 | 13255885 ~ 13303784 (-) |
fkbp1b | fkbp1b | other | upstream | 936848 | 13458602 ~ 13468065 (-) |