LOC120547209


Basic Information

Item Value
gene id LOC120547209
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 12960498 ~ 13007868 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU249125
GCTAACTGAAGCACAGAACACTACCTTATGCATGAATGCTCTTGGAGCTCCCCGGCGGTGTCAGCCCAGCTGGGAGTAAGAACCTTGTACACCAACTCCACTGTAGGGCTGCTGTTGTCCAGTCGCTGAACCACTCTGACTAGCACTCCCCATACTCGCCTGCCTGACGGTGCGATGTCTATAAGGGATGTTCTTGGCCTGCTGAGTGCTGGGATAATTATCCCTTGTGTAGTGAGCATCCTCCCTGCTGTCCCTCCCTTGCTCAAAGCTGTTGCTGGTGTAAGTATACGTGCCTGGAGGATACTGGCCATTCAGGAACATGTAGTCATAGGAAGGGTAAGGATAGGAGACCAGGCCTGATGGCACAGGTCCTCCATTGAAGCCTTGTGAAGGTGGTGCAACATAGAAAAGAGGTGCAGCGTAGACAAAACGAGGTGGTGGCATGGAACCTTGCTCGTCGGTCTCAGATTCAGAGTTGCCTCGCTCGAAGCTTCTCTGTTCCTGGATCAGTTCACCTGCCTGGTAAGGCATGGAATCTCGTGCTTTGTTCTCAAATTCAGAGTTGCCTCGCTCAAAGCTTTTCTGTTCCTGGAGCAGTTCACCTGCCTGGTACTGTGGAAGAAAAGAACCAGGCCGGATCAGATTGCTAAGGCCAAGTGGTCGAAGGGCAGGTCCACTGGCAGCAAACTGCTGAGTGCTAGGTTCTGTGGATGCTCCAGCAGAAAAGGGACTGGGAGCATCCACAGGACCTAGCACTCAGCAGTTTGCTGCCAGTGGACCTGCCCTTCGACCACTTGGCCTTAACTTTGTGATCCAGCCTGACCATCTTCTTCCACAGTACCAGGCAGGGGAACTTTTCCAGGAACAGAAAAGATTCGAGCAAGGCAACTCTGAATCCGAGAGCAAAGCGCAAGGTTCCATGCCACCACCTCGTTTTGTCTATGCTGCACAGCCTTCACAAGGCTTTAATGGAGGACCTGTGCCATCAGGCCTGGTCCCCTATCCTTACCCTTCCTATGACTACATGTTTCTGAATGGCCAGTATCCTCCAGGCACTTATACTTACACCAGCAACAACTTTGAGCAGGGGAGGGACAGCTGGGAGGATGCTCTCTACACAAGGGATAATTATCCCAGCACTCAGCAGGCCAAGAACATCCCTTATAGACATCGCACCGTCAGGCAGGCGAGTATTGGGAGTGCTAGTCAGAGTGGTGCAGCGACTGGACAACAGCAGCCCTACAGTGGAGTTGGTGTACAAGGTTCTTACTCGCAGCCGGGCCGCCGCCGGCGAGCGCCAAGAGCATTCATGCAAAAGgttggCTAAAGGGAGACTCTAAAGTCTTGTCAATAAAGAATATAACTTTTGTTTGCCCTGGTTTTCAATGTTTACTCCCAAGATTTATTACTTGTGTAGCCAAAGGTCTAACTGGGTGCAGGGTTTGACAGTCCATGTTAATAGTCCAGAATGTGAGCCATTTACAATCTGGCCATAGAACTACCACAAATCACCAATAACTTCCTATATTATGCTATGATCCAAATAACTGAGTCTGCTGCTGAACCCAGTTCTGTCATGACCCCTTGTAGTAGTTTATTTCGAACATGTAAAAAATCTATActacacagacatgcatacttCAAATGACTGCTCATGTACTTCTCAGCATAATCTTCCTAAATAAGTAATTCAAATTAGAAATTCCCATGTTGATAAAGGAGTGGGATGAAGTTCACAAACTTTTCAGGTCCTACCCACTTATTTTTATCCTTAAATACAAAATGTGATGCTTCTCATACATTTTTACATACACTGTATATCTACCTACTGTTCACATAAACCCATGCATTCACACTTCACTTTTTATTCTCCATCTATCTTTTCTGTCTATCTCTAGCAAATCAACTAACACCTCCAATCTCTAATATGTAGAGCAAGGAACCTGTATACAGTACTATAACTTCGAGTCCTTCTCGTATctaatatattcagtttaaatGGTCTTAAAATTACTCGTACATGATTTCATCTCTTCACTGCAGCTGTTCCATACATTAAATCTTTTGGTTGTGATGCAGTGATATTTACAATTAggtttctttttaaatacaaatgtaCCTCTTAAGTGATTGCTCTCATTTGAAACAACCCTTGAATACTGTTTGATAACAGTTTAGCTATTTTGTACATAATTTGTGCAGTTTTGAAGTCAATCTCTGAATTTTAGggcttttaatttaataaacagTGGAGTAGTTGGTGCTCTATAAGTGGTTATAAGTTATTTACAATTCTTAAGGCTCTTTTGAAGGATGAATATAGGTTCAGTGTGGGTTTTGTGTTTCCCCATACTTCCAAACTAATGTATGGCAGTATGAAGAAACAATACAACGTAATGTGTACAGTGATTGTTGATTTAATAGGTAATTTGTTTTATACAATATAGCAATTTATTTTGATATTTCGGCCTTGATATAGTGTATATGTGGCTTCCAACATAATTTCTCATCAATTATTACTCCC
>XM_039782688.1
ACTTATAAACCTTTCACAGGATTACAGTGGTACCTGAGCGGTTCATTCAACATGATGGCTGTGTGGTGTACTGCTGGGGCTTTGCTCCTTGTTCTGCTGACTGGTTTGAGTGACAGCTACCCTATGCAGCAAGCTCAGTCCAGTTTTCAGAATGCACCTCCAGGATATGCTCAAGGCTCTTCTGCAGGCCCTGCCTCTAAACAAGGCATTTCCTGGGCTGTTGCACCTCCCAGTCCATTTTCTGCTGGAGCATCCACAGGACCTAGCACTCAGCAGTTTGCTGCCAGTGGACCTGCCCTTCGACCACTTGGCCTTAACTTTGTGATCCAGCCTGACCATCTTCTTCCACAGTACCAGGCAGGGGAACTTTTCCAGGAACAGAAAAGATTCGAGCAAGGCAACTCTGAATCCGAGAGCAAAGCGCAAGGTTCCATGCCACCACCTCGTTTTGTCTATGCTGCACAGCCTTCACAAGGCTTTAATGGAGGACCTGTGCCATCAGGCCTGGTCCCCTATCCTTACCCTTCCTATGACTACATGTTTCTGAATGGCCAGTATCCTCCAGGCACTTATACTTACACCAGCAACAACTTTGAGCAGGGGAGGGACAGCTGGGAGGATGCTCTCTACACAAGGGATAATTATCCCAGCACTCAGCAGGCCAAGAACATCCCTTATAGACATCGCACCGTCAGGCAGGCGAGTATTGGGAGTGCTAGTCAGAGTGGTGCAGCGACTGGACAACAGCAGCCCTACAGTGGAGTTGGTGTACAAGGTTCTTACTCGCAGCCGGGCCGCCGCCGGCGAGCGCCAAGAGCATTCATGCAAAAGgttggCTAAAGGGAGACTCTAAAGTCTTGTCAATAAAGAATATAACTTTTGTTT
>XM_039782689.1
TATAAACCTTTCACAGGATTACAGTGGTACCTGAGCGGTTCATTCAACATGATGGCTGTGTGGTGTACTGCTGGGGCTTTGCTCCTTGTTCTGCTGACTGGTTTGAGTGACAGCTACCCTATGCAGCAAGGCATTTCCTGGGCTGTTGCACCTCCCAGTCCATTTTCTGCTGGAGCATCCACAGGACCTAGCACTCAGCAGTTTGCTGCCAGTGGACCTGCCCTTCGACCACTTGGCCTTAACTTTGTGATCCAGCCTGACCATCTTCTTCCACAGTACCAGGCAGGGGAACTTTTCCAGGAACAGAAAAGATTCGAGCAAGGCAACTCTGAATCCGAGAGCAAAGCGCAAGGTTCCATGCCACCACCTCGTTTTGTCTATGCTGCACAGCCTTCACAAGGCTTTAATGGAGGACCTGTGCCATCAGGCCTGGTCCCCTATCCTTACCCTTCCTATGACTACATGTTTCTGAATGGCCAGTATCCTCCAGGCACTTATACTTACACCAGCAACAACTTTGAGCAGGGGAGGGACAGCTGGGAGGATGCTCTCTACACAAGGGATAATTATCCCAGCACTCAGCAGGCCAAGAACATCCCTTATAGACATCGCACCGTCAGGCAGGCGAGTATTGGGAGTGCTAGTCAGAGTGGTGCAGCGACTGGACAACAGCAGCCCTACAGTGGAGTTGGTGTACAAGGTTCTTACTCGCAGCCGGGCCGCCGCCGGCGAGCGCCAAGAGCATTCATGCAAAAGgttggCTAAAGGGAGACTCTAAAGTCTTGTCAATAAAGAATATAACTTTTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249125 True 2524 TUCP 0.44 3 12960498 13007868
XM_039782688.1 False 885 mRNA 0.51 5 12961650 12963019
XM_039782689.1 False 810 mRNA 0.51 4 12961650 12963016

Neighbor

gene id symbol gene type direction distance location
LOC120547206 NA coding downstream 2687 12956473 ~ 12957811 (-)
LOC120547205 NA coding downstream 12176 12946958 ~ 12948322 (-)
LOC120546273 NA coding downstream 212760 12746386 ~ 12747738 (-)
ccnk ccnk coding downstream 257314 12695937 ~ 12703184 (-)
trnat-ugu_2 NA coding downstream 377257 12583169 ~ 12583241 (-)
si:dkey-261l7.2 LOC103457838,LOC106927103,LOC106964160,LOC103148020 coding upstream 133587 13141455 ~ 13145095 (-)
LOC120546943 phip coding upstream 140783 13148651 ~ 13202337 (-)
mut mut coding upstream 429202 13437070 ~ 13458215 (-)
ubxn2a ubxn2a coding upstream 487070 13494938 ~ 13500594 (-)
LOC120546185 klhl29,LOC102787074 coding upstream 571443 13579311 ~ 13802160 (-)
G183952 NA non-coding downstream 37691 12841032 ~ 12922807 (-)
LOC120546274 NA non-coding downstream 74723 12884370 ~ 12885775 (-)
G183910 NA non-coding downstream 329706 12588138 ~ 12630792 (-)
G183908 NA non-coding downstream 333792 12592618 ~ 12626706 (-)
G183898 NA non-coding downstream 400723 12540583 ~ 12559775 (-)
G183981 NA non-coding upstream 26384 13034252 ~ 13034497 (-)
G184026 NA non-coding upstream 241723 13249591 ~ 13250436 (-)
G184049 NA non-coding upstream 310620 13318488 ~ 13318930 (-)
LOC120546199 NA non-coding upstream 331315 13339183 ~ 13398575 (-)
G184162 NA non-coding upstream 834404 13842272 ~ 13842477 (-)
ost4 NA other downstream 51751 12907302 ~ 12908747 (-)
G183650 NA other downstream 1585883 11374108 ~ 11374615 (-)
LOC120546776 NA other downstream 2349873 10455244 ~ 10610625 (-)
G183528 NA other downstream 2439088 10520717 ~ 10521410 (-)
LOC120546281 LOC107372644,LOC107099224,LOC106591698 other downstream 2859437 10099478 ~ 10101061 (-)
hmgn3 hmgn3,LOC104958971 other upstream 137596 13145464 ~ 13215900 (-)
runx2b runx2,LOC102312376 other upstream 248017 13255885 ~ 13303784 (-)
fkbp1b fkbp1b other upstream 450734 13458602 ~ 13468065 (-)
mfsd2b mfsd2b other upstream 465815 13473683 ~ 13491143 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other upstream 1464333 14472201 ~ 14498370 (-)

Expression


Co-expression Network