fkbp1b (fkbp1b)


Basic Information

Item Value
gene id fkbp1b
gene name fkbp1b
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 13458602 ~ 13468065 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU249306
AGAAAATATCTTGGCTGTCCCACGGTTGGCTGCAGCTACGGGTCCGTAGTGGTCGGtgaatacatggttttcacCGATATAGCCCGACTTGTAGCCGCAAAACGGGTAACGTTGGCTGTCAAAACGGCTTTGTAGTTCTCTATGTTTCAGAGCTGATTTTTTAAGTAGTACAACCATGGGCGTGGAAGTCGAGACAATATCTCCCGGTGACGGAAGAACATTTCCAAAGAAAGGCCAGACATGTGTTGTTCATTACATAGGTATGCTGCAGAATGGGAAGAAGTTTGACTCTTCCCGAGACAGGAACAAGCCCTTTAAGTTCAAGATTGGACGGAGTGAGGTCATTAGGGGCTGGGAGGAAGGAGTAGCACAGATGAGCCTGGGCCAGAGGGCAAAAATCACCTGCACACCAGATATGGCTTACGGCGTGACAGGCCACCCTGGGGTCATCCCCCCGAACGCCACACTTATATTCGATGTGGAACTGCTCAAGCTGGAGTGATGCCTGAGGTTAAATACGAAGGGTGAAGCTTAATGAGGCTGAGTTTGTCACGACCTGTTTCTACAGGGAGACCATACTTGGCTGCTGCCTCCCACCATCCACCTACTCTTCTTTGATTTCTACAGTCTTCTTTAGTTCAATATTTAAACGTATCTACCGCTGCTTTGTTGCCATCTTGTCATAATACATCCTTGAGAAAGATTTCACATCGTGCAAGACTTTTTCACTCACACCACAGTTTGGCTTGTTTGTTAGTCAAAGATGCTATTTTGTTTGACTGCATTTAAAGTTGTACATTTTGTTGAACCGTGAGGAAATCCTTCATCATGATCACGAGCCACACTACATTGCAATCAAAACATATACTGCCTTACAGTTTCAACAACAGAGgatgtgtatttatgttgaaAGTACATAATTTCTGCTCTGTATCTTAACTGGGCATTATATACCACTGTCTGCATTGCCACTTTGATAAAGGTTTGTCCTGCTGAATGCTCTGAATGATGTTGCTATGTGTAGTATATTTTATATCCCTCATAAACATGTACTGCAAGGCTACCCaatcaaatctaacccaatccAATACTGTACAGAACTCTATGAGAGCCATTACTACTATGACAGTTTATCGACCAACTCTTGAATAAAAATGGCATG
>XM_039781819.1
TGCAGCTACGGGTCCGTAGTGGTCGGtgaatacatggttttcacCGATATAGCCCGACTTGTAGCCGCAAAACGGGTAACGTTGGCTGTCAAAACGGCTTTGTAGTTCTCTATGTTTCAGAGCTGATTTTTTAAGTAGTACAACCATGGGCGTGGAAGTCGAGACAATATCTCCCGGTGACGGAAGAACATTTCCAAAGAAAGGCCAGACATGTGTTGTTCATTACATAGGTATGCTGCAGAATGGGAAGAAGTTTGACTCTTCCCGAGACAGGAACAAGCCCTTTAAGTTCAAGATTGGACGGAGTGAGGTCATTAGGGGCTGGGAGGAAGGAGTAGCACAGATGAGCCTGGGCCAGAGGGCAAAAATCACCTGCACACCAGATATGGCTTACGGCGTGACAGGCCACCCTGGGGTCATCCCCCCGAACGCCACACTTATATTCGATGTGGAACTGCTCAAGCTGGAGTGATGCCTGAGGTTAAATACGAAGGGTGAAGCTTAATGAGGCTGAGTTTGTCACGACCTGTTTCTACAGGGAGACCATACTTGGCTGCTGCCTCCCACCATCCACCTACTCTTCTTTGATTTCTACAGTCTTCTTTAGTTCAATATTTAAACGTATCTACCGCTGCTTTGTTGCCATCTTGTCATAATACATCCTTGAGAAAGATTTCACATCGTGCAAGACTTTTTCACTCACACCACAGTTTGGCTTGTTTGTTAGTCAAAGATGCTATTTTGTTTGACTGCATTTAAAGTTGTACATTTTGTTGAACCGTGAGGAAATCCTTCATCATGATCACGAGCCACACTACATTGCAATCAAAACATATACTGCCTTACAGTTTCAACAACAGAGgatgtgtatttatgttgaaAGTACATAATTTCTGCTCTGTATCTTAACTGGGCATTATATACCACTGTCTGCATTGCCACTTTGATAAAGGTTTGTCCTGCTGAATGCTCTGAATGATGTTGCTATGTGTAGTATATTTTATATCCCTCATAAACATGTACTGCAAGGCTACCCaatcaaatctaacccaatccAATACTGTACAGAACTCTATGAGAGCCATTACTACTATGACAGTTTATCGACCAACTCTTGAATAAAAATGGCATGTATTGTGTTGAGAa

Function

symbol description
fkbp1b Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in chaperone-mediated protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Is expressed in basal plate midbrain region; brain; cranial ganglion; and myotome. Human ortholog(s) of this gene implicated in Graves' disease. Orthologous to several human genes including FKBP1B (FKBP prolyl isomerase 1B).

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP1B isoform X1

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0033017 sarcoplasmic reticulum membrane cellular_component
GO:0005528 FK506 binding molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249306 True 1162 TUCP 0.44 4 13458616 13468065
XM_039781819.1 False 1146 mRNA 0.43 4 13458602 13468035

Neighbor

gene id symbol gene type direction distance location
mut mut coding downstream 387 13437070 ~ 13458215 (-)
LOC120546943 phip coding downstream 256265 13148651 ~ 13202337 (-)
si:dkey-261l7.2 LOC103457838,LOC106927103,LOC106964160,LOC103148020 coding downstream 313507 13141455 ~ 13145095 (-)
LOC120546166 LOC103355735,LOC104963358,LOC100702431,LOC102289960,LOC108231778 coding downstream 443375 12998089 ~ 13015227 (-)
LOC120547210 NA coding downstream 466681 12990575 ~ 12991921 (-)
ubxn2a ubxn2a coding upstream 26873 13494938 ~ 13500594 (-)
LOC120546185 klhl29,LOC102787074 coding upstream 111246 13579311 ~ 13802160 (-)
trib2 trib2 coding upstream 351607 13819672 ~ 13827042 (-)
napbb napb,LOC103381049,LOC102194491,LOC102306363,LOC106518545,LOC102225024,LOC103457862,LOC107097573,LOC107378120 coding upstream 409167 13877232 ~ 13887170 (-)
gpcpd1 gpcpd1 coding upstream 421275 13889340 ~ 13910132 (-)
LOC120546199 NA non-coding downstream 60027 13339183 ~ 13398575 (-)
G184049 NA non-coding downstream 139672 13318488 ~ 13318930 (-)
G184026 NA non-coding downstream 208166 13249591 ~ 13250436 (-)
G183981 NA non-coding downstream 424105 13034252 ~ 13034497 (-)
G183952 NA non-coding downstream 535795 12841032 ~ 12922807 (-)
G184162 NA non-coding upstream 374207 13842272 ~ 13842477 (-)
G184204 plcb1 non-coding upstream 650957 14119022 ~ 14141806 (-)
G184208 NA non-coding upstream 719363 14187428 ~ 14231705 (-)
G184217 plcb4 non-coding upstream 754910 14222975 ~ 14225219 (-)
LOC120546499 NA non-coding upstream 770361 14238426 ~ 14243275 (-)
runx2b runx2,LOC102312376 other downstream 154818 13255885 ~ 13303784 (-)
hmgn3 hmgn3,LOC104958971 other downstream 242702 13145464 ~ 13215900 (-)
LOC120547209 NA other downstream 450734 12960498 ~ 13007868 (-)
ost4 NA other downstream 549855 12907302 ~ 12908747 (-)
G183650 NA other downstream 2083987 11374108 ~ 11374615 (-)
mfsd2b mfsd2b other upstream 5618 13473683 ~ 13491143 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other upstream 1004136 14472201 ~ 14498370 (-)
naa30 naa30,LOC102795089,LOC104960600 other upstream 1103315 14571380 ~ 14612946 (-)
LOC120547045 LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 other upstream 1189112 14657177 ~ 14667601 (-)
rps29 NA other upstream 1642175 15110240 ~ 15111479 (-)

Expression


Co-expression Network