mfsd2b (mfsd2b)


Basic Information

Item Value
gene id mfsd2b
gene name mfsd2b
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 13473683 ~ 13491143 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU249319
AACAACCGAGAAGTGTGGAGACGCGCAGACCATCTCCATCGTCCGCAGTCAGTCTCCTTCTCATCCTGCCtgcctgactgtctgtctggctgACAGGGAGATCACTGCATTGACCAAAAACTCACTAACTACCGAACTACAACCACTGACAGCACCGGCTGCTTTTCCACCAGCACGGGAGCAACAACAGCATGTGAATGGCGGCAGAAAGCGGCAGAGTTGTCacagaggagcaggaggagctcCCAGCCTCTGGAGCCGTCACTCAcgcgcaccacacacacacccggagTCAGAGCCACATCCAGTTTCAGCCTCTGACACACACCACCCAGTGGCAGGCTCCTCGTACTCTCGCTCACACGAGGAGTCACAGTCACACTCAGTTCAacactccctcacacacacagtcgcagAAGTACGGCTGTCGcctcacacacagtctctcagcCATGGCCAAGGGAGAGAAGGGAGCGCAGGGCTCTGCAGGGAAGCTCATCAAGCCAACTGAACCGCTGTTCCCCAAAACTCCTCAGCAGACTGAGTTGGGCCAGAAGTTGACATTATGCAGTAAGCTGTGTTTCGCCATCGGCGGCGCGCCCAAGGAGGTGGCTGCAAGCGCCACTGCCTTCTTCCTGCAAATCTACCTGCTTGATGTCGCTCAGATCAACGCCTTCCAGGCCTCCATGGTGCTGTTCATCGGTAAAGCCTGGGGCGCAGTGAGCGACCCCGTAGTCGGATTCCTCATTACAAAGAGCAGATGGACCAAGATTGGCAGACTCATGCCCTGGATGGTGGGTTGCACTCCGTTTCTGGTGGTCTCCTACTTCTACCTCTGGTTTGTTCCTCCTTTCATCAGCGGAAGGTTCTTCTGGTACCTAGGCTTTTACTGCCTCTACCAAAC
>XM_039781820.1
CAGGGCGCAGCTGAAAACAACCGAGAAGTGTGGAGACGCGCAGACCATCTCCATCGTCCGCAGTCAGTCTCCTTCTCATCCTGCCtgcctgactgtctgtctggctgACAGGGAGATCACTGCATTGACCAAAAACTCACTAACTACCGAACTACAACCACTGACAGCACCGGCTGCTTTTCCACCAGCACGGGAGCAACAACAGCATGTGAATGGCGGCAGAAAGCGGCAGAGTTGTCacagaggagcaggaggagctcCCAGCCTCTGGAGCCGTCACTCAcgcgcaccacacacacacccggagTCAGAGCCACATCCAGTTTCAGCCTCTGACACACACCACCCAGTGGCAGGCTCCTCGTACTCTCGCTCACACGAGGAGTCACAGTCACACTCAGTTCAacactccctcacacacacagtcgcagAAGTACGGCTGTCGcctcacacacagtctctcagcCATGGCCAAGGGAGAGAAGGGAGCGCAGGGCTCTGCAGGGAAGCTCATCAAGCCAACTGAACCGCTGTTCCCCAAAACTCCTCAGCAGACTGAGTTGGGCCAGAAGTTGACATTATGCAGTAAGCTGTGTTTCGCCATCGGCGGCGCGCCCAAGGAGGTGGCTGCAAGCGCCACTGCCTTCTTCCTGCAAATCTACCTGCTTGATGTCGCTCAGATCAACGCCTTCCAGGCCTCCATGGTGCTGTTCATCGGTAAAGCCTGGGGCGCAGTGAGCGACCCCGTAGTCGGATTCCTCATTACAAAGAGCAGATGGACCAAGATTGGCAGACTCATGCCCTGGATGGTGGGTTGCACTCCGTTTCTGGTGGTCTCCTACTTCTACCTCTGGTTTGTTCCTCCTTTCATCAGCGGAAGGTTCTTCTGGTACCTAGGCTTTTACTGCCTCTACCAAACATATCAGAACTGCTTCCACGTGCCTTATTCTGCTCTCACCATGTTCCTGAGCACAGACCAGAAGGAAAGAGACTCAGCCACTGCTTACCGAATGACAATGGAAGTGCTGGGGACACTTGTGGGCGCTGCCATCCAGGGCCAGATTGTGGCCAGCGCTCACACTCTGAAGCACTGCCCGCCTCACAACATGTCTGCCGGTTACCTTGGCAACAGCAGCGGGGCAGAGATCGTCACGAGACTGGTGCGCTCCCAGGACTACCTGTCACACTCAAAGAAGGTGTACATGATAGCTGCTGGTGTTGTAGGAGGAGTGTTCCTCGTCTGCACATTGGTGATGTTCCTGGGAGTCAAAGAGAAAGATgATCCGTACACCCCAAGGACAGAGAAGCAGATCCCATTCCATCAGGGCTTCATCCTGGTGATGAGACACGGGCCATACCTCACTCTAACGGCTGCATTCCTCTTCATCACTGTCGCCATTCAGCTGGTACAGAGCAACTTTGTCCTCTTCTGCACTTACGCCGCCGACCTGAGGGATCACTTCCAGAATATTGTGCTGACCATCCTGGTTTCTGCAGTGATAAGCATCCCGCTGTGGCAATGGTTTCTGCAGAGGTTTGGGAAGAAGACGGCAGCTTTTTGCGGTATCACATGGATCATGCCCTTCACCATGATGCTGGTCTTCATCCCCAATGTTGTGGTGGCCTACGTTGTGGCTGTCTCCTCTGGACTCAGTGTGGCTGCCTCGCTCCTGCTGCCATGGTCTATGCTGCCAGATGTGGTGGATGACTTCAGACTGGCTAACCCCTACTGTAAAGGCCATGAAGCCATCTTCTACTCCTTCTACGTGTTCTTCACTAAGTTTGCTGCAGGCATCTCCCTGGGGGTGTCCACCCTCTGCCTGGAatttgCAGGGTATGACACCGGCGCCTGCAAGCAGCCTGCTCCTGTAGTGTACACCCTGAAGCTGCTGATTGGTGCTGCCCCAGTGGCCTTTATTGTTACAGGGTTAATGATCCTACTGCTCTATCCTATCACCGAAGACGTACGGCTCAGGAACAGATTCTGCCTGGATGAGCTACGGAAACAAAGCATCAGCTCCAAAACAATGGAAGATTTGAGTAATGTGTGACCTGGATCTGGGATGAAGTGAATTCACAAAGCCACGTATTCCAGCGACGCCGCTGGAAAGTTGTTCCATTAGTGTATATTACACTgatatttaaattgttttaatgtaaacatttttgtttcattttcacatGTACTGTGCAGTCATCTTGGATATATAAGATTACCTAATTTATATAAATGAATGTATATGATTATTTGCTGTGTTTAGCTCTACAatgctgttatttatttatgatacatgATTATTGAGGGCTGATgatatgaaatgaataaatgttgTAGAGGTTGGTTGGTAGACCGAATAAATGTGTGTCTCTTTGCTGAAGTAAAATAAGTAACACACAAAGGAGTGTAAACTAGTTATGTAGATTTAATATTCAAAATGCTaccaaaagatgttttttttttttttacaagataCACTTGTAGAGCTCTGAATGACACTGTGAACAGCAGTGATACTCAACCTATGGCCCGTGACGGGTAGCCCCCAGCCATTTTCTAATtcgcaataaaaataaatgaattttcactggaatctttttttttttttgtactttgaaTGTGAATAATGTGCCAGACAGAGACAGGGTGGGTTTTTGGATGGAGTGCAAAgcggatttttttaaatgttggagCTTAGCCTTATCTCCCGCTCCACCCTGCTCACATCCTTCGTTCGAAGCCTGCCCGAGTCCGTCTCTCTCTTACTGCAGCacagtacatgcagatgaatggcgctGGCCAGTGCTTGTCATCTGGCGGACCTTTTGCCCCAGGATCCCCCGGACCCCGACAGGTCCGGGCTAGTCCCGGATGTCCTCAAATCCTAGAAGCGCCCCTGCGTACGCCTGACCTGTGCGAGCTGCTGCGACTGGATTTGCCACTTGAAAGGTTGAAAACAGGCCATTCAATAAAAATAGACAGATGAATTTGCCTTTATTTTCCCACTTCATATACCAATCCTAAACCACTGTGTTTAATTGCTATATGCAAGGTTGCTAATATCAGGTGCCATCACAAGTTGTATATTAACTGGCCCTGTGAAGCAAGTTGAGTATCACTGCTGTATGTAGCAATGACAGGAAAGTTTCTGTTGAGTCTTGCCCCCTCTAGTGGTCAGTTGTGTTACTGAGCTTGGTAACATTACAAATATAGGAGAAGTTCAACATTTTATATGATATATGATTTTTATATAACCCAGAGCATTGTATAACAAAGGTTAAATTACACTTGAGTGTtacacattcattttagtggGACTTTTCAGCATGAAAGTGCCAAAACAGAGATTCTATGGGTAAAATTTTAATTTCATACTCCCCCCCTTTGAGTGTGGGGAtttctgcagtgctctagtaATAACAAATACAGATCCAAATAAAACACTGACATCATA

Function

symbol description
mfsd2b Predicted to enable sphingolipid transporter activity. Predicted to be involved in organic substance transport. Predicted to act upstream of or within carbohydrate transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human MFSD2B (major facilitator superfamily domain containing 2B).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family

RNA

RNA id representative length rna type GC content exon number start site end site
TU249319 False 904 TUCP 0.56 5 13481924 13491128
XM_039781820.1 True 3452 mRNA 0.48 15 13473683 13491143

Neighbor

gene id symbol gene type direction distance location
mut mut coding downstream 15468 13437070 ~ 13458215 (-)
LOC120546943 phip coding downstream 271346 13148651 ~ 13202337 (-)
si:dkey-261l7.2 LOC103457838,LOC106927103,LOC106964160,LOC103148020 coding downstream 328588 13141455 ~ 13145095 (-)
LOC120546166 LOC103355735,LOC104963358,LOC100702431,LOC102289960,LOC108231778 coding downstream 458456 12998089 ~ 13015227 (-)
LOC120547210 NA coding downstream 481762 12990575 ~ 12991921 (-)
ubxn2a ubxn2a coding upstream 3795 13494938 ~ 13500594 (-)
LOC120546185 klhl29,LOC102787074 coding upstream 88168 13579311 ~ 13802160 (-)
trib2 trib2 coding upstream 328529 13819672 ~ 13827042 (-)
napbb napb,LOC103381049,LOC102194491,LOC102306363,LOC106518545,LOC102225024,LOC103457862,LOC107097573,LOC107378120 coding upstream 386089 13877232 ~ 13887170 (-)
gpcpd1 gpcpd1 coding upstream 398197 13889340 ~ 13910132 (-)
LOC120546199 NA non-coding downstream 75108 13339183 ~ 13398575 (-)
G184049 NA non-coding downstream 154753 13318488 ~ 13318930 (-)
G184026 NA non-coding downstream 223247 13249591 ~ 13250436 (-)
G183981 NA non-coding downstream 439186 13034252 ~ 13034497 (-)
LOC120546274 NA non-coding downstream 587908 12884370 ~ 12885775 (-)
G184162 NA non-coding upstream 351129 13842272 ~ 13842477 (-)
G184204 plcb1 non-coding upstream 627879 14119022 ~ 14141806 (-)
G184208 NA non-coding upstream 696285 14187428 ~ 14231705 (-)
G184217 plcb4 non-coding upstream 731832 14222975 ~ 14225219 (-)
LOC120546499 NA non-coding upstream 747283 14238426 ~ 14243275 (-)
fkbp1b fkbp1b other downstream 5618 13458602 ~ 13468065 (-)
runx2b runx2,LOC102312376 other downstream 169899 13255885 ~ 13303784 (-)
hmgn3 hmgn3,LOC104958971 other downstream 257783 13145464 ~ 13215900 (-)
LOC120547209 NA other downstream 465815 12960498 ~ 13007868 (-)
ost4 NA other downstream 564936 12907302 ~ 12908747 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other upstream 981058 14472201 ~ 14498370 (-)
naa30 naa30,LOC102795089,LOC104960600 other upstream 1080237 14571380 ~ 14612946 (-)
LOC120547045 LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 other upstream 1166034 14657177 ~ 14667601 (-)
rps29 NA other upstream 1619097 15110240 ~ 15111479 (-)
si:dkey-177p2.18 LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 other upstream 2297683 15788826 ~ 15795638 (-)

Expression


Co-expression Network