G184204 (plcb1)


Basic Information

Item Value
gene id G184204
gene name plcb1
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14119022 ~ 14141806 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU249445
CAAATTCCCTttacactattttttttttttaaatcaacttcATGTTTTATCCTTTATGTCatacatacatttacatttccaGAGTGCATACGCGTAAGTTGATGAgaaggggaggggtgggggggggggactgttAAATAAAGTGATTCAAGACTAAAAAGAAGGATGTCTCGCATTTCTTATGAGACACATGTCAAATACTGCTCATCACAAGCATTACTCAGTAGTGGTACTGTACTTAAAAGTGCACACAGCCTATTCAATATCAGACAGCttcatataatataatataatggcaATTTAAACAATGATGCATTTCACACATTCAACATCAAACAAGGCAAACCAAGGCACAGGACTCTCACATCAATATctttttaaaaagtagtttGTACTTACATTGCAGGTAATCCTTCACATTCAacgttttttgtcgtttttttttttcagctgaaaTATGATTTGATATCAAATGGCCCGTGAGTTAAATGGCACTGGACAGCTAGGAAGTCCAAAACACTTTCTCGTGGTTTCTAAATGGGTTAAAAGTTAAAGAGGAAATAGTCCAGTTGTTCATTAGATCATGTCAACGCTGGTGTTTCACAGATATAAACTAAGCGTTTGGTGTCTGTTTGAACATAACTGAACTATTCCCCCACTTCAAACAACAGCTACCAATTCTGGGTGAACATTGGGTGACATACTTCCTGTGGTCCTGAGCATCTGCTCTGTGTACTGGGGAACTACACACACATTCCACTGTAGGTACACAATGAACCACTTAAGAGGAAGGCCACTGCTCTTTAAAACTACAGCAGGatcctctttttttgtttgattaTCCTGGTTTGACTGTTTTAGTTCAACGGAACAAAGGTAACGAATACAATGGGCAACCTGGTAACTTGAGCCAGCTACTGTTGGATCTAAGAAAAGGGTGTGTTGTTATGTGGGTATGTCTTATTTTAGTCCTGTCCAGCTAACGCCACAGTGATGTATCAAGCCACACTGGGTCCATACTGTTTTGCAGGTTTTAGTTTAAATGTTTCCAAGAAAATAGAtttacatttaataaacatCTCTGCTACAGAGCTACTGTAACATTTACAGTTGTTCAAATACATGCAGATACTGTACAACACACCTTCTCTTCACTTCCTCTGTGGGCTGAATTGcccacaaacaacacaaactaGCCAAGAAAAAAGAATGACACTGCATACTATTACCATGCCAAATCTCATACAAACCAAATAATGGTTAAAAAGGGCgggttttaaaagaaaatagcaGCAACACATAGGCTTAGTTCTGTGAGAACAAAATCGAGAACCAGCAAGCCACCAGTGCCTGTGGGTTAAACTAAAAGAGTTACATAGTTACATATGGAGCCTTCAGTGCAAAAAAGTAAAGGTGAATTTAAATCTTATAAAGATGTAGGCTTTAAAGGCTGAATATGCAGTGGTTTCTTTACAGTACAAGTTGACTCCACTTAAAGGACAATGTCCGCTGTAATTGAAATCAAAACCTTGGCACCACACACCTCACGAATCACCACTGCTGTCAATATcatgataataaaaaagaataaaaataaactactcTCTCTGTGCAATAGTTCAAGTAAGTTATTTCCTGCAAATAGTTAGTGCTTTGTAACACATCCTGTGGCCGTACCGAAAGAGACGACAACATAAAGGTAACatataaatacacaaaaaaagttACTATTTACATTAAACAGTTTTCTGGACAAGACTGCACTCTACGCAGAGAGGACCTCTACTTACCAATTCAGGCTCAGATTTGATCTAATCCTCCCATTGGTTACAATAAGGACCAAAGTTGGAGCAGTGTCATCCTAGATCTGCGGTCACAAACACATCCACCAATCAGTGTCCCAGTGTGAAGCAAAGCGACGAGGTTAAATCTCTAAAGGGGCGTGTCGTAGACCCGTTCCGATGAGCCCTCCTCCATGTCGTCCTCCGACTGCAGCGCCTTGTGGTTTAGCCTCTCTGTTGTTGAGGAGGCAACAAGGTTTCCGTGGACACCTTCGTCGCTAAGCTTGGCCTTGCTGCTGTCCTGAACAAACTCTTGGATCTCCACGGGTAGCCGGCGAAATTTGTCCTGGTACTCCTGGTCCAGATCGCTCTGTAGCTTTGGCCTTTCATCCAAGATTTGTTGGCGGATATCCTTCTGCTTCTCCAGCAGTCTCTCCTGTCTTTTACTCTGTGCGTCTtccaaCCGTTTAATGTACTGCACCACCTCGTTGACAAACGATCTGTTGATCTCCAGCTTCTCTTCCTCTGTCACATTCTTGTCTTTAGATTTGGCTTCACTGATCTTCTCTTGCCTTTTCTTGTCCATTTTCTTCTTGATATCCTTCTTTTCTTTCTCACAGATGTCTCTGAGTTTTTTGATCTGAGCGCTCTGGCACTCCTCTGCTATAGTGGTAAGCTTCTCAACCAgCTGCTTGATGTGTTCTCGTTTCTGGTACTTTTCGCTGTAGTACTGCTCCTGGCGAAGTGtgaggagctgctgctgctgctcctccttcAGCTCTGCAAGCCTCTGGCTGCACTCCTGATCCAGCTCACACAGCTCCTGGTCCAGGCTTGACAGAGAGTGTTCGGACcgactggacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaat

Function

symbol description
plcb1 Enables several functions, including calmodulin binding activity; phosphatidylinositol phospholipase C activity; and phosphatidylinositol-4,5-bisphosphate binding activity. Involved in cytokine-mediated signaling pathway; phosphatidylinositol metabolic process; and positive regulation of JNK cascade. Located in cytoplasm and nuclear speck. Implicated in developmental and epileptic encephalopathy 12 and myelodysplastic syndrome. Biomarker of Alzheimer's disease; acute myeloid leukemia; and myelodysplastic syndrome.

NR:

description
PREDICTED: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249445 True 2729 lncRNA 0.42 6 14119022 14141806

Neighbor

gene id symbol gene type direction distance location
bmp2b bmp2 coding downstream 131621 13981265 ~ 13987401 (-)
fermt1 fermt1 coding downstream 161884 13946704 ~ 13957138 (-)
trmt6 trmt6 coding downstream 174189 13938613 ~ 13944833 (-)
LOC120546266 slc23a2,LOC100699458,LOC101468039,LOC108231760,LOC106518547,LOC102297661 coding downstream 200898 13911571 ~ 13918124 (-)
gpcpd1 gpcpd1 coding downstream 208890 13889340 ~ 13910132 (-)
pak5 pak5,LOC102790572 coding upstream 102635 14244441 ~ 14322141 (-)
LOC120547016 LOC103375044,LOC104947369,LOC101079388,LOC102209315 coding upstream 193833 14335639 ~ 14359390 (-)
magl NA coding upstream 218707 14360513 ~ 14378555 (-)
LOC120546406 NA coding upstream 238208 14380014 ~ 14381177 (-)
LOC120546407 NA coding upstream 245714 14387520 ~ 14388443 (-)
G184162 NA non-coding downstream 276545 13842272 ~ 13842477 (-)
LOC120546199 NA non-coding downstream 720447 13339183 ~ 13398575 (-)
G184049 NA non-coding downstream 800092 13318488 ~ 13318930 (-)
G184026 NA non-coding downstream 868586 13249591 ~ 13250436 (-)
G183981 NA non-coding downstream 1084525 13034252 ~ 13034497 (-)
G184208 NA non-coding upstream 45622 14187428 ~ 14231705 (-)
G184217 plcb4 non-coding upstream 81169 14222975 ~ 14225219 (-)
LOC120546499 NA non-coding upstream 96620 14238426 ~ 14243275 (-)
G184224 NA non-coding upstream 107408 14249214 ~ 14328936 (-)
G184286 NA non-coding upstream 251641 14393447 ~ 14394111 (-)
mfsd2b mfsd2b other downstream 627879 13473683 ~ 13491143 (-)
fkbp1b fkbp1b other downstream 650957 13458602 ~ 13468065 (-)
runx2b runx2,LOC102312376 other downstream 815238 13255885 ~ 13303784 (-)
hmgn3 hmgn3,LOC104958971 other downstream 903122 13145464 ~ 13215900 (-)
LOC120547209 NA other downstream 1111154 12960498 ~ 13007868 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other upstream 330395 14472201 ~ 14498370 (-)
naa30 naa30,LOC102795089,LOC104960600 other upstream 429574 14571380 ~ 14612946 (-)
LOC120547045 LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 other upstream 515371 14657177 ~ 14667601 (-)
rps29 NA other upstream 968434 15110240 ~ 15111479 (-)
si:dkey-177p2.18 LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 other upstream 1647020 15788826 ~ 15795638 (-)

Expression


Co-expression Network