G184217 (plcb4)


Basic Information

Item Value
gene id G184217
gene name plcb4
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14222975 ~ 14225219 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU249466
ACCGGCAGTTAGGCTACAAAGGCTTCAGTTTAGCAATTCAGAGGGCTGCTGCCCCTCTGGATCTGGTCTCACCGCTCATGGATGAGTTTGAGCTGCATGGTCTGCTGCTCCTGGACAGTGGTTAAGAGTTTCTTGAGGTGTTCGCACTGCTGTGCGACGTGGCTGTCCTTCATCTCCTGCTCCTCGCTGCTGTGACTACTGATCAGCTCTGACCACTCTTTAGTGTGCTGTGCTGTGATGTCCTTTAcCTTGACTTTGTGATCGGCAATCAGTGTTTGGATCTTATCCTCCGTCTCCTTCTTCAGCTCTTGGCAGTTGTTTTCCCCCCGTTTCTTGATGGCTTTCTCTAATAGTTTCTCCAGGGTTGTCTTCTCCTTATCATGCTGAGACACCATCTTGTCCATCTGGGTGCAGTGGGCTTTCTGCATTGTGTTTTGATCCTTTGACTGTTTCTTCTTTAGAGTGTTGAGCTCCTTCTGTTGCTTTTTAAGCAATTTAAGGTACGTCTTCATTTGTTTCAAGTCATCAATGCTGACATTAGGCACGAGTGCAT

Function

symbol description
plcb4 Predicted to act upstream of or within intracellular signal transduction. Is expressed in spinal cord. Orthologous to human PLCB4 (phospholipase C beta 4).

NR:

description
PREDICTED: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249466 True 553 lncRNA 0.48 5 14222975 14225219

Neighbor

gene id symbol gene type direction distance location
bmp2b bmp2 coding downstream 235574 13981265 ~ 13987401 (-)
fermt1 fermt1 coding downstream 265837 13946704 ~ 13957138 (-)
trmt6 trmt6 coding downstream 278142 13938613 ~ 13944833 (-)
LOC120546266 slc23a2,LOC100699458,LOC101468039,LOC108231760,LOC106518547,LOC102297661 coding downstream 304851 13911571 ~ 13918124 (-)
gpcpd1 gpcpd1 coding downstream 312843 13889340 ~ 13910132 (-)
pak5 pak5,LOC102790572 coding upstream 19222 14244441 ~ 14322141 (-)
LOC120547016 LOC103375044,LOC104947369,LOC101079388,LOC102209315 coding upstream 110420 14335639 ~ 14359390 (-)
magl NA coding upstream 135294 14360513 ~ 14378555 (-)
LOC120546406 NA coding upstream 154795 14380014 ~ 14381177 (-)
LOC120546407 NA coding upstream 162301 14387520 ~ 14388443 (-)
G184204 plcb1 non-coding downstream 81169 14119022 ~ 14141806 (-)
G184162 NA non-coding downstream 380498 13842272 ~ 13842477 (-)
LOC120546199 NA non-coding downstream 824400 13339183 ~ 13398575 (-)
G184049 NA non-coding downstream 904045 13318488 ~ 13318930 (-)
G184026 NA non-coding downstream 972539 13249591 ~ 13250436 (-)
LOC120546499 NA non-coding upstream 13207 14238426 ~ 14243275 (-)
G184224 NA non-coding upstream 23995 14249214 ~ 14328936 (-)
G184286 NA non-coding upstream 168228 14393447 ~ 14394111 (-)
G184289 NA non-coding upstream 183769 14408988 ~ 14409257 (-)
G184290 NA non-coding upstream 189037 14414256 ~ 14416171 (-)
mfsd2b mfsd2b other downstream 731832 13473683 ~ 13491143 (-)
fkbp1b fkbp1b other downstream 754910 13458602 ~ 13468065 (-)
runx2b runx2,LOC102312376 other downstream 919191 13255885 ~ 13303784 (-)
hmgn3 hmgn3,LOC104958971 other downstream 1007075 13145464 ~ 13215900 (-)
LOC120547209 NA other downstream 1215107 12960498 ~ 13007868 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other upstream 246982 14472201 ~ 14498370 (-)
naa30 naa30,LOC102795089,LOC104960600 other upstream 346161 14571380 ~ 14612946 (-)
LOC120547045 LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 other upstream 431958 14657177 ~ 14667601 (-)
rps29 NA other upstream 885021 15110240 ~ 15111479 (-)
si:dkey-177p2.18 LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 other upstream 1563607 15788826 ~ 15795638 (-)

Expression


Co-expression Network