LOC120547045 (LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714)


Basic Information

Item Value
gene id LOC120547045
gene name LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14657177 ~ 14667601 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU249642
AACAGATATGTTGCGATACTAGCTACACACTAGCATTAAAGCCACGAAAAGATGCGCCTTTACGggattaaaacaataaaacaaacaacgaGAAGTCTGGAAAAACTTTGCCCAACTGTGCCCAAACTTTGATAGGCTACAACCCAAATCACTTCCCTTCAGTTTCGAGTGTGTTAGCATTGTTTTATCTCACCATTATTGCCATTGGacgcgtttttttttcttctggagCAGTCCAGTCTGATGAATTCACCGAAAAAAGACGGCGATGATGATGTGCCCGTTAAAGACCCGGTAAAATACGGCGAATTGGTCATTTTGGGGTAAGTCTCTTAAAACCTGATAGTAAAATTGTGTAGGACTGAGAAACGCTCCAGCGGCAAAATTAACGTTTAATATGCAGCACAATAAACCAACAGATGACGTGTGAGTTCAGGTTTAATCCAC
>XM_039782416.1
TGTTGTATCCTATGCTACTGAACAGATATGTTGCGATACTAGCTACACACTAGCATTAAAGCCACGAAAAGATGCGCCTTTACGggattaaaacaataaaacaaacaacgaGAAGTCTGGAAAAACTTTGCCCAACTGTGCCCAAACTTTGATAGGCTACAACCCAAATCACTTCCCTTCAGTTTCGAGTGTGTTAGCATTGTTTTATCTCACCATTATTGCCATTGGacgcgtttttttttcttctggagCAGTCCAGTCTGATGAATTCACCGAAAAAAGACGGCGATGATGATGTGCCCGTTAAAGACCCGGTAAAATACGGCGAATTGGTCATTTTGGGgtACAATGGCTCTCTTCCAAGCGGAGACCGTGGGCGTAGAAAGAGCCGCTTCGCTCTGTATCGAAGGGCCAAGGCCAACGGTGTCAAACCCAGCGCTGTGCACATCCTCAACACACCACAGGACAGCaagGCTGTCcacagcagggggcagcacaGCATCTCTTTTACTCTGTCCCGTAACCAGACAGTGGTGGTGGAGTACTGCCATGACAACAACACAGACATGTTCCAGATTGGACGCTCCACAGAAAGTCCCATTGACTTTGTGGTGACAGACACCTCCGGAGGGGGGAAGGAGGGGGAGGACCCCTCCATTGCTCCCAGCACCATCTCGCGTTTTGCCTGCAGAGTGGTGTGTGAACGCAACCCACCTTACACTGCACGTATCTACGCCGCTGGCTTTGACTCTTCCAAAAATATCTTCTTAGGGGAGAAAGCAACAAAATGGAAAAACCCTGATGGGCATATGGACGGCCTGACCACCAACGGGGTGCTAGTGATGCACCCGGAGGGGTTCCCAGAGGACACTGAGCAGATGATTTTGATCGACTGTATGGTGTTTCGTCCATTATTATCTCTGCAGGCCGTAGGGGAGAGCAGTGCGCTACGTGACGGCTCCCTGGTTGACCTGTGCGGTGCCACCCTGCTGTGGCGTACAGGCGAGGGGCTCATGCGCGCTCCCACCCTGCGTCACCTGGAAGCACTTCGCCAGGAGCTCAACGCGTCCCGGCCCCAGTGTCCCGTCGGCCTCAGCACGCTGGCCTTCCCCAGCCTGCCGCGCAGCCACAGCCTTGAAGAGCGTCAGCCTTGGGTCTACCTCGCTTGCGGCCATGTCCATGGACGCCACGACTGGGGCCAGAGATCTGAGGGAGTGGAGGTGCCGGGAGAGGGCGAGGGTTCCACAACCCGCCGAGAATGTCCCCTGTGCAGGAGCGTGGGTCCCTACGTGCCCCTGTGGCTGGGCTGTGAGCCTGCTGTGTACGTGGACGCCGGAGCTCCTACTCACGCTTTTGTGCCGTGCGGCCACGTCTGCTCCGAGAGGACAGCCAGGTATTGGGCTGAGACCCCGCTTCCTCACGGGACGCACGCCTTCAGACCCGTGTGCCCCTTCTGCTCCTCTGCCCTCAGCACCCCCGGCTGGACGCGGCTCATCTTCCAGGGCCCCATCGACTAGTCGCCACTCCTCATCAACCACTCTCACAGTAACAGAAAGACGCCTGGGCTACATTCATGTTGCAGACGTGGGTCAGTGTTCAGTAGGGATAGGTAATTGATTAGGAACGCATGTGTGCTCTACACTCGGGCCACACACTGTGTATAACAAACACTGTCCAACGTTGTTACTGAATGGAGCTCGAAGCTGAATCCTTCCCGTTCTTTATCCTTCAATTCTTGTTGACTGgtataagatctggtgaataggTGCAAAATAACAGAATAATCAATAGTGTCATGTGGACAGTATTTACTCTAAACTCTAACCCTCTGTCAGGCATGATTGTGCTGTTTTTCATTCCAACCAAACCCTACACTTTCACTGATTACCTAACCTTCAAGTCAAATTGTATATAGACACGAGCTTAAACGATGCTGCTTGACCCtttttaaacaattatttttactCCATTATCAAATGACTCAACCTCCCACAAATTTTAAACGATGTCATACGAAACAAACCGATCCAAACACTTTTTATTTGTCTCTTTCAGAAGCCATGTATAAAACGACAAGTAgctttttgcacacaaaaaaaaaaaaggagtagcCTTTTTACTCAGTTCCTCTGCAGCGTCTTACACGTCTGCAGCGACCGCGTGTCCTTAACTCGGTGAAACGCCGCCTCTTGCACTTCTCGGCCTGACATCCGACCACTTCTTAATTTCGAAAACATTGTTACTGTAATTGTCGTGAAATGCTCGCCACTCATCAAACAACACAACCCGCCTGGTCTCAGCTTCTGCATAAACCACCTTCGCCTTTATTTCAAACCAAGTCTCTTTATAGATTTGCACGCTCACTTTCCTGTCTTCCTTCCCTGAATGACCAGCTGATTTATATTCATAGCTGTATTCTCAGCCGGCCATGTTAACTACTTATGGTAAATGTGCTTTACAAGGTGAGATCAGAGGCGTGTGCTTCGATCTAGCTTTTCAGGTTCCCAGCGATTCATGAAGGGGAAATTATTAACCATCATAAAATGAGTATATGCAGTTTTCATCTTTTGTCTTCGTGCATCATTTTTAGTGTGAAATCTATGCAGAGAGAGACCCCATAAATGAGACCCCCTTGTGTAGTATTAGGTTGGAATGAAAAGCTGCAGACTCTCTGATTATCTCTGAAGGGAACACTACACGCTGTATGACCGCACCACAAAGAATTCACCTCTTAAGGCCAGATCTCATCCTGATTATCAAGCAGACCGAGGATAAGCACGGGCTGGGAATGAAACTGGGTAAAATCCACTATATAACTCTGCAGCAATAATAGCACTCCCATATATATAAGCTAGATGTATCGCTCTGTTTAGCCAAGTGATAGGTCGGCGGTCGCATTGGACATAGCTGAAATGGTTTCCAGGTTAAGGGCTCAACCAGAGGCGTGTTCAATATCAGGATTTATTTCAtcgtggtgttgtgtgtgtatgtgtgtgtgtgtctgtgtgtgtgtgtgcgcgtgtgtgatGTAACCAAAGCACTAGAATTTAAAGATGAGCAACTGAATCAGTGATTAAACACACAACATGTATTTAAATACTCATTTTAGATGCATTAATAGCCTAAGCATGCTAACAGAGATTAGCATGTTTAGGCTGCAGAGGAATACATCAGCTGTCACAAAAGGACATGTTTTGACGCTCGTGTTGTGTTAATTTGAACACACTTCTGGTTACTGAATTATGTGAAACAGGGTCCATGTTTGCATGGTGGAGTGTCAAAAAGGTTTGACCTTGCATAACCTCAAAAGAGAActtcttttttgtttcaaaGAAAACTATTTTGTTAGAAAATGGGGAGGGATTTATTTGGGGGAAGCGGGAGGAATTCTTTTAGATgttcagtgtttaaaaaaacaactatttttctaactgataattgGTTTTAGTTAACTAATTGTTACTCAGTGTATGTTTCCGAATATTCTCGTGTGGTATCTAGGAGAGCTTGTGAGTGAGACAACATTGCCAACACTGTgtccaacaaacacacacttaacaCACTGCtaccgttaaaaaaaaaaaaaagagaaaaaaaaaaaacattgccc

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase pellino homolog 2-like

GO:

id name namespace
GO:0008063 Toll signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249642 False 447 lncRNA 0.41 1 14667135 14667581
XM_039782416.1 True 3610 mRNA 0.47 7 14657177 14667601

Neighbor

gene id symbol gene type direction distance location
actr10 actr10 coding downstream 64942 14584030 ~ 14592235 (-)
cipcb cipc,LOC101061969 coding downstream 90646 14561407 ~ 14566531 (-)
znf410 znf410,LOC102793462 coding downstream 96717 14548038 ~ 14560460 (-)
LOC120547074 samd15,LOC102792272,LOC106518567 coding downstream 127824 14525235 ~ 14529353 (-)
lrfn5b LOC104919828,LOC103359906,LOC102792771 coding downstream 133006 14509448 ~ 14524171 (-)
arf6a arf6.2,arf6,arf6a,LOC106518576,LOC104956700,LOC101063995,LOC106608083,LOC105893149 coding upstream 9939 14677540 ~ 14680093 (-)
fkbp3 fkbp3 coding upstream 35866 14703467 ~ 14706436 (-)
LOC120546409 mdga2 coding upstream 124512 14792113 ~ 14929662 (-)
wdr20b wdr20,LOC104961916,LOC103369949,LOC101068631,LOC101475300,LOC102799324,LOC101173269 coding upstream 454228 15121829 ~ 15128493 (-)
LOC120546952 LOC103369945,LOC104955612 coding upstream 531828 15199429 ~ 15201090 (-)
G184346 NA non-coding downstream 930 14655657 ~ 14656247 (-)
G184306 NA non-coding downstream 163609 14491099 ~ 14493568 (-)
G184295 NA non-coding downstream 218222 14432231 ~ 14438955 (-)
G184293 NA non-coding downstream 225005 14427804 ~ 14432172 (-)
G184292 NA non-coding downstream 232330 14423153 ~ 14424847 (-)
G184356 NA non-coding upstream 4293 14671894 ~ 14677060 (-)
G184360 NA non-coding upstream 21705 14689306 ~ 14689940 (-)
G184354 NA non-coding upstream 32083 14699684 ~ 14702181 (-)
G184381 NA non-coding upstream 373708 15041309 ~ 15041536 (-)
LOC120546290 NA non-coding upstream 396237 15063838 ~ 15068284 (-)
naa30 naa30,LOC102795089,LOC104960600 other downstream 44231 14571380 ~ 14612946 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other downstream 158807 14472201 ~ 14498370 (-)
mfsd2b mfsd2b other downstream 1166034 13473683 ~ 13491143 (-)
fkbp1b fkbp1b other downstream 1189112 13458602 ~ 13468065 (-)
runx2b runx2,LOC102312376 other downstream 1353393 13255885 ~ 13303784 (-)
rps29 NA other upstream 442639 15110240 ~ 15111479 (-)
si:dkey-177p2.18 LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 other upstream 1121225 15788826 ~ 15795638 (-)
LOC120546224 NA other upstream 1398253 16065854 ~ 16068309 (-)
LOC120546332 akap7 other upstream 1478989 16146590 ~ 16188330 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other upstream 1823049 16490650 ~ 16517874 (-)

Expression


Co-expression Network