G184406 (LOC107378075,LOC100701982,LOC107704376,LOC101474541)


Basic Information

Item Value
gene id G184406
gene name LOC107378075,LOC100701982,LOC107704376,LOC101474541
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 15135469 ~ 15138313 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU249730
tttgattaaaaacaacttaaatGAGCCCTTACAAAGAGCGTGATGGGATAGCCAATGAACTGTGAGTGCTTTTTAACGATCTCTTTGATTCTTCGCTCCTCAATGTATTCCATCTGGTCTTCTTTCAAGTGCAGGATCACCTTGGTGCCACGCCCCAAGGGCTCAGAGTTGTCCACTTTAACTGTGAATGAGCCTCCAGCAGAGGATTCCCAGGCGTACTGCTCGTCATCATTGTGCTTGGTTAAGACTGTCACCTTCTCAGCCACGAGGTAGGCAGAGTAGAAACCCACACCAAACTGACCGATCATGGAGATGTCGGCTCCAGCCTGCAGAGCCTCCATGAAAGCCTTGGTGCCAGACTTGGCGATTGTGCCCAGATTGTTGATCAGATCAGCCTTGGTCATGCCGATACCCGTATCAATCAGGGTCAGGGTGCGTTCCTCTTTGTTGGGAATTATTTCGATTTTGAGATCCTTGTTAGTATCTAGCTTGGTGGGGTCAGTGAGACTCTCATAGCGGATTTTGTCCAGGGCATCTGAGGAGTTGGAGATAAGCTCCCTAAGGAAGATCTCTTTGTTGGAATAGAAAGTGTTGATGATCAGGGACATCAGCTGAGCAATCTCAGCCTGGAATGCAAAGGTCTCAGCCTCCTCCTCCATTGGTTGGTCGTGTGATTCAGGCATCTTGACCCTCAGTGTATGGAAAACTCCACTGTGAAATGTATGGAAGTCGTTCCAGTCGCGG

Function

NR:

description
PREDICTED: heat shock protein HSP 90-alpha

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249730 True 744 lncRNA 0.48 4 15135469 15138313

Neighbor

gene id symbol gene type direction distance location
wdr20b wdr20,LOC104961916,LOC103369949,LOC101068631,LOC101475300,LOC102799324,LOC101173269 coding downstream 6976 15121829 ~ 15128493 (-)
LOC120546409 mdga2 coding downstream 205807 14792113 ~ 14929662 (-)
fkbp3 fkbp3 coding downstream 429033 14703467 ~ 14706436 (-)
arf6a arf6.2,arf6,arf6a,LOC106518576,LOC104956700,LOC101063995,LOC106608083,LOC105893149 coding downstream 455376 14677540 ~ 14680093 (-)
actr10 actr10 coding downstream 543234 14584030 ~ 14592235 (-)
LOC120546952 LOC103369945,LOC104955612 coding upstream 61116 15199429 ~ 15201090 (-)
slc25a47a slc25a47 coding upstream 133865 15272178 ~ 15276579 (-)
syndig1l LOC108231752,LOC106536771 coding upstream 209447 15347760 ~ 15384587 (-)
ino80 ino80 coding upstream 467755 15606068 ~ 15652295 (-)
vps18 vps18 coding upstream 515589 15653902 ~ 15659491 (-)
LOC120546290 NA non-coding downstream 67185 15063838 ~ 15068284 (-)
G184381 NA non-coding downstream 93933 15041309 ~ 15041536 (-)
G184354 NA non-coding downstream 433288 14699684 ~ 14702181 (-)
G184360 NA non-coding downstream 445529 14689306 ~ 14689940 (-)
G184356 NA non-coding downstream 458409 14671894 ~ 14677060 (-)
G184417 LOC101473650,LOC102776111,LOC103369946,LOC102310296 non-coding upstream 30823 15169136 ~ 15173640 (-)
G184420 NA non-coding upstream 35398 15173711 ~ 15174119 (-)
G184452 LOC103369942,LOC106518591 non-coding upstream 144936 15283249 ~ 15288885 (-)
LOC120546341 NA non-coding upstream 558187 15696500 ~ 15700999 (-)
G184662 stx7 non-coding upstream 596105 15734418 ~ 15735282 (-)
rps29 NA other downstream 23990 15110240 ~ 15111479 (-)
LOC120547045 LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 other downstream 467868 14657177 ~ 14667601 (-)
naa30 naa30,LOC102795089,LOC104960600 other downstream 522523 14571380 ~ 14612946 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other downstream 637099 14472201 ~ 14498370 (-)
mfsd2b mfsd2b other downstream 1644326 13473683 ~ 13491143 (-)
si:dkey-177p2.18 LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 other upstream 650513 15788826 ~ 15795638 (-)
LOC120546224 NA other upstream 927541 16065854 ~ 16068309 (-)
LOC120546332 akap7 other upstream 1008277 16146590 ~ 16188330 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other upstream 1352337 16490650 ~ 16517874 (-)
gpatch2 gpatch2,LOC102785715 other upstream 1687339 16825652 ~ 16835983 (-)

Expression


Co-expression Network