G184452 (LOC103369942,LOC106518591)


Basic Information

Item Value
gene id G184452
gene name LOC103369942,LOC106518591
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 15283249 ~ 15288885 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU249791
GCagaatcattttttattttgccaTTTGTACAGATCATCAGTGACAAATCTAGACAAATAGGTTATGTCAtgattatgttaaaaaaatatgtctCAGTTTTTCAGTTAAAATCTCTTCAGTGTAACAGCCAACTCAAACTGATGAAAGAGACTTTAAAAACTGCGTAAACTCAGACATTCAGGGAACCACACAACTACCTCAGACTGCaaaatatatgtactgtatatatatttacataacaGAATCTCACATTAACACAGTTATATCCTGTACATATTGCATCTTTCACATCAGCTGGACTACATGTTAGCTGTCAAATGGCAATCACCAAAAGTTTCAGATGTAATCTACCTTACAGTCAGAGAGGTAACAGTCACCGTTCAAGAGGTGGAATAATTGAGTAAACACAAGCAACTTCTACAGACATACTGTACCAAATATCCCTTTGCACTTTCTCATCATCACCCACAATCAACCAGAATACAGTTTTTCAGCAGCATTGAACAATTCAAACTAGtgacatttaaatttaaaacaacaTGATTCCAAGAAATCATTGTATCCCTCAAGTCTGAGTTTTAGTCCAAACATCTGTGAGTGAATACAGCTGTGTTACATTCAACATACGGAAGGTTCAAGTGCATCTGGGACTTTCTGCTCTCCAACAGCCCGTCATAGAGTCTTCATAAACAAAATGACAACTGTAGCTTGATTTGTTGCCAGGTTTACAACTTCAGACAAGATCTCAGAAAAGCATTCAGGGGAACGGGTTGTCAGTAGTACCGACGGTTTACGGCTGATGGGAACTgactaggattgggcatcgagaatcGGGTCCAACTTGGAATGgtttcaaaaatgaaaaactggcaaaaattctctttttctttttttaaattgaaatcatttggaaaatttggttttgaatctGATcatctagggctgggcgatatggagaaaatcaaatatcacaatattttttactaaatacctcaatatcgatactgcaacaatattgtagtgttgactattggtgctttcactaaatatttacacaatgagatttttgataaataatcatcagtaatgtggatataatgactaagttggtaaacacaaataacagaacagtccggtaagttcagaaaagtacatcactttactgtaatgcagcctttaaaaccaggaaaaaacaacacttatgccatattacgatatccaaaatctaagatgatatctagtctcatatcacaatatcgatataatattgatatattgcctaGCTCTATGATCATCGGTcccaaatttaacatgcacaaTTTTTGGTTCCTGTAGCGGCCACCGTACTTGCAGGCGCTTGTTATAAGTAAGctgcgctctagtgtggctttacttttcattgaaaaagtcaccattgaatcaaaattaAATTTTCCTCtcatctgtgaaataagcaactccacccatagatatagaacaagactccacccctcaaagaatcggaatcgatgagaaccggaatcgaatggaagaatcggaatcagaattgttaaaatcaaatgGATGCCCAACTCTAGAACTGACGCATTAGCCTTTTTGTAGGGGAGTATACTTTGATTGGTTTACAGCAAGATATTCAACATTCAGGCATAAAATatcggaagaaaaaaaaaatctgatactgaccacacacatgcagaaagcAGACAACCACTCATTAACAAAAAACTGATTacgtttctcatactgcccaatGCTGCAGTGCTCAGTCTGataaacctgtttgagtcgtgatTCACTCAGATCTTTCACCcgagtctttaaattgactcaTGAATCACGAGTCTCTAGTATAACTAAATctgatcagttgagtcctactacaattcaatctaaaatgatagcagcgccacacacaaacctcttgcaacattagctactactagGGTTGCAAAGGGGTGGAAATTTTCTGCTAAATTTCcagaaactttccatggaaagtttagctggggaattttggaaacattccaattttgatttactatggttagtgggctatacaattaacacacaaaGGTTAATAATAGCAATGGGTTATGTATTAGCCCTGTTATAGACTAACAGTATTATAACaatcaatattaaaaatatccagtttattcccattaattcccatggaaagtttccaactttgaaaattcccagaattttgcaaccctagctactactagtcctagccatcttagctgccaaaAGCTTTATGACTTACAATTTCATAGGCAACAACAACTCCACAAGTCATCTCAAGcgactgagtgagcagagagacagtccaAGACAGGTTATAGGAACTTCCCGACCCACAGACTCAGAGctggaaacattgcaagctcgcaGACCATGGGACTAACTCGAGAGTCCTCGATGACTAGTGAGTTGTTGATGACTAGCAAGTTATCGATGATTCACGAGTTCTCGCATGAGTCAGTCAATCGCACGAATAAGCCGGCTATGAGTAGTATGAGATCAATACTGacaagtgactcgcacaacccggatcagtttagtgagtgactcagaataacctgaaTCCTTAAAAAgaatcgagtttgccaggcctacAGTCTGAGCtacagtctgctctgattggtcagctggcccactctgttgtgattggtcaaccaaattcagAACAAGCCCCTGGGTgggctgtgcttgctcaggcagcacctatGGGCAGCAAATATGATAAACTGGGCTGGCATTCTCAATTAGTGGCATCACTAATTAAAGACTTCCAAACAGAAATGTGGGAAGGCGTATCTaggcagttaaaaaaaagtgctgtctgtgggagagaaaaAGGAATGAGGGCCATCCTAAATGCTGACCCTCCCAATTTTAACTTTTTCTAAAACTTTAAAGAGAGACCACCTAGCATGCATTTCTGACCCTACAATAATCATATAATGTGCAGCTTTAAAAGCtattttaaaactaaaatttacaaaaataaagtaaaatagtGGAACAAGTGTGGTGCTACACCCACATGTAGCGCCATGTTCCACTTCTGGATCAGGCCTTTATTACAGTAGTACAGTTACAATGATAACACTtcacattattaaaaaaaacaaacatgctaaacAGACCAAACAAGACCTAACACCACCTACCATCCTGATTCACACATAGACCCACTATACATTCAGAACAGTGGATTTCTGTACTGACATGTGCTGTATGGAGTAATAGTGCTTTAGTTAGGATTAGATTATAGCTGCAATATGTTATTTGGTTAGAAAGCAGACACAAGTGATAAGTTCTTTGTACTTATCAAATGCTACATTCCATCGCCCTCTTGCTTGGCTCCTCAGAGGATACAGTTCAGCTACAAACAGGTGCTTCAGCTTccttaaacaaaataaaaaatgtcatattataAGGCAGGGAAATGTCTCcaattgacatttaaaaacagaactaaaaccaatgatatatacaggTGCAGCGAAACACTGCACATTTCAAGATAGATCAACCTTCAGTGTCTACACTGTACACACCATGTAGCCACACCCTTAGTTTTGTGGCTCAGTAACAAGTCATAATCAGTGTCACACAAGATCATTCTCACAGATAAAAGCTGTGTTCAAAACTTTCATGAATCTCATAGCTCCATTTTCCCCATCTTATCATAGGTAACACCATCCCCTTGTACAAGTCTGCATCTTCAGTGGCAAACCTAAAACTTAAATTATagctaaaaataaatatagttGCCTTCGTTTCCTTTTTGACATGAAAGTAAAAACACGTGTTTATATAaaccaggtttttttttctcaaaattggaaatgggGGGTCTGGTGTGAGACTGAGTCAGACATTTATAAAGggtttgtatgtttatataaTCCATGCTCCTGTAAAGTGCCCAGGTTGAGACCTCTGTGCTGTCACAGGCTGGAGGGTTGGGCCTGCTGCTTTATCTGTGTGTGGTGGCTTGGCTGAGCCTGCTCACAGTCTTTAGGCCCCTCCTCCACCCCCCGGGCGTACATGAGGATAAGGGTGACGGTAGCAAAGGTAGTTGCATTCACAGGGAACGCCCGTAGCAGCGTGGAGGTGAGGCCTCGTGTGAACACCATGTAGCCCTCTCTCCTGATACTCTGTCGCACACAGTCAGCGATGCCACTGTACTGGTTGACTCCACCCACCCCGTCTGCCTGCAGCCGCGATTTGATCACATCCACAGGGTAGGTGGAAAGCCAGGAGGCAATGCCAGCCATGCCCCCTGCAAACAGCAGTTTGGGGATCATGTAGCGGTCATCCGGCTCACAGCCAAGGCTGCGCGTCATCACATCATAGGCCAGGAAATACACTCCAAAGCCAGGTGTCTCGCGGATTAATGTCGTGACCATGCCTCTGTTTACGCCCCGCAGACCCTCCCGATTGTAGATGCGTGCCAAGCAGTCCAGGGAATTCTTGTACAACTTCCTAGAAGACTTCTTCTCCCCAGTACCCTGCATTTGCATGCGGGTTTTAGCCAGCTCCATGGGGCAGCAGATGACACACTGGATGGCACCTGCTGCTGCACCAGCAAGGAACTGGTTCATGGGGGTGTCCTGTCCCAGCAACCGCATGGTGTTTCCCTGAACACCAAACACTATAGCATTGATGAATGTAAGGCCCATCATGGGGGATCCGATGCCTTTGTACAAACCAAATACCTTGCATAGATGTCATCGTGAGCAGCAGGCTCACAGCTTTACAGCCCAGGAAGGTAGATGACACATAGCAACAAACCAcctgaagaaataaaaacatgtatttcaaTAAACTCTATGGACTGGAAAAACTTCACATACGTCAGAGCCAAGCTAACAAAGCAAACATAAACATAGTCACTTATCAGTAATATTACTGCTTGCATATATTAGCATTAGACTTGTATGGGAAATAAATCCACGTACCGTCTCCTGCCGTATGATGGACTGGAAACAGTGATAGGTCCCACGGTACAGAGGCTTATCAACACTCTGGACCTGCAG

Function

NR:

description
PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein CACL-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU249791 True 5055 lncRNA 0.41 2 15283249 15288885

Neighbor

gene id symbol gene type direction distance location
slc25a47a slc25a47 coding downstream 6670 15272178 ~ 15276579 (-)
LOC120546952 LOC103369945,LOC104955612 coding downstream 82159 15199429 ~ 15201090 (-)
wdr20b wdr20,LOC104961916,LOC103369949,LOC101068631,LOC101475300,LOC102799324,LOC101173269 coding downstream 154756 15121829 ~ 15128493 (-)
LOC120546409 mdga2 coding downstream 353587 14792113 ~ 14929662 (-)
fkbp3 fkbp3 coding downstream 576813 14703467 ~ 14706436 (-)
syndig1l LOC108231752,LOC106536771 coding upstream 58875 15347760 ~ 15384587 (-)
ino80 ino80 coding upstream 317183 15606068 ~ 15652295 (-)
vps18 vps18 coding upstream 365017 15653902 ~ 15659491 (-)
pigh pigh,LOC102778419 coding upstream 388985 15677870 ~ 15680252 (-)
wdr21 dcaf4 coding upstream 399633 15688518 ~ 15694621 (-)
G184420 NA non-coding downstream 109130 15173711 ~ 15174119 (-)
G184417 LOC101473650,LOC102776111,LOC103369946,LOC102310296 non-coding downstream 109609 15169136 ~ 15173640 (-)
G184404 LOC103369948,LOC101169258 non-coding downstream 144534 15132217 ~ 15138715 (-)
G184406 LOC107378075,LOC100701982,LOC107704376,LOC101474541 non-coding downstream 144936 15135469 ~ 15138313 (-)
LOC120546290 NA non-coding downstream 214965 15063838 ~ 15068284 (-)
LOC120546341 NA non-coding upstream 407615 15696500 ~ 15700999 (-)
G184662 stx7 non-coding upstream 445533 15734418 ~ 15735282 (-)
G184668 ctgf non-coding upstream 483801 15772686 ~ 15775486 (-)
G184696 NA non-coding upstream 723615 16012500 ~ 16015535 (-)
G184699 LOC107390449 non-coding upstream 736333 16025218 ~ 16033730 (-)
rps29 NA other downstream 171770 15110240 ~ 15111479 (-)
LOC120547045 LOC103359896,LOC104919819,LOC100704859,LOC107378087,LOC104956714 other downstream 615648 14657177 ~ 14667601 (-)
naa30 naa30,LOC102795089,LOC104960600 other downstream 670303 14571380 ~ 14612946 (-)
G184299 LOC101066055,LOC100706360,LOC102203025 other downstream 784879 14472201 ~ 14498370 (-)
mfsd2b mfsd2b other downstream 1792106 13473683 ~ 13491143 (-)
si:dkey-177p2.18 LOC102081001,LOC102302990,LOC107088471,LOC105937616,LOC105357244,LOC102210773,LOC101470269,LOC104966503 other upstream 499941 15788826 ~ 15795638 (-)
LOC120546224 NA other upstream 776969 16065854 ~ 16068309 (-)
LOC120546332 akap7 other upstream 857705 16146590 ~ 16188330 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other upstream 1201765 16490650 ~ 16517874 (-)
gpatch2 gpatch2,LOC102785715 other upstream 1536767 16825652 ~ 16835983 (-)

Expression


Co-expression Network