cenpw


Basic Information

Item Value
gene id cenpw
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 16379479 ~ 16381856 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU250006
GCGGGAGATTGGAAGACGTAAACAAACTTTTTGTCGGCGTGAAGTTGAGCTTTTCAGTGAACATTTGCCAAAATGTTGAAGAAGGCGACCAAACtgaaatatataattaaaacgAAAACAAAGAGTAACATAAATGTGAGGCCGACGTCAGAGGCAATGATCGAACTCCTAACGCTGGTGTTTTTAAGCAGCCTGGCTGAGGAGGCGAAGGCTAAAGCTTTTGAAGAGAAATCTGCAACGATCCGAGCTCAACATCTCAGAGCAGTCTCCAAGaaaatgctgaaaaaatcAAGGGGGTGAAGACAGCGAAGTGCAACatcgtcatttttttttaacattatcatgaatgacagtagcaacattattatttttttaatatatagaatttgttttcttccaaaacttcctttttgagtttttta
>XM_039782792.1
AGAAGAAATTTTACCGGAAGAATGAGAAGCGGGAGATTGGAAGACGTAAACAAACTTTTTGTCGGCGTGAAGTTGAGCTTTTCAGTGAACATTTGCCAAAATGTTGAAGAAGGCGACCAAACtgaaatatataattaaaacgAAAACAAAGAGTAACATAAATGTGAGGCCGACGTCAGAGGCAATGATCGAACTCCTAACGCTGGTGTTTTTAAGCAGCCTGGCTGAGGAGGCGAAGGCTAAAGCTTTTGAAGAGAAATCTGCAACGATCCGAGCTCAACATCTCAGAGCAGTCTCCAAGaaaatgctgaaaaaatcAAGGGGGTGAAGACAGCGAAGTGCAACatcgtcatttttttttaacattatcatgaatgacagtagcaacattattatttttttaatatatagaatttgttttcttccaaaacttcctttttgagttttttattCTATCCCTTGTGTATCTGTTTTCCTGTCATAACggttttatgtcttttttttattaaagtctTGTGAATCTTG

Function

NR:

description
centromere protein W

GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
TU250006 False 422 lncRNA 0.38 3 16379507 16381781
XM_039782792.1 True 525 mRNA 0.37 3 16379479 16381856

Neighbor

gene id symbol gene type direction distance location
tpd52l1 tpd52l1 coding upstream 4265 16357559 ~ 16375214 (+)
rnf217 rnf217,LOC106571519 coding upstream 26824 16340938 ~ 16352655 (+)
med23 med23 coding upstream 252565 16109352 ~ 16126914 (+)
coq8aa coq8a coding upstream 337240 16016975 ~ 16042239 (+)
itpkb itpkb coding upstream 364620 15986083 ~ 16014859 (+)
LOC120547267 NA coding downstream 2415 16384271 ~ 16386778 (+)
LOC120547268 rnf146 coding downstream 5902 16387758 ~ 16390630 (+)
LOC120546559 LOC102791590 coding downstream 105158 16487014 ~ 16490639 (+)
pgm3 pgm3 coding downstream 136588 16518444 ~ 16523666 (+)
ccnc ccnc coding downstream 146133 16527989 ~ 16534031 (+)
G184618 NA non-coding upstream 22931 16291211 ~ 16356548 (+)
G184584 NA non-coding upstream 331798 16045809 ~ 16047681 (+)
G184540 NA non-coding upstream 451817 15926071 ~ 15927662 (+)
G184561 NA non-coding upstream 489894 15889365 ~ 15889585 (+)
G184526 sel1l,LOC104966051,LOC107585782,LOC107721334 non-coding upstream 580685 15797815 ~ 15798794 (+)
G184633 LOC101069623,LOC100711363,LOC102312356,LOC101478077,LOC102202636 non-coding downstream 29820 16411676 ~ 16413501 (+)
LOC120546561 NA non-coding downstream 111338 16493194 ~ 16516333 (+)
G184796 NA non-coding downstream 214084 16595940 ~ 16610380 (+)
G184851 naga,LOC104944830 non-coding downstream 343021 16724877 ~ 16726392 (+)
G184948 NA non-coding downstream 551840 16933696 ~ 16956864 (+)
LOC120546249 NA other upstream 411356 15914586 ~ 15968123 (+)
dpf3 LOC100693327,LOC101467145,LOC103380755,LOC104966071,LOC102779461 other upstream 659847 15694944 ~ 15719632 (+)
rhov rhov,LOC102778135,LOC100699098,LOC101469787,LOC102306362,LOC107602886 other upstream 715818 15660573 ~ 15663661 (+)
G184458 NA other upstream 1060643 15301925 ~ 15318836 (+)
LOC120546207 NA other upstream 1086227 15289674 ~ 15293252 (+)
G184628 LOC104949332,LOC106633454,LOC101477798,LOC102792991 other downstream 17582 16399438 ~ 16404077 (+)
vegfab vegfa other downstream 289730 16671586 ~ 16686079 (+)
si:ch211-57i17.1 LOC103363786 other downstream 383689 16765545 ~ 16779935 (+)
G184859 NA other downstream 443838 16825694 ~ 16833314 (+)
G184996 sec63 other downstream 911798 17293654 ~ 17295701 (+)

Expression


Co-expression Network