G184633 (LOC101069623,LOC100711363,LOC102312356,LOC101478077,LOC102202636)


Basic Information

Item Value
gene id G184633
gene name LOC101069623,LOC100711363,LOC102312356,LOC101478077,LOC102202636
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 16411676 ~ 16413501 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU250017
CTCCAACTCAACTATTTTCCTCCCCAGGATGTtggcctcctcctccaccaggcGGAGCCGGAGCTTTAGCTCTGACTCGCGGGTGGTGGGCGGACCCCCAGCTTCTCCTTTAGGATGGGTGCTGTCCAGTTCACCATAGAAGGAGCGGTACTTCTGCAGCTCTTGGTCTAGACGGTCCTTCTCTTTGTCAATTTTGGCCGTCTTCTTTCTCATAAGCACCGCTTCCTCTTTGATGAACGCTAGCTGGCACTTAAGGTCCTCATTGTCCTCCTCTGTAGGAGTCTGTGCTGATTTCCTGTCTGTCTTCTGGATGTCCTTGCTTCCTCTTCTCTTTTGAGActctttgtttttgtctagTTCATTCTGCAGGGCTTGTTTGGTCACTTCCACCTCTATGAGTTTCTGTCTCAGTTTTtcattctcctcctctgtctttgtgcGCTTCTCCTCCACCTTTTCCAGCTCGTGGTGCAGCCTCACAGACACATCCTTCGCTACCTTCAGGTCCTGCTCCAGACTCCTGAGCAGCTCCTCATCGATCTCTCCCGTCTGGGCGTAGCGCATCTTCTTCCTCTCAGCCTTCCTCAGACGATACTGCAGGATCCGGCAGTTTTTATTGGCTCTCTCCAGCTCACGCCTCATCTCCTGCAGCTGACACGTGTCTTCTTCGTAGAACGTGTCCCGCATCTCGTCCATCTCGGTCCTCATCTCCTCAATTTCACACTGGTGGGTGCATAGTAGAGATTATATTAATAGAGGTTAATATTAGGATCAACTAAACTCTGCTGTTTGGTTTTAGAATCTGACTTTTGACTCCACAGTCAGTAATGGATGTTTTGGACTTGAGCCAAATATAGTCAGCTTCAGACATGTGCACAAAATATCTGAATTCAAATTTATTTCATGTGCCAAAGACTGGA

Function

NR:

description
PREDICTED: protein SOGA3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250017 True 920 lncRNA 0.49 4 16411676 16413501

Neighbor

gene id symbol gene type direction distance location
LOC120547268 rnf146 coding upstream 21046 16387758 ~ 16390630 (+)
LOC120547267 NA coding upstream 24898 16384271 ~ 16386778 (+)
tpd52l1 tpd52l1 coding upstream 36462 16357559 ~ 16375214 (+)
rnf217 rnf217,LOC106571519 coding upstream 59021 16340938 ~ 16352655 (+)
med23 med23 coding upstream 284762 16109352 ~ 16126914 (+)
LOC120546559 LOC102791590 coding downstream 73513 16487014 ~ 16490639 (+)
pgm3 pgm3 coding downstream 104943 16518444 ~ 16523666 (+)
ccnc ccnc coding downstream 114488 16527989 ~ 16534031 (+)
faxca LOC104925628,LOC104963907,LOC103380784,LOC102789719,LOC101473580,LOC102289837 coding downstream 122810 16536311 ~ 16544495 (+)
tmem63a LOC104944870 coding downstream 175349 16588850 ~ 16599462 (+)
G184618 NA non-coding upstream 55128 16291211 ~ 16356548 (+)
G184584 NA non-coding upstream 363995 16045809 ~ 16047681 (+)
G184540 NA non-coding upstream 484014 15926071 ~ 15927662 (+)
G184561 NA non-coding upstream 522091 15889365 ~ 15889585 (+)
G184526 sel1l,LOC104966051,LOC107585782,LOC107721334 non-coding upstream 612882 15797815 ~ 15798794 (+)
LOC120546561 NA non-coding downstream 79693 16493194 ~ 16516333 (+)
G184796 NA non-coding downstream 182439 16595940 ~ 16610380 (+)
G184851 naga,LOC104944830 non-coding downstream 311376 16724877 ~ 16726392 (+)
G184948 NA non-coding downstream 520195 16933696 ~ 16956864 (+)
G184995 NA non-coding downstream 867614 17281115 ~ 17299420 (+)
G184628 LOC104949332,LOC106633454,LOC101477798,LOC102792991 other upstream 7599 16399438 ~ 16404077 (+)
nkain2 nkain2 other upstream 19825 16248094 ~ 16391851 (+)
cenpw NA other upstream 29820 16379479 ~ 16381856 (+)
LOC120546249 NA other upstream 443553 15914586 ~ 15968123 (+)
dpf3 LOC100693327,LOC101467145,LOC103380755,LOC104966071,LOC102779461 other upstream 692044 15694944 ~ 15719632 (+)
vegfab vegfa other downstream 258085 16671586 ~ 16686079 (+)
si:ch211-57i17.1 LOC103363786 other downstream 352044 16765545 ~ 16779935 (+)
G184859 NA other downstream 412193 16825694 ~ 16833314 (+)
G184996 sec63 other downstream 880153 17293654 ~ 17295701 (+)
map7b map7,LOC107374525 other downstream 928336 17341837 ~ 17375059 (+)

Expression


Co-expression Network