G184948



Basic Information


Item Value
gene id G184948
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 16933696 ~ 16956864 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU250480
GCAGGCTATACGTTTATttcaagaaagaaaacagacacTTAATTACATAGACTTTTTAGCCAATTAAGAATAAGAAAATGATCCCAAAACTGAGCAGGCTATGAATTTATTTCAGGAAAGAAAACAGCCACTTAATTACATAGACTTTTTAGCCAATTACTCTTAaacttaaatattttattaaaccGTATcaatcagaaaacacaaaaatccAACAAATTAGGTTTTGCAATACATGTCAAggattccattccattccatacTATTCTTTCAAGCAGTGTAGTGAAGGCCAAGGAGTTCTGCATAGTAAATGCTTACAATCTTCCAAAGCACTAAATCTGAACTTTATCCCGTGGACTGTAGAGAAGTTTGTCATTAGCAGTGAAATGCATTTTGCCACCTTGTAGTATACATTAAATGTAAATCATTTCCAAGTTATGTTTATATGTtggaaaaataaaagcacaatgtTGCTTGGTTGCTAAAGACTTCGTACTATCCTATTGGTTGCATCTTAACCCATGTGGACCTGCTCCATTCAGTGCCGCCTACAGTGTTGTGCTAGTTGGGGTGTGTTTAGAAGGCTCTGAAAAGCTGGTTTGGCATGTATCCCAGGTGAAGGAAGGAAGATTGGGCTTCTCTCTCGAGGTTAGCCAGCTCCTGGACCGTCGGGGCCAGAATATCCACGTGACCCTTGTAGTTACCAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU250480 True 707 lncRNA 0.38 2 16933696 16956864

Neighbor


gene id symbol gene type direction distance location
fam228a NA coding upstream 53361 16876319 ~ 16880335 (+)
gnpat2 gnpat coding upstream 60588 16858208 ~ 16873108 (+)
lpin1b lpin1,LOC104949544 coding upstream 77083 16837534 ~ 16856613 (+)
wdr26b wdr26,LOC104925620,LOC103363787 coding upstream 170252 16746173 ~ 16763444 (+)
LOC120546775 adcy3,LOC102197140,LOC101471325 coding upstream 188866 16730063 ~ 16744830 (+)
nbas nbas coding downstream 8602 16965466 ~ 17134416 (+)
ppp1r14c ppp1r14c coding downstream 355610 17312474 ~ 17331367 (+)
mtfr2 NA coding downstream 421318 17378182 ~ 17391719 (+)
LOC120546616 pde7b,LOC102780239 coding downstream 450910 17407774 ~ 17430002 (+)
hbs1l hbs1l coding downstream 523334 17480198 ~ 17504874 (+)
G184851 naga,LOC104944830 non-coding upstream 207304 16724877 ~ 16726392 (+)
G184796 NA non-coding upstream 323316 16595940 ~ 16610380 (+)
LOC120546561 NA non-coding upstream 417363 16493194 ~ 16516333 (+)
G184633 LOC101069623,LOC100711363,LOC102312356,LOC101478077,LOC102202636 non-coding upstream 520195 16411676 ~ 16413501 (+)
G184618 NA non-coding upstream 577148 16291211 ~ 16356548 (+)
G184995 NA non-coding downstream 324251 17281115 ~ 17299420 (+)
G185022 NA non-coding downstream 436670 17393534 ~ 17397048 (+)
LOC120546618 NA non-coding downstream 473156 17430020 ~ 17447803 (+)
G185015 NA non-coding downstream 481825 17438689 ~ 17440600 (+)
LOC120546214 NA non-coding downstream 492666 17449530 ~ 17453062 (+)
G184859 NA other upstream 100382 16825694 ~ 16833314 (+)
si:ch211-57i17.1 LOC103363786 other upstream 153761 16765545 ~ 16779935 (+)
vegfab vegfa other upstream 247617 16671586 ~ 16686079 (+)
G184628 LOC104949332,LOC106633454,LOC101477798,LOC102792991 other upstream 529619 16399438 ~ 16404077 (+)
nkain2 nkain2 other upstream 541845 16248094 ~ 16391851 (+)
G184996 sec63 other downstream 336790 17293654 ~ 17295701 (+)
map7b map7,LOC107374525 other downstream 384973 17341837 ~ 17375059 (+)
G185145 LOC108242497,LOC106926748,LOC106945794 other downstream 712308 17669172 ~ 17686398 (+)
LOC120546940 NA other downstream 717529 17674393 ~ 17693634 (+)
G185237 NA other downstream 959989 17916853 ~ 17917248 (+)

Expression



Co-expression Network