G185039 (map7,LOC107374525)


Basic Information

Item Value
gene id G185039
gene name map7,LOC107374525
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17362009 ~ 17362903 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU250616
TCTTGTAGTGAaggtgtgtatgcatgtgtgtttatgttaagAGTGAAAACATCCCAATGTGAAAGTGTGTACAGAGCCATGTGTGTCAGAACCTGGTCTTCCTCAAGTTTCTGCCGCCGTTTCTCCTCCACGGCAGCCCGTCTCTTGTCCTCCTTTATCCTCTGCTCCTCCatctttttcctcctctcctccagctgCTTCTCATAGTGCTGCCTGGCTCGCTCCTCACGTGCCTGCCACTGGGCCTCCTTGACAGcaTTCTGTTTCTCACGCTCCACGCGGCGCTCACGGGCTAACCTCTGTCTCTCGTCGATCTT

Function

symbol description
map7 Predicted to enable signaling receptor binding activity. Predicted to be involved in microtubule cytoskeleton organization; protein localization to plasma membrane; and response to osmotic stress. Predicted to act upstream of or within several processes, including gamete generation; male gonad development; and response to retinoic acid. Located in cytosol and microtubule cytoskeleton.

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU250616 True 317 lncRNA 0.53 2 17362009 17362903

Neighbor

gene id symbol gene type direction distance location
iyd iyd coding downstream 51562 17307112 ~ 17310447 (-)
sec63 sec63 coding downstream 55783 17291166 ~ 17306226 (-)
scml4 LOC100701983,LOC102215682,LOC101464936,LOC102300852,LOC104950495 coding downstream 74368 17269861 ~ 17287641 (-)
lratd1 fam84a coding downstream 181298 17178364 ~ 17180711 (-)
ddx1 ddx1 coding downstream 396642 16956248 ~ 16965367 (-)
armc1l LOC103368599,LOC104950028,LOC108242485 coding upstream 12294 17375197 ~ 17378628 (-)
myb myb coding upstream 103015 17465918 ~ 17474896 (-)
LOC120546939 NA coding upstream 293751 17656654 ~ 17657876 (-)
LOC120547287 NA coding upstream 334535 17697438 ~ 17701407 (-)
rps12 rps12 coding upstream 397967 17760870 ~ 17763808 (-)
G185031 ppp1r14c non-coding downstream 29036 17312485 ~ 17332973 (-)
G184989 NA non-coding downstream 191747 17169689 ~ 17170262 (-)
LOC120547043 NA non-coding downstream 425828 16933693 ~ 16936181 (-)
G184903 NA non-coding downstream 537412 16824296 ~ 16824597 (-)
G184897 NA non-coding downstream 587738 16772721 ~ 16774271 (-)
G185054 NA non-coding upstream 33568 17396471 ~ 17399451 (-)
G185035 NA non-coding upstream 63301 17426204 ~ 17432964 (-)
LOC120546280 NA non-coding upstream 155868 17518771 ~ 17521010 (-)
G185094 NA non-coding upstream 162615 17525518 ~ 17527365 (-)
G185123 sgk1 non-coding upstream 202766 17565669 ~ 17578288 (-)
LOC120547341 NA other downstream 92375 17266359 ~ 17269634 (-)
gpatch2 gpatch2,LOC102785715 other downstream 526026 16825652 ~ 16835983 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other downstream 844135 16490650 ~ 16517874 (-)
LOC120546332 akap7 other downstream 1173679 16146590 ~ 16188330 (-)
LOC120546224 NA other downstream 1293700 16065854 ~ 16068309 (-)
tbpl1 tbpl1 other upstream 260221 17623124 ~ 17631351 (-)
zgc:153284 NA other upstream 401902 17764805 ~ 17766910 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other upstream 548367 17911270 ~ 17913036 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other upstream 1126912 18489815 ~ 18506198 (-)
LOC120546357 LOC106525279 other upstream 1277518 18640421 ~ 18647401 (-)

Expression


Co-expression Network