G185054


Basic Information

Item Value
gene id G185054
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 17396471 ~ 17399451 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU250631
AAAGGGGAAAAACAGAAattgatttcatttttgttcatTACCACAGCCAAGAAGTTGGCCTCTTCTTGGGTTGTGAAATGATCTTAGATGGTATAATTCAGATGTTACATAGACAGATATCTCTAATTCAACCAACGAGGATGGATTATCAAGTAccaaaaagaagaaggaaaagtcAATAACCCACGTCCTGTACAAGAGTCTCAAGAAAAGAGATTTCTATTGAATGTGTGGAAAATGCTGATGGATTTCCTGGTGTGGTCATCTATGACGATAAAACATTCCCCATTCCTTCTCAACAAGATGTCATAGAGTGGCATGCTTCAGGCTCTTACAGTTCTGTGCGACCTTTCCAAATTGCCCATGATGACAATGAGgaccctgccacactggattgGGATCCTCCAGAGACTGACAGTAATTTACCCCCTAGTcttcaggaggaagaggaggtgaaGAGGATGACTTGAGGCATCTACAGCCATAAAAATTGGCAAAGTGCAACTAAGCTTTTTGATATGCTGGTTCTCTATATTTTGTTTCTGGtcatatatttaattttttaatgcCATTTGAGCATTCACGAACACTTGTTGCTTGTCCAAACAAAGAGATACAGAATTGTATCTCCCTTACTATTTCCAGGCAACTGAGACTTCAGGATGTTACTGGtcccagccaagaaatagtctggaATATACCCCTGTGTAAGGAGGAGAACCTTTTTacactaacaaaaaaaaaagtgaataagcaAATTCACAAAAAACTGTCAAGCTATTGCTTTGAAATTAACCATGAACTACACTAAATCTTTCAGTTACCTCACATTAGGTTTGACTATCCAGCATATACAATGCTGCTCTGGTAACAAAGTACTCACAACAGGTTTACTGTGTGATCTGGATAACTGAGTTAAACCCAGGACCTTCACTAACCTGGCACATAGACCAGTGAAACTCCATGTAAAGATACTAATATcaaaacacaataataaatGTGTCATACTTATATTA

Function

GO:

id name namespace
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction
ko04672 Intestinal immune network for IgA production
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
TU250631 True 1016 lncRNA 0.38 5 17396471 17399451

Neighbor

gene id symbol gene type direction distance location
armc1l LOC103368599,LOC104950028,LOC108242485 coding downstream 17843 17375197 ~ 17378628 (-)
iyd iyd coding downstream 86024 17307112 ~ 17310447 (-)
sec63 sec63 coding downstream 90245 17291166 ~ 17306226 (-)
scml4 LOC100701983,LOC102215682,LOC101464936,LOC102300852,LOC104950495 coding downstream 108830 17269861 ~ 17287641 (-)
lratd1 fam84a coding downstream 215760 17178364 ~ 17180711 (-)
myb myb coding upstream 66467 17465918 ~ 17474896 (-)
LOC120546939 NA coding upstream 257203 17656654 ~ 17657876 (-)
LOC120547287 NA coding upstream 297987 17697438 ~ 17701407 (-)
rps12 rps12 coding upstream 361419 17760870 ~ 17763808 (-)
LOC120547356 NA coding upstream 362505 17761956 ~ 17762038 (-)
G185039 map7,LOC107374525 non-coding downstream 33568 17362009 ~ 17362903 (-)
G185031 ppp1r14c non-coding downstream 63498 17312485 ~ 17332973 (-)
G184989 NA non-coding downstream 226209 17169689 ~ 17170262 (-)
LOC120547043 NA non-coding downstream 460290 16933693 ~ 16936181 (-)
G184903 NA non-coding downstream 571874 16824296 ~ 16824597 (-)
G185035 NA non-coding upstream 26753 17426204 ~ 17432964 (-)
LOC120546280 NA non-coding upstream 119320 17518771 ~ 17521010 (-)
G185094 NA non-coding upstream 126067 17525518 ~ 17527365 (-)
G185123 sgk1 non-coding upstream 166218 17565669 ~ 17578288 (-)
G185124 NA non-coding upstream 186800 17586251 ~ 17586492 (-)
LOC120547341 NA other downstream 126837 17266359 ~ 17269634 (-)
gpatch2 gpatch2,LOC102785715 other downstream 560488 16825652 ~ 16835983 (-)
snap91b LOC101475403,LOC107094487,LOC107378032,LOC106520033,LOC108247682 other downstream 878597 16490650 ~ 16517874 (-)
LOC120546332 akap7 other downstream 1208141 16146590 ~ 16188330 (-)
LOC120546224 NA other downstream 1328162 16065854 ~ 16068309 (-)
tbpl1 tbpl1 other upstream 223673 17623124 ~ 17631351 (-)
zgc:153284 NA other upstream 365354 17764805 ~ 17766910 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other upstream 511819 17911270 ~ 17913036 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other upstream 1090364 18489815 ~ 18506198 (-)
LOC120546357 LOC106525279 other upstream 1240970 18640421 ~ 18647401 (-)

Expression


Co-expression Network