G185438 (LOC104951064,LOC103372631,LOC100709203)


Basic Information

Item Value
gene id G185438
gene name LOC104951064,LOC103372631,LOC100709203
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 18695681 ~ 18698228 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU251160
CTAATTTTAGACAGGATTTTAAATTAGCTGTGGAATACCACTGCTATAGTGTCTTACAGCAGAAAAAACATGTAGGCCATTTGTGTGCATATAATTCGTGCCACAGATTCAACCAGACAGATAATTGAATTTAAATATCACTCTTTTATTTACATATCTTACAAACATTTATCTTAATCctctgtgtaaaaaaataaatagaaatttCATAACTTAAACCAGTAATGTTTTCACAGAAAACTTGATACTAAGATAGACCACTCAGACCATCATGGTTAAGACAAAGCACGTCAGTTTTTAAGTTTTTCCACAATTACTCTCACATTCCATCAACCAGAAAACAAACTGGATCAATAATAACTATTGCTCTGAACACATGCACATCAACACTAACAAGTTGTGTTATCTAGCACCATAAAATCATAATAAACTCATTAAATGTCTAGGTGGTATTagttaaaacatgctttttaaaCTTGCTACATGGGTGTAATAGGCAAGTATAGATAAAAGGCAAATCAAATCATAAATATGCTTTCTGGTAAAAGTCAATTCCATAGCCCTGTGATCTGCACATCGGTCTTATACATCAAGAAAATATGCTCGATAGAAGTATTGTTTTTGGAAGTCTTTAAAGGGCCAGCAGGGTTGGGGAGCTGAGGGAATCAGAGGACTGGTCGTTGCTGTTGCTTTCTCTCCTGTGGGCGACACCACAAGTGGGGAAGGTCTCTGCCTCTGGGAAGCTAAACACAAAAGAAGACGTGTAGGTGGTGCAGGCTGGTGTGCAGGTCACCACAGGTGTGCACAGGGGCTCAAAGTCACCGTTATTGGCTAAGGCGTGAAGGGGCTCCCAGTCCTGAGTTGTGTAGAGGGAGTTGGACAGGTCAACCTCTGGCACTGACCGCGCTGTCTCCATCTCCGTCTTTGCCATCAGATCCAAGGACTCCTCGAGGACAGAGGAGTCGAGGTCTGTCATCTTGACCGTGCTGCTGGCGATGGTGGCGGTGGAGAGGACGGAGCTACTGCTGGAGAAGATGGAGTTGGAGGTTGAGGTGAAGGTTGGCTGGCTGGAAGTGATAGTGGTTGCCTTTGGGATGGTGGTCTGTGGCTGGGAGGACACCGCGTTGGAGAGGAAGGGGTGGGAAGGAGAAATGGAGGCCACAGAGAAGTCAATGTCCAGCTCTGAAGGGATTTTGCAGATGGGTTGATGGGCAGCCAGAATGAACTCAAGCCTTTCCTTCTCCTTCAGAAGATTAGTAATATCGTTCTGCAGGCTGGACTTCTCATCCTCAAGCTGATCAGTTTCAGCTTGCAGAGTGTCTGTAAGCTCTCTCCTCCTGTTGCGGCATTTTGCGGCTGCCtgcttgtttctctctctgcgaactcttttcttctcttcctcctcagaTGTCACCTGATCCATTCTGGCCCTCTTGGTAGAGTTAAGAGCCCTGGATGAGGACCTCATGCCTGGTCTGGAGTACACCGGGCTGGGGCTGGAGCTGTAGGGGGGAGCTCTGTGAGAAGGGGCCACTGAGGAGATCAAAGGCTGGACCATCCACTGCAGATCCGGGCTTGCCGAAATAGCGGTGACAGTGGGGATGAAGGAGGCACTTGATGCTGTCAGGTCGGTGAAATCCTGAGACTGGGGAGATCCCATGCTTGAGTAAGATCCCGCTGGTGACGGGTAGTATCCCAGATTGTCCCCGGACGGGGAAGCGGTGCTGCAGCGTGAGGAATCGCACTCCGTGTTGAAAGCGTTAAACATCATCTTTCCGCAGAAAACCAAGTAGAAAGATTCAAACAACTGTGAACTTGAGATGAGGAAATCCTTTTGTAGGTTTGGGAGAAACTCTTAAATTGCCGCTCCCGATATAATGTCTCTGGTCGTTGTTCTGCTA

Function

NR:

description
PREDICTED: proto-oncogene c-Fos-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251160 True 1901 lncRNA 0.47 4 18695681 18698228

Neighbor

gene id symbol gene type direction distance location
LOC120546603 LOC104951063,LOC103372632 coding downstream 4725 18687807 ~ 18690956 (-)
LOC120546605 LOC103372633,LOC101488065,LOC104964430 coding downstream 15147 18668961 ~ 18680534 (-)
LOC120546602 NA coding downstream 27962 18658909 ~ 18667719 (-)
ptk2bb ptk2b coding downstream 381214 18293837 ~ 18314467 (-)
baalcb LOC103363522,LOC102076438,LOC102297435,LOC101471426 coding downstream 491736 18198485 ~ 18203945 (-)
LOC120546718 daam1 coding upstream 120853 18819081 ~ 18869609 (-)
LOC120546626 ppp1r13b coding upstream 175506 18873734 ~ 18898311 (-)
LOC120546204 NA coding upstream 210429 18908657 ~ 18913081 (-)
LOC120547084 LOC103364980,LOC104947346 coding upstream 216639 18914867 ~ 18932089 (-)
LOC120546312 NA coding upstream 259233 18957461 ~ 18962093 (-)
G185467 NA non-coding downstream 885 18694554 ~ 18694796 (-)
G185454 NA non-coding downstream 59019 18636384 ~ 18636662 (-)
G185376 NA non-coding downstream 298511 18396888 ~ 18397170 (-)
G185368 NA non-coding downstream 376970 18318396 ~ 18318711 (-)
LOC120546287 NA non-coding downstream 509094 18183960 ~ 18186587 (-)
G185479 NA non-coding upstream 28644 18726872 ~ 18732810 (-)
G185556 NA non-coding upstream 215585 18913813 ~ 18914471 (-)
G185565 NA non-coding upstream 230097 18928325 ~ 18977441 (-)
G185619 rps6kc1 non-coding upstream 411281 19109509 ~ 19110183 (-)
LOC120546625 NA non-coding upstream 492008 19190236 ~ 19203995 (-)
LOC120546357 LOC106525279 other downstream 48280 18640421 ~ 18647401 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other downstream 189483 18489815 ~ 18506198 (-)
G185233 LOC103372532,LOC104962272,LOC100693291 other downstream 782645 17911270 ~ 17913036 (-)
zgc:153284 NA other downstream 928771 17764805 ~ 17766910 (-)
tbpl1 tbpl1 other downstream 1064330 17623124 ~ 17631351 (-)
abcd4 abcd4 other upstream 79902 18778130 ~ 18790373 (-)
LOC120546223 LOC102213764,LOC101481591 other upstream 206309 18904537 ~ 18907254 (-)
LOC120546238 efr3b,LOC101073163 other upstream 635827 19334055 ~ 19354316 (-)
LOC120546212 fam150b,LOC104941953,LOC100704438 other upstream 950299 19648527 ~ 19652927 (-)
ccdc167 ccdc167 other upstream 1148730 19846958 ~ 19849804 (-)

Expression


Co-expression Network