G185656


Basic Information

Item Value
gene id G185656
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 19278107 ~ 19279357 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU251440
cacatatattttataaagtAAGAGCAAAAATGTTACCCGTTCGTCGGTAGCAGCCTTGGCACCTTCTTCCGCAGGACTCACAGGGACAGGCATTCGGGCCACGTAGAGGCCGTTGAGGGCAGCCATCATCAGCGGCCTCTTCATGGAGTCGACGGACATCTTCTGTCTTTCCAGCGTCTTCAAGAGAGAGGAAAATCCTGGTGTCATGGTTACAGGTAGCGGCAGCATTGCGAGACTGACTGACCTGCGCTAACCTCAAATCGGTAAGCGCGCACATGTGCGTGTAGAAGTGGGTGGGGACGATttgacacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgt

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU251440 True 377 lncRNA 0.53 2 19278107 19279357

Neighbor

gene id symbol gene type direction distance location
smyd2b smyd2,LOC103360985 coding upstream 8709 19260262 ~ 19269398 (+)
rps6kc1 rps6kc1 coding upstream 151448 19102583 ~ 19126659 (+)
moxd1l NA coding upstream 175687 19097059 ~ 19102420 (+)
si:ch211-203k16.3 LOC102290548,LOC102780528,LOC100708179,LOC101478729,LOC102192128,LOC103369909 coding upstream 201625 19070669 ~ 19076482 (+)
prkg3 LOC104947339,LOC103364985,LOC100708987,LOC101479945 coding upstream 275077 18990946 ~ 19003030 (+)
LOC120546239 NA coding downstream 48650 19328007 ~ 19333616 (+)
parp1 parp1,LOC102777090 coding downstream 111648 19391005 ~ 19403199 (+)
lin9 lin9 coding downstream 124499 19403856 ~ 19412698 (+)
si:ch211-225h24.2 tdrp coding downstream 305345 19584702 ~ 19598107 (+)
LOC120546417 NA coding downstream 420365 19699722 ~ 19703391 (+)
G185599 snx9,LOC106928315,LOC103138599,LOC106957401 non-coding upstream 194323 19082696 ~ 19083784 (+)
G185593 NA non-coding upstream 232000 19045414 ~ 19046107 (+)
G185592 kcnk2 non-coding upstream 234559 19043224 ~ 19043548 (+)
G185591 kcnk2 non-coding upstream 253529 19024264 ~ 19024578 (+)
G185590 NA non-coding upstream 255077 19022696 ~ 19023030 (+)
G185696 NA non-coding downstream 273917 19553274 ~ 19554235 (+)
G185711 NA non-coding downstream 372880 19652237 ~ 19652575 (+)
G185716 tmem18 non-coding downstream 412779 19692136 ~ 19693056 (+)
G185793 NA non-coding downstream 428974 19708331 ~ 19708930 (+)
G185794 NA non-coding downstream 429857 19709214 ~ 19709512 (+)
LOC120546624 prox1 other upstream 41074 19204154 ~ 19237033 (+)
LOC120547227 LOC104932566,LOC103364615 other upstream 566113 18705856 ~ 18711994 (+)
ylpm1 ylpm1 other upstream 643055 18598365 ~ 18635052 (+)
znf513a znf513,LOC102795572 other upstream 1137847 18127131 ~ 18140260 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other upstream 1223181 18020956 ~ 18054926 (+)
acbd3 acbd3,LOC102799892 other downstream 75259 19354616 ~ 19427489 (+)
si:dkey-206f10.1 LOC103360989,LOC103380838 other downstream 88363 19367720 ~ 19389223 (+)
nhsl1b nhsl1,LOC101470763 other downstream 150238 19429595 ~ 19541832 (+)
zgc:193593 NA other downstream 293216 19572573 ~ 19620783 (+)
acp1 acp1 other downstream 354143 19633500 ~ 19648156 (+)

Expression


Co-expression Network