acbd3 (acbd3,LOC102799892)


Basic Information

Item Value
gene id acbd3
gene name acbd3,LOC102799892
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 19354616 ~ 19427489 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU251470
tttttttttttttttttttttttttttttttttttaaatggagtctacTGGGCTGGCAAACAATATGAAGAACTGGCAAGTCATTCCATGGTTTAGAGTGAACTCGAAATAGTCATGAATGCTAAAGGAGTAAGTATAACATAACACGCACGTGAAAAAGTAGGCCCTCTGGCTTTATAAACTCAAGCATCTCTGTGTGATACACAGCAAGAAGTTTAAAAACATtactaaataaatatttgttctcCCTTTCTCGAACAAATATTTTATTGATGTGTCTATTTCCACATGACTGATTACATTAAATCATCCACTGTCCTTTGCTTATCAATTCTTCATGATagaatcaagaaaaaaaaggagctgGTATTACGACAGATGTTATATTAATATTACCTGGGGTGTGTTTATCATTCTGTGTGTTTGGAGATGCTGTACTCACTTTTGACATACACAATATAAATTCCATGTTTTGGAGGTCATAACACACTGTTACATCTCTGCAGCACTCAGAAATcaaaaaacattacacaaaatacagtgttgctgttgtttttcttccaGGTATGAATTAAATCAAATTGTCATCTCAAATAAGGTGTCGTGAATAAACTGAgatgatttatttttgtgtctttgGTGATGTGGTTGCTTACTAACTCAGTTGTGACATCTAAGTTTATTAAATTTAAGTTCATTTGTTTCCATACTTTAGATTTATTATGTCTAGTTTAACATTACATATGCATGCTTTGTGTACCTACCACATAGGTGCATTATAAGCAGCGTGTGCAATGTGTTCAGTAAGCTTCAGAGACATTTGGTTTCACTATCACTTGTTGATCTGtatttgtacatttttgtgtgtgtatgcaacCAAACTTTAAAGACACAGGCAGAATAACTTGCAAGTTGAGTAATATGCCCAATGTCCTTGCTGATGGTTAGTTTATCATATTATTTAATAAGAGGCCACTCCTGCCTTCTATCCATACAGTGATTTGTGTAACAAAATGTCACTATGGCTTAACCAAGCCATGAAGTTTAAGAAAGTTCCCGTATGTTCTGATGTGTGATGTCTTAAGTTTCTTATTGCTCACCAAATGGTTTGAGTTGACTTGTTTAAGCCTTGTGTGTAAATAATTCTATAAATGAGTTTATGTATGGGTTTTTAAATGTGGAAGAAGGCTATGGTTTTGAGAATCAATGCACTGTAAAATATGGTGAATGAGATATGTATACACTTTACCCccaatgatccaaaacaaatTGTAGGAAGTATACAACTGTAAGACTCTATTGACATGACAGACAGAAAAGCTCatctttttgtattgttttgacTTGTTTGGATCTCTTATGAGTTGCAAGATCTTTTTTTGGGCATATATTTAATCCT
>XM_039781584.1
GTCTAAACGGAAGTAGGTACGTGGCCGCTTCAGCTGACAGTGTACATGATGGCGACAGAGGTTCAGAGCGGCGACCTCGACAGTGCTACTTCCAGCCGGCTCGAAGTTTCTATCGATGGCCTCACCCTCAGTCCTGACCCGGAGGGCGAGCAGATCCACGTCGAAGATCCTGACCCTAAACCCGCGGAACCCGAGACCGATACGCCGGGTGTCGCGGGAGGCGaagatggagagacagacaaatCTGCGATAGAGAGAAAATGGGGCTTTCCTTTGCTGGAGCTGTACGGAATGGGCCTTAAATTTTTCAAAGATAAAGATGGAAAGGCCTTCCACCCAACGTATGAGGAGAAGCTCCGACTGGTGGCTCTGCACAAACAGGTGTTACTGGGCCCTTATAATCCTGATGCTTCACCAGAGGTCGGCTTCTTTGATGTCCTCGGCAATGACCGCAGAAAAGAGTGGGCCTCCCTGGGTAACCTGGAGAAGGAGGAGGCCATGGTGGAGTTTGTCAAGCTGCTGAACAAGTGCTGTAACCTCTTCGCTCCCTACGTCACCTCACACAAGATCGAAagggaggagcaggagaggaaaaggaaagaagaagaggagcgACAGcgactggaggaggaggagagggagcgacaaaggcaggaggaggagagacgaAGGcttgaggaggaggaaaggctgaggagagaggaagaggaaaggagaCAGGCAGAGGAGGAAAGGCTACGGATTGAGCAGCAGAAACAACAGATAATGGCGGCATTGAATGCGCAGACAGCAGTGCAGTTCCAACAGTATGCTGCTCAGCAGTACCCCAACAGCCCCGAGCAACAGCTGGGCCTCATCCGTCAGCTCCAGGAGCAGCACTACCAGCAGTACATGCAGCAGCTCTACCAGGTCCAGCTGGCACAGCAACAGGCGGCCTTACAGAAGCAGGCTGATTCGATGGTGCAGGGTACCCTTGAATCTAGCGGCTTCAATAGTGGCGAACCCATCCCTGCCCCAGCAGCAGGACCGTTGTGTGCAGCTTTACCACCTGCTGGCGAGGAAACCCCTACAGTCAACGGAGGCCAGTCGGACTCGTACTCGGAGAGCATGGACCGGGAGCCAGAGCCTGAGCCGGCAGAGGAGGTCTCAGAGAACGGGCCTTTATTAGCAGACTCTCCACCAGTCATAGCTGCTCCCTCCATGTGGACACGGCCACAGATCAAGGACTTCAAGGAGAAAATCCGGCAGGACGCAGATAGTGTGATCACAGTGGGGCGTGGCGAGGTGGTGACAGTGCGTGTGCCCACCCACGAGGAGGGCTCTTACCTGTTCTGGGAGTTTGCCACGGACTATTATGACATCGGCTTCGGGGTCTTCTTCGAATGGACGGACGCTGCCTCTGCTTCGGTCAGCGTGCACGTGTCTGAGTCCAGTGATGAggacgaggaagaggaagGTGATCCTCCCAGTGAGGAGGAGAAGGCGAAGAAGGAGGCAGGGAAGCCTCAGGTGGATGAGATTGTGCCGGTGTACCGGCGGGACTGTCATGAGGAGGTGTACGCCGGCAGCCACCAGTACCCCGGCCGCGGCGTCTACCTGCTCAAGTTTGACAACTCCTATTCACTCTGGCGCTCCAAGAGTGTTTATTACAGAGTCTACTACACCAGATAAGCCTGAATACAGACACAGGGGAGCCAAGGAGTGTATgttcctatgtgtgtgtgtaggtggagaTTTGTGCgattgcagcctgtgtgtgtgaaagagataGTGATACCAGATCTGGACAAAACCACCAGAGGgtgacaaagagacacatctgGAGCCCTAGTTTGGAGATTGGactaatatgtatgtatgtatgtatgtatgtatgtatgtactgtatgtgtatgcgtGTCCCAAGATACACCCATGCTTGAGCCTGTCATCGAGCCCCTGGAAGAGGAGTGTGTATTCCTGTTGTATATTCACCACCTGTCCTCGCTGTGCTCCCATAGACCAAGCTGTAGGACTTTGCTCTCATATTGTATTTGACCACTTTTCACCCCGGGCTCCTCTTCTGTAACCACCCCAGCCCAACGCTGTCCAACGTGGCCTTGTGGCTGCTTCTGCCCTGAGTGACGCTTTCATAACCATAACCGGAAACCCGGCAAGTCCAGCACTCTGTGAGCCAACGTTTCCTGTTTGGTGGTAACAGTAGTTGTTAATCCCACAAGAACACAGACAATGTTGAAAATCTAATTATATTGCAAATGTACTTCATAACACTATGCCTCTGTTCCACAAAGAGCTTCTAGTCTTTGCcaagtctctcacacacattaaaaacaccATTGTACCAttaatcatctttttttttttttttttttttgttaaacagCAGTCTGTTATTCTCTTCCCCAGCCACCATGTACATATGAAGATCTGAGAGGATGTTTGGTGAAAGCAGTGCTCTTTTTTTGGCTTATTTCCCACACAAAACCAGCCTGACTTTCACCTTTATTTCTTTATACAAATCTGATTGACACAGTGCACCATgagtagtttttcttttttttttattttcttttttttttaaatggagtctacTGGGCTGGCAAACAATATGAAGAACTGGCAAGTCATTCCATGGTTTAGAGTGAACTCGAAATAGTCATGAATGCTAAAGGAGTAAGTATAACATAACACGCACGTGAAAAAGTAGGCCCTCTGGCTTTATAAACTCAAGCATCTCTGTGTGATACACAGCAAGAAGTTTAAAAACATtactaaataaatatttgttctcCCTTTCTCGAACAAATATTTTATTGATGTGTCTATTTCCACATGACTGATTACATTAAATCATCCACTGTCCTTTGCTTATCAATTCTTCATGATagaatcaagaaaaaaaaggagctgGTATTACGACAGATGTTATATTAATATTACCTGGGGTGTGTTTATCATTCTGTGTGTTTGGAGATGCTGTACTCACTTTTGACATACACAATATAAATTCCATGTTTTGGAGGTCATAACACACTGTTACATCTCTGCAGCACTCAGAAATcaaaaaacattacacaaaatacagtgttgctgttgtttttcttccaGGTATGAATTAAATCAAATTGTCATCTCAAATAAGGTGTCGTGAATAAACTGAgatgatttatttttgtgtctttgGTGATGTGGTTGCTTACTAACTCAGTTGTGACATCTAAGTTTATTAAATTTAAGTTCATTTGTTTCCATACTTTAGATTTATTATGTCTAGTTTAACATTACATATGCATGCTTTGTGTACCTACCACATAGGTGCATTATAAGCAGCGTGTGCAATGTGTTCAGTAAGCTTCAGAGACATTTGGTTTCACTATCACTTGTTGATCTGtatttgtacatttttgtgtgtgtatgcaacCAAACTTTAAAGACACAGGCAGAATAACTTGCAAGTTGAGTAATATGCCCAATGTCCTTGCTGATGGTTAGTTTATCATATTATTTAATAAGAGGCCACTCCTGCCTTCTATCCATACAGTGATTTGTGTAACAAAATGTCACTATGGCTTAACCAAGCCATGAAGTTTAAGAAAGTTCCCGTATGTTCTGATGTGTGATGTCTTAAGTTTCTTATTGCTCACCAAATGGTTTGAGTTGACTTGTTTAAGCCTTGTGTGTAAATAATTCTATAAATGAGTTTATGTATGGGTTTTTAAATGTGGAAGAAGGCTATGGTTTTGAGAATCAATGCACTGTAAAATATGGTGAATGAGATATGTATACACTTTACCCccaatgatccaaaacaaatTGTAGGAAGTATACAACTGTAAGACTCTATTGACATGACAGACAGAAAAGCTCatctttttgtattgttttgacTTGTTTGGATCTCTTATGAGTTGCAAGATCTTTTTTTGGGCATATATTTAATCCTGATTAAACTTATGTTCCTCTCTAGAA
>XM_039781585.1
AGTCTAAACGGAAGTAGGTACGTGGCCGCTTCAGCTGACAGTGTACATGATGGCGACAGAGGTTCAGAGCGGCGACCTCGACAGTGCTACTTCCAGCCGGCTCGAAGTTTCTATCGATGGCCTCACCCTCAGTCCTGACCCGGAGGGCGAGCAGATCCACGTCGAAGATCCTGACCCTAAACCCGCGGAACCCGAGACCGATACGCCGGGTGTCGCGGGAGGCGaagatggagagacagacaaatCTGCGATAGAGAGAAAATGGGGCTTTCCTTTGCTGGAGCTGTACGGAATGGGCCTTAAATTTTTCAAAGATAAAGATGGAAAGGCCTTCCACCCAACGTATGAGGAGAAGCTCCGACTGGTGGCTCTGCACAAACAGGTGTTACTGGGCCCTTATAATCCTGATGCTTCACCAGAGGTCGGCTTCTTTGATGTCCTCGGCAATGACCGCAGAAAAGAGTGGGCCTCCCTGGGTAACCTGGAGAAGGAGGAGGCCATGGTGGAGTTTGTCAAGCTGCTGAACAAGTGCTGTAACCTCTTCGCTCCCTACGTCACCTCACACAAGATCGAAagggaggagcaggagaggaaaaggaaagaagaagaggagcgACAGcgactggaggaggaggagagggagcgacaaaggcaggaggaggagagacgaAGGcttgaggaggaggaaaggctgaggagagaggaagaggaaaggagaCAGGCAGAGGAGGAAAGGCTACGGATTGAGCAGCAGAAACAACAGATAATGGCGGCATTGAATGCGCAGACAGCAGTGCAGTTCCAACAGTATGCTGCTCAGCAGTACCCCAACAGCCCCGAGCAACAGCTGGGCCTCATCCGTCAGCTCCAGGAGCAGCACTACCAGCAGTACATGCAGCAGCTCTACCAGGTCCAGCTGGCACAGCAACAGGCGGCCTTACAGAAGCAGGCTGATTCGATGGTGCAGGGTACCCTTGAATCTAGCGGCTTCAATAGTGGCGAACCCATCCCTGCCCCAGCAGCAGGACCGTTGTGTGCAGCTTTACCACCTGCTGGCGAGGAAACCCCTACAGTCAACGGAGGCCAGTCGGACTCGTACTCGGAGAGCATGGACCGGGAGCCAGAGCCTGAGCCGGCAGAGGAGGTCTCAGAGAACGGGCCTTTATTAGACTCTCCACCAGTCATAGCTGCTCCCTCCATGTGGACACGGCCACAGATCAAGGACTTCAAGGAGAAAATCCGGCAGGACGCAGATAGTGTGATCACAGTGGGGCGTGGCGAGGTGGTGACAGTGCGTGTGCCCACCCACGAGGAGGGCTCTTACCTGTTCTGGGAGTTTGCCACGGACTATTATGACATCGGCTTCGGGGTCTTCTTCGAATGGACGGACGCTGCCTCTGCTTCGGTCAGCGTGCACGTGTCTGAGTCCAGTGATGAggacgaggaagaggaagGTGATCCTCCCAGTGAGGAGGAGAAGGCGAAGAAGGAGGCAGGGAAGCCTCAGGTGGATGAGATTGTGCCGGTGTACCGGCGGGACTGTCATGAGGAGGTGTACGCCGGCAGCCACCAGTACCCCGGCCGCGGCGTCTACCTGCTCAAGTTTGACAACTCCTATTCACTCTGGCGCTCCAAGAGTGTTTATTACAGAGTCTACTACACCAGATAAGCCTGAATACAGACACAGGGGAGCCAAGGAGTGTATgttcctatgtgtgtgtgtaggtggagaTTTGTGCgattgcagcctgtgtgtgtgaaagagataGTGATACCAGATCTGGACAAAACCACCAGAGGgtgacaaagagacacatctgGAGCCCTAGTTTGGAGATTGGactaatatgtatgtatgtatgtatgtatgtatgtatgtactgtatgtgtatgcgtGTCCCAAGATACACCCATGCTTGAGCCTGTCATCGAGCCCCTGGAAGAGGAGTGTGTATTCCTGTTGTATATTCACCACCTGTCCTCGCTGTGCTCCCATAGACCAAGCTGTAGGACTTTGCTCTCATATTGTATTTGACCACTTTTCACCCCGGGCTCCTCTTCTGTAACCACCCCAGCCCAACGCTGTCCAACGTGGCCTTGTGGCTGCTTCTGCCCTGAGTGACGCTTTCATAACCATAACCGGAAACCCGGCAAGTCCAGCACTCTGTGAGCCAACGTTTCCTGTTTGGTGGTAACAGTAGTTGTTAATCCCACAAGAACACAGACAATGTTGAAAATCTAATTATATTGCAAATGTACTTCATAACACTATGCCTCTGTTCCACAAAGAGCTTCTAGTCTTTGCcaagtctctcacacacattaaaaacaccATTGTACCAttaatcatctttttttttttttttttttttgttaaacagCAGTCTGTTATTCTCTTCCCCAGCCACCATGTACATATGAAGATCTGAGAGGATGTTTGGTGAAAGCAGTGCTCTTTTTTTGGCTTATTTCCCACACAAAACCAGCCTGACTTTCACCTTTATTTCTTTATACAAATCTGATTGACACAGTGCACCATgagtagtttttcttttttttttattttcttttttttttaaatggagtctacTGGGCTGGCAAACAATATGAAGAACTGGCAAGTCATTCCATGGTTTAGAGTGAACTCGAAATAGTCATGAATGCTAAAGGAGTAAGTATAACATAACACGCACGTGAAAAAGTAGGCCCTCTGGCTTTATAAACTCAAGCATCTCTGTGTGATACACAGCAAGAAGTTTAAAAACATtactaaataaatatttgttctcCCTTTCTCGAACAAATATTTTATTGATGTGTCTATTTCCACATGACTGATTACATTAAATCATCCACTGTCCTTTGCTTATCAATTCTTCATGATagaatcaagaaaaaaaaggagctgGTATTACGACAGATGTTATATTAATATTACCTGGGGTGTGTTTATCATTCTGTGTGTTTGGAGATGCTGTACTCACTTTTGACATACACAATATAAATTCCATGTTTTGGAGGTCATAACACACTGTTACATCTCTGCAGCACTCAGAAATcaaaaaacattacacaaaatacagtgttgctgttgtttttcttccaGGTATGAATTAAATCAAATTGTCATCTCAAATAAGGTGTCGTGAATAAACTGAgatgatttatttttgtgtctttgGTGATGTGGTTGCTTACTAACTCAGTTGTGACATCTAAGTTTATTAAATTTAAGTTCATTTGTTTCCATACTTTAGATTTATTATGTCTAGTTTAACATTACATATGCATGCTTTGTGTACCTACCACATAGGTGCATTATAAGCAGCGTGTGCAATGTGTTCAGTAAGCTTCAGAGACATTTGGTTTCACTATCACTTGTTGATCTGtatttgtacatttttgtgtgtgtatgcaacCAAACTTTAAAGACACAGGCAGAATAACTTGCAAGTTGAGTAATATGCCCAATGTCCTTGCTGATGGTTAGTTTATCATATTATTTAATAAGAGGCCACTCCTGCCTTCTATCCATACAGTGATTTGTGTAACAAAATGTCACTATGGCTTAACCAAGCCATGAAGTTTAAGAAAGTTCCCGTATGTTCTGATGTGTGATGTCTTAAGTTTCTTATTGCTCACCAAATGGTTTGAGTTGACTTGTTTAAGCCTTGTGTGTAAATAATTCTATAAATGAGTTTATGTATGGGTTTTTAAATGTGGAAGAAGGCTATGGTTTTGAGAATCAATGCACTGTAAAATATGGTGAATGAGATATGTATACACTTTACCCccaatgatccaaaacaaatTGTAGGAAGTATACAACTGTAAGACTCTATTGACATGACAGACAGAAAAGCTCatctttttgtattgttttgacTTGTTTGGATCTCTTATGAGTTGCAAGATCTTTTTTTGGGCATATATTTAATCCTGATTAAACTTATGTTCCTCTCTAGAA

Function

symbol description
acbd3 Predicted to enable fatty-acyl-CoA binding activity. Predicted to be active in Golgi membrane. Orthologous to human ACBD3 (acyl-CoA binding domain containing 3).

NR:

description
Golgi resident protein GCP60-like isoform X4

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0000062 fatty-acyl-CoA binding molecular_function

KEGG:

id description
K23935 ACBD3; golgi resident protein GCP60

RNA

RNA id representative length rna type GC content exon number start site end site
TU251470 False 1399 lncRNA 0.33 2 19354616 19427463
XM_039781584.1 True 3969 mRNA 0.45 8 19417971 19427489
XM_039781585.1 False 3967 mRNA 0.45 8 19417970 19427489

Neighbor

gene id symbol gene type direction distance location
LOC120546239 NA coding upstream 21000 19328007 ~ 19333616 (+)
smyd2b smyd2,LOC103360985 coding upstream 85218 19260262 ~ 19269398 (+)
rps6kc1 rps6kc1 coding upstream 227957 19102583 ~ 19126659 (+)
moxd1l NA coding upstream 252196 19097059 ~ 19102420 (+)
si:ch211-203k16.3 LOC102290548,LOC102780528,LOC100708179,LOC101478729,LOC102192128,LOC103369909 coding upstream 278134 19070669 ~ 19076482 (+)
si:ch211-225h24.2 tdrp coding downstream 157213 19584702 ~ 19598107 (+)
LOC120546417 NA coding downstream 272233 19699722 ~ 19703391 (+)
si:dkey-119f1.1 smc6 coding downstream 285175 19712664 ~ 19731224 (+)
fig4a fig4,LOC102794534 coding downstream 317688 19745177 ~ 19830843 (+)
LOC120546286 gpr6,LOC104945012 coding downstream 406996 19834485 ~ 19837398 (+)
G185656 NA non-coding upstream 75259 19278107 ~ 19279357 (+)
G185599 snx9,LOC106928315,LOC103138599,LOC106957401 non-coding upstream 270832 19082696 ~ 19083784 (+)
G185593 NA non-coding upstream 308509 19045414 ~ 19046107 (+)
G185592 kcnk2 non-coding upstream 311068 19043224 ~ 19043548 (+)
G185591 kcnk2 non-coding upstream 330038 19024264 ~ 19024578 (+)
G185696 NA non-coding downstream 125785 19553274 ~ 19554235 (+)
G185711 NA non-coding downstream 224748 19652237 ~ 19652575 (+)
G185716 tmem18 non-coding downstream 264647 19692136 ~ 19693056 (+)
G185793 NA non-coding downstream 280842 19708331 ~ 19708930 (+)
G185794 NA non-coding downstream 281725 19709214 ~ 19709512 (+)
LOC120546624 prox1 other upstream 117583 19204154 ~ 19237033 (+)
LOC120547227 LOC104932566,LOC103364615 other upstream 642622 18705856 ~ 18711994 (+)
ylpm1 ylpm1 other upstream 719564 18598365 ~ 18635052 (+)
znf513a znf513,LOC102795572 other upstream 1214356 18127131 ~ 18140260 (+)
fndc4a fndc4,LOC107589087,LOC107723530,LOC106923250 other upstream 1299690 18020956 ~ 18054926 (+)
nhsl1b nhsl1,LOC101470763 other downstream 2106 19429595 ~ 19541832 (+)
zgc:193593 NA other downstream 145084 19572573 ~ 19620783 (+)
acp1 acp1 other downstream 206011 19633500 ~ 19648156 (+)
kif25 LOC104961976,LOC100703631 other downstream 425154 19852643 ~ 19860217 (+)
gtf2h5 gtf2h5 other downstream 1743459 21170948 ~ 21172639 (+)

Expression


Co-expression Network