LOC120546212 (fam150b,LOC104941953,LOC100704438)


Basic Information

Item Value
gene id LOC120546212
gene name fam150b,LOC104941953,LOC100704438
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 19648527 ~ 19652927 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU251618
GGTAGAGATCGTAAAACACGTGGAGGAGAGCCGGGGTCGCCACAGCGCAAAAACGGAAGCACCGTCAACATCAAGGTCGAGGACCTCTCCGGTGGAACAGAAGGATTTACACAACTTGAAAACAGACAGAGGGGATCAGACTGTCGCCGTATTCCCCAGAGATCTCAGAAAGAAGGAGAAATTCCTAAAACATATAACAGGTCCACTTTACTTCAGTCCCAAGTGCAGGAAGCATGTGTACAGACTCTACCACCACACCAGAGACTGCACTATACCTGCATATTTCAAAAGATGTGCGCGGCTTCTCACCAGACTAGCCGGCAGCCCGCAGTGCACAGAGGGGTAGCACACACAAGGTTGAAACCAAGCACAAGTTTTACACGAGAAAACAACTTGGGAAAAAGGACAGTAAGAGGGAAGCCTAAAATACTCTGACCAGCCCCAACTGACATTAGGCACAGTATTGCCCTTCAGTGAGGCCTGCTCGGCTAAGGCATGGATTACTGCATCCCACCGCTCTGGCTCGATGGTTGGCTGTCACCACGAGGAAGGCAACCAGCCAACAAAACCAGACCAAGATAAAGATAGTGAAGCTGAAAAgtggagaaagaaaaagtggCTGAGAGAAACAAACATGAGGCAAATTTTCCTGCTGGCATCCataaagatgagaaaaaaaagggatatatttgaatatatatttgaattctGTTTATTTCCTCTAAGAAAAGGGCAAAATCCAAATGTACTATTTTTCGTAGGACTTGATTTCTACGATTGGTTTGCTCTGTACGAGTGCTGTGGGTTGAGCGCATCCTTTCTACTGCACAGCAGCTCTCACAGACCCCTGGCATCAGTCACGGCATAGTTTCACCCACTTGTGCTCACACTGAGAAAGAACTGtgattaaattattaattacatGAACATTTTCCTGCGTCTTTGCAAGACATGTTAAAAAAGGAAGTGGCGGTTGTAAGTCACAGCCCTCCTGTGGATCTTGGTAGAGCATGGTAAagtctatatttatatattatttgagTTGTCACAAGGTTCCACTGTACAGACTATAGGCCATATGAAACAAGAGAAATAtgatgtacatactgtaaagcAAAGCAAGAGGAATCCATCTATCTACCATAAATTAAAGTGACT
>XM_039780991.1
TCTGTAGGCTAAAACTCAACTACGCTGTGTGTATTCGGTTGTTTTAACCAGAAACTGCAGTGCAATAACTTTTAAAACCCGTGCGTAATTCATTTTCAAAGAATGATCCTTAAACGGTGCGTAGCCTAATTGGGTTTCAATTCCCATGATGGATGTAAAGTGCGCAATGGCTCTAAATGAAGTTATGAGAATCTGAAGGATATGGGTGCGTTTCCACTAAGATGCCAGTATTTGCACAGTGTGCTGTGCTGATTTGACATTTCATTGGAAATGTTAATGTAGAAAACGCTTCCTGTAACTGCGTATCGCACAGATAAATGGAGTAacggaaagggggggggggagacttACACGGCGTTCAAGCGATGGTCAGTCAACTCAAGTGGACTTTCCGCTTCAGGAGTGCCAATACAGTCTTATTATTATCACAGGCACAGCGGAGTAACCCACAAGGGACAGGTCACCGCGTCTGCGAGACAGAATAAAATCGGCCAGTGTTCAGAGGATGACAACAGATGTTCAGCGAATACTCATATGACTTCAGAAGCTTTGATTTAGAGGACCAGGCTATACGGGAACATATTTCGGACTGGGCACAAGCAGGAACCTAAAGTTGCGCACAGTTCTTTCCATTTACATGCTTATTGAACGCACGCAAAagGTCTCCGGTTCAACTTTATTCCACAAAAGCGTTGGAGAAGGAGttcactttttctctctctccacgggAGCTATGAGCGGACTGCGTAAGCACGTCACTATGCGACTGGTGCTACTGATATGCACGCTGACCGGCCACTGCAGCGTGAGCGCGCCGTCGGCGGCCCCGGCGCCTGCTGCAGCCGGCCGGGGCGCGCAGCGGGACTTGATGCGGATGGTAGAGATCGTAAAACACGTGGAGGAGAGCCGGGGTCGCCACAGCGCAAAAACGGAAGCACCGTCAACATCAAGGTCGAGGACCTCTCCGGTGGAACAGAAGGATTTACACAACTTGAAAACAGACAGAGGGGATCAGACTGTCGCCGTATTCCCCAGAGATCTCAGAAAGAAGGAGAAATTCCTAAAACATATAACAGGTCCACTTTACTTCAGTCCCAAGTGCAGGAAGCATGTGTACAGACTCTACCACCACACCAGAGACTGCACTATACCTGCATATTTCAAAAGATGTGCGCGGCTTCTCACCAGACTAGCCGGCAGCCCGCAGTGCACAGAGGGGTAGCACACACAAGGTTGAAACCAAGCACAAGTTTTACACGAGAAAACAACTTGGGAAAAAGGACAGTAAGAGGGAAGCCTAAAATACTCTGACCAGCCCCAACTGACATTAGGCACAGTATTGCCCTTCAGTGAGGCCTGCTCGGCTAAGGCATGGATTACTGCATCCCACCGCTCTGGCTCGATGGTTGGCTGTCACCACGAGGAAGGCAACCAGCCAACAAAACCAGACCAAGATAAAGATAGTGAAGCTGAAAAgtggagaaagaaaaagtggCTGAGAGAAACAAACATGAGGCAAATTTTCCTGCTGGCATCCataaagatgagaaaaaaaagggatatatttgaatatatatttgaattctGTTTATTTCCTCTAAGAAAAGGGCAAAATCCAAATGTACTATTTTTCGTAGGACTTGATTTCTACGATTGGTTTGCTCTGTACGAGTGCTGTGGGTTGAGCGCATCCTTTCTACTGCACAGCAGCTCTCACAGACCCCTGGCATCAGTCACGGCATAGTTTCACCCACTTGTGCTCACACTGAGAAAGAACTGtgattaaattattaattacatGAACATTTTCCTGCGTCTTTGCAAGACATGTTAAAAAAGGAAGTGGCGGTTGTAAGTCACAGCCCTCCTGTGGATCTTGGTAGAGCATGGTAAagtctatatttatatattatttgagTTGTCACAAGGTTCCACTGTACAGACTATAGGCCATATGAAACAAGAGAAATAtgatgtacatactgtaaagcAAAGCAAGAGGAATCCATCTATCTACCATAAATTAAAGTGACTGGCATTTAAATGGTCATTAAATGGCtgttaaatacaaatatatctaaaaatgaaatatatttaaataaattataagaTTGG

Function

NR:

description
PREDICTED: protein FAM150B-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU251618 False 1158 lncRNA 0.44 5 19648608 19651312
XM_039780991.1 True 2115 mRNA 0.45 7 19648527 19652927

Neighbor

gene id symbol gene type direction distance location
fam110c NA coding downstream 27749 19616980 ~ 19620778 (-)
fbxo25 NA coding downstream 33371 19598338 ~ 19615156 (-)
cmtr1 cmtr1 coding downstream 82330 19552948 ~ 19566197 (-)
hebp2 LOC102300854,LOC102199375,LOC101470463,LOC102798748 coding downstream 95825 19544775 ~ 19552702 (-)
mixl1 mixl1 coding downstream 233817 19412768 ~ 19414710 (-)
tmem18 tmem18 coding upstream 34541 19687468 ~ 19693031 (-)
LOC120547106 NA coding upstream 40929 19693856 ~ 19698105 (-)
ak9 NA coding upstream 79282 19732209 ~ 19745970 (-)
wasf1 wasf1 coding upstream 210822 19863749 ~ 19918978 (-)
mettl24 mettl24 coding upstream 291165 19944092 ~ 19975622 (-)
G185779 acp1 non-coding downstream 10872 19633498 ~ 19637655 (-)
LOC120546771 NA non-coding downstream 63561 19581805 ~ 19584966 (-)
G185771 NA non-coding downstream 74077 19572666 ~ 19574450 (-)
G185741 NA non-coding downstream 214425 19411720 ~ 19434102 (-)
G185721 NA non-coding downstream 279759 19367938 ~ 19368768 (-)
G185816 NA non-coding upstream 73762 19726689 ~ 19727323 (-)
G185862 gpr6,LOC104945012,LOC102794251,LOC101062337,LOC101067178 non-coding upstream 183579 19836506 ~ 19837218 (-)
G185891 cdc40 non-coding upstream 268329 19921256 ~ 19923457 (-)
G185901 NA non-coding upstream 329821 19982748 ~ 19983141 (-)
LOC120546243 NA non-coding upstream 595733 20248660 ~ 20373750 (-)
LOC120546238 efr3b,LOC101073163 other downstream 294211 19334055 ~ 19354316 (-)
LOC120546223 LOC102213764,LOC101481591 other downstream 741273 18904537 ~ 18907254 (-)
abcd4 abcd4 other downstream 858154 18778130 ~ 18790373 (-)
LOC120546357 LOC106525279 other downstream 1001126 18640421 ~ 18647401 (-)
LOC120546829 LOC104964434,LOC104922426,LOC103363570,LOC107377518 other downstream 1142329 18489815 ~ 18506198 (-)
ccdc167 ccdc167 other upstream 194031 19846958 ~ 19849804 (-)
G186006 NA other upstream 909510 20562437 ~ 20567479 (-)
syne1a syne1,LOC102291171,LOC103355013,LOC102194633 other upstream 1359465 21012392 ~ 21154812 (-)
LOC120547346 NA other upstream 1519914 21172841 ~ 21173006 (-)
LOC120547366 NA other upstream 1522411 21175338 ~ 21175528 (-)

Expression


Co-expression Network