erh (erh,LOC100699790,LOC101174968)


Basic Information

Item Value
gene id erh
gene name erh,LOC100699790,LOC101174968
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 21944743 ~ 21947000 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU252459
TTACTCTACAACCGGAAAAAACGTATTTCATTTCCTCTGAAATCTTTTccaacagctagctaacgctataTCGCACAGGGAATTAAGAAGCAATAAACAACGACTTTTTGCAGTTTTGCATCCTCCGTAAATAGACAGGGTCTACAGTCAGCACAAAAATGTCTCACACAATTTTGCTTGTCCAACCAACCAAGAGACCAGAGGGCCGCACATATGCTGACTATGAGTCAGTGAATGAATGTATGGAAGGTGTTTGCAAAATGTATGAAGAGCATCTCAAGAGGATGAATCCAAACAGTCCCTCCATCACTTATGACATTAGTCAGTTGTTTGACTTTATTGACGACTTGGCAGATCTGAGCTGTCTTGTGTACAGAGCTGACACTCAAACATACCAACCATACAACAAAGACTGGATCAAGGAAAAGATATATGTCCTGCTGCGGCGTCAGGCTCAGCAGGCAGCAAAGTAAAAGCATCAGTGAGGAGTTGTCCTGCTAAACACACTTGGAAGGAGTTTATGCTGCACTATATTTCTTGAAGATCTGTGTATAAGGACAACATTGTCAGACTGACAAGGGAAGGGTTTACATATACTATACATTGGGAAAGGAAGGGGCTGTCACACTGGGGAAACATCAGAAATGTGGgcctttttatataaaaaatggaGTCATGCTCGGCAGCATATGTATATCTGTAATTTGTTATACTAAGTTCAGAGTGCTGCAAGGACTAACTTATTGATGGAGAGGGATCTgggttttgagaaaaaaaattttgGTCAAAATTTTAGTAGTGTGTTTTTGGTTTCCCTAAAAGTTCTGACACTTTTTATATTCATGTACTGGGCAGTTGGATTTGAACATGCTGTGTATTTCGAATGCAGGTGATTTTGTTTGACATACATGTCTGCAGACTGACTAATCCATTAATGTAACTGATCCCAGAACATTTATTTTCCATATTTCATCTATTATTGTTACTTTATCCTACCATCATGATgtaaaatgctgtttttgttaACATTTTGTGTAGCATCTGATTTCAACTATCCCTGTTTCTGTTTTCTCTGATATGAACAAAATAAACTATTGTTTTCTGAATGGTCTCCACTCTTGAATATAC
>XM_039780897.1
CTACAACCGGAAAAAACGTATTTCATTTCCTCTGAAATCTTTTccaacagctagctaacgctataTCGCACAGGGAATTAAGAAGCAATAAACAACGACTTTTTGCAGTTTTGCATCCTCCGTAAATAGACAGGGTCTACAGTCAGCACAAAAATGTCTCACACAATTTTGCTTGTCCAACCAACCAAGAGACCAGAGGGCCGCACATATGCTGACTATGAGTCAGTGAATGAATGTATGGAAGGTGTTTGCAAAATGTATGAAGAGCATCTCAAGAGGATGAATCCAAACAGTCCCTCCATCACTTATGACATTAGTCAGTTGTTTGACTTTATTGACGACTTGGCAGATCTGAGCTGTCTTGTGTACAGAGCTGACACTCAAACATACCAACCATACAACAAAGACTGGATCAAGGAAAAGATATATGTCCTGCTGCGGCGTCAGGCTCAGCAGGCAGCAAAGTAAAAGCATCAGTGAGGAGTTGTCCTGCTAAACACACTTGGAAGGAGTTTATGCTGCACTATATTTCTTGAAGATCTGTGTATAAGGACAACATTGTCAGACTGACAAGGGAAGGGTTTACATATACTATACATTGGGAAAGGAAGGGGCTGTCACACTGGGGAAACATCAGAAATGTGGgcctttttatataaaaaatggaGTCATGCTCGGCAGCATATGTATATCTGTAATTTGTTATACTAAGTTCAGAGTGCTGCAAGGACTAACTTATTGATGGAGAGGGATCTgggttttgagaaaaaaaattttgGTCAAAATTTTAGTAGTGTGTTTTTGGTTTCCCTAAAAGTTCTGACACTTTTTATATTCATGTACTGGGCAGTTGGATTTGAACATGCTGTGTATTTCGAATGCAGGTGATTTTGTTTGACATACATGTCTGCAGACTGACTAATCCATTAATGTAACTGATCCCAGAACATTTATTTTCCATATTTCATCTATTATTGTTACTTTATCCTACCATCATGATgtaaaatgctgtttttgttaACATTTTGTGTAGCATCTGATTTCAACTATCCCTGTTTCTGTTTTCTCTGATATGAACAAAATAAACTATTGTTTTCTGAA

Function

symbol description
erh Predicted to be located in nucleus. Orthologous to human ERH (ERH mRNA splicing and mitosis factor).

NR:

description
PREDICTED: enhancer of rudimentary homolog

GO:

id name namespace
GO:0042742 defense response to bacterium biological_process
GO:0007049 cell cycle biological_process
GO:0006213 pyrimidine nucleoside metabolic process biological_process
GO:0030496 midbody cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252459 True 1128 TUCP 0.38 4 21944743 21947000
XM_039780897.1 False 1101 mRNA 0.38 4 21944748 21946978

Neighbor

gene id symbol gene type direction distance location
paplnb NA coding upstream 661 21938478 ~ 21944082 (+)
LOC120547078 NA coding upstream 101187 21834478 ~ 21843556 (+)
LOC120547079 NA coding upstream 135069 21806015 ~ 21809674 (+)
LOC120546759 NA coding upstream 189853 21751292 ~ 21754890 (+)
LOC120546757 NA coding upstream 217401 21723642 ~ 21727342 (+)
smek1 ppp4r3a,LOC102789800 coding downstream 299 21947299 ~ 21961671 (+)
LOC120546953 eva1a coding downstream 185841 22132841 ~ 22211477 (+)
LOC120546308 NA coding downstream 265510 22212510 ~ 22221145 (+)
LOC120546584 prep,LOC100698444,LOC102792678,LOC104927043 coding downstream 311597 22258597 ~ 22270747 (+)
LOC120546233 sim1,LOC103374615 coding downstream 491721 22438721 ~ 22450064 (+)
LOC120547080 NA non-coding upstream 110961 21832948 ~ 21833782 (+)
LOC120546760 NA non-coding upstream 198189 21745581 ~ 21746554 (+)
G186297 NA non-coding upstream 401962 21540588 ~ 21542781 (+)
G186220 NA non-coding upstream 469439 21474552 ~ 21475304 (+)
G186210 NA non-coding upstream 596162 21347944 ~ 21348581 (+)
G186452 NA non-coding downstream 347442 22294442 ~ 22294697 (+)
G186506 NA non-coding downstream 588659 22535659 ~ 22537716 (+)
G186578 rhob,LOC104947257 non-coding downstream 769970 22716970 ~ 22719893 (+)
G186622 NA non-coding downstream 852735 22799735 ~ 22800058 (+)
G186641 NA non-coding downstream 899872 22846872 ~ 22847674 (+)
gtf2h5 gtf2h5 other upstream 772104 21170948 ~ 21172639 (+)
kif25 LOC104961976,LOC100703631 other upstream 2084526 19852643 ~ 19860217 (+)
acp1 acp1 other upstream 2296587 19633500 ~ 19648156 (+)
zgc:193593 NA other upstream 2323960 19572573 ~ 19620783 (+)
nhsl1b nhsl1,LOC101470763 other upstream 2402911 19429595 ~ 19541832 (+)
G186394 mycn,LOC108233328 other downstream 38779 21985779 ~ 22065589 (+)
lin28b lin28b other downstream 333967 22280967 ~ 22301585 (+)
kcns3b kcns3,LOC103372653 other downstream 860879 22807879 ~ 22810520 (+)
si:ch211-22i13.2 NA other downstream 1015033 22962033 ~ 22966010 (+)
dtl dtl other downstream 1140820 23087820 ~ 23095505 (+)

Expression


Co-expression Network