Gene
RNA
| Item | Value |
|---|---|
| gene id | G186394 |
| gene name | mycn,LOC108233328 |
| gene type | unknown |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 21985779 ~ 22065589 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| mycn | Predicted to enable DNA binding activity; DNA-binding transcription factor activity; and protein dimerization activity. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in nucleus. Is expressed in several structures, including immature eye; nervous system; pectoral fin bud; pharyngeal arch; and pronephric duct. Human ortholog(s) of this gene implicated in Feingold syndrome. Orthologous to human MYCN (MYCN proto-oncogene, bHLH transcription factor). |
| description |
|---|
| PREDICTED: N-myc proto-oncogene protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU252499 | True | 819 | TUCP | 0.61 | 2 | 21985779 | 22065589 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| smek1 | ppp4r3a,LOC102789800 | coding | upstream | 24108 | 21947299 ~ 21961671 (+) |
| paplnb | NA | coding | upstream | 41697 | 21938478 ~ 21944082 (+) |
| LOC120547078 | NA | coding | upstream | 142223 | 21834478 ~ 21843556 (+) |
| LOC120547079 | NA | coding | upstream | 176105 | 21806015 ~ 21809674 (+) |
| LOC120546759 | NA | coding | upstream | 230889 | 21751292 ~ 21754890 (+) |
| LOC120546953 | eva1a | coding | downstream | 67252 | 22132841 ~ 22211477 (+) |
| LOC120546308 | NA | coding | downstream | 146921 | 22212510 ~ 22221145 (+) |
| LOC120546584 | prep,LOC100698444,LOC102792678,LOC104927043 | coding | downstream | 193008 | 22258597 ~ 22270747 (+) |
| LOC120546233 | sim1,LOC103374615 | coding | downstream | 373132 | 22438721 ~ 22450064 (+) |
| LOC120546368 | mrap2 | coding | downstream | 416331 | 22481920 ~ 22484901 (+) |
| LOC120547080 | NA | non-coding | upstream | 151997 | 21832948 ~ 21833782 (+) |
| LOC120546760 | NA | non-coding | upstream | 239225 | 21745581 ~ 21746554 (+) |
| G186297 | NA | non-coding | upstream | 442998 | 21540588 ~ 21542781 (+) |
| G186220 | NA | non-coding | upstream | 510475 | 21474552 ~ 21475304 (+) |
| G186210 | NA | non-coding | upstream | 637198 | 21347944 ~ 21348581 (+) |
| G186452 | NA | non-coding | downstream | 228853 | 22294442 ~ 22294697 (+) |
| G186506 | NA | non-coding | downstream | 470070 | 22535659 ~ 22537716 (+) |
| G186578 | rhob,LOC104947257 | non-coding | downstream | 651381 | 22716970 ~ 22719893 (+) |
| G186622 | NA | non-coding | downstream | 734146 | 22799735 ~ 22800058 (+) |
| G186641 | NA | non-coding | downstream | 781283 | 22846872 ~ 22847674 (+) |
| erh | erh,LOC100699790,LOC101174968 | other | upstream | 38779 | 21944743 ~ 21947000 (+) |
| gtf2h5 | gtf2h5 | other | upstream | 813140 | 21170948 ~ 21172639 (+) |
| kif25 | LOC104961976,LOC100703631 | other | upstream | 2125562 | 19852643 ~ 19860217 (+) |
| acp1 | acp1 | other | upstream | 2337623 | 19633500 ~ 19648156 (+) |
| zgc:193593 | NA | other | upstream | 2364996 | 19572573 ~ 19620783 (+) |
| lin28b | lin28b | other | downstream | 215378 | 22280967 ~ 22301585 (+) |
| kcns3b | kcns3,LOC103372653 | other | downstream | 742290 | 22807879 ~ 22810520 (+) |
| si:ch211-22i13.2 | NA | other | downstream | 896444 | 22962033 ~ 22966010 (+) |
| dtl | dtl | other | downstream | 1022231 | 23087820 ~ 23095505 (+) |
| ppp2r5a | ppp2r5a | other | downstream | 1030323 | 23095912 ~ 23142640 (+) |
