G186452



Basic Information


Item Value
gene id G186452
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 22294442 ~ 22294697 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU252574
AAaatggagaacagtgatggagcaagtcaatggagggagAGTGAGGTGTTAGACCTAATTAGTGTATGGGGAGATATTTAAATTCAATCAAAACTAGAAGGATCATACCGTGACcgtctcctcctcagcacctgctcttATACAaacatttagaaataaaagcgaaaatgcttacttcctccataacctccctaactttagtgcaacagcgtgctgcgtctgatgtcattgttgttATTCTTTTGCTCATGTGGGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU252574 True 256 lncRNA 0.41 1 22294442 22294697

Neighbor


gene id symbol gene type direction distance location
LOC120546584 prep,LOC100698444,LOC102792678,LOC104927043 coding upstream 23695 22258597 ~ 22270747 (+)
LOC120546308 NA coding upstream 73297 22212510 ~ 22221145 (+)
LOC120546953 eva1a coding upstream 82965 22132841 ~ 22211477 (+)
smek1 ppp4r3a,LOC102789800 coding upstream 332771 21947299 ~ 21961671 (+)
paplnb NA coding upstream 350360 21938478 ~ 21944082 (+)
LOC120546233 sim1,LOC103374615 coding downstream 144024 22438721 ~ 22450064 (+)
LOC120546368 mrap2 coding downstream 187223 22481920 ~ 22484901 (+)
LOC120546366 LOC104963849 coding downstream 194349 22489046 ~ 22515691 (+)
LOC120547088 LOC104956167 coding downstream 246709 22541406 ~ 22553765 (+)
LOC120546968 LOC103362669 coding downstream 260163 22554860 ~ 22585207 (+)
LOC120547080 NA non-coding upstream 460660 21832948 ~ 21833782 (+)
LOC120546760 NA non-coding upstream 547888 21745581 ~ 21746554 (+)
G186297 NA non-coding upstream 751661 21540588 ~ 21542781 (+)
G186220 NA non-coding upstream 819138 21474552 ~ 21475304 (+)
G186210 NA non-coding upstream 945861 21347944 ~ 21348581 (+)
G186506 NA non-coding downstream 240962 22535659 ~ 22537716 (+)
G186578 rhob,LOC104947257 non-coding downstream 422273 22716970 ~ 22719893 (+)
G186622 NA non-coding downstream 505038 22799735 ~ 22800058 (+)
G186641 NA non-coding downstream 552175 22846872 ~ 22847674 (+)
G186697 NA non-coding downstream 722260 23016957 ~ 23018800 (+)
G186394 mycn,LOC108233328 other upstream 228853 21985779 ~ 22065589 (+)
erh erh,LOC100699790,LOC101174968 other upstream 347442 21944743 ~ 21947000 (+)
gtf2h5 gtf2h5 other upstream 1121803 21170948 ~ 21172639 (+)
kif25 LOC104961976,LOC100703631 other upstream 2434225 19852643 ~ 19860217 (+)
acp1 acp1 other upstream 2646286 19633500 ~ 19648156 (+)
kcns3b kcns3,LOC103372653 other downstream 513182 22807879 ~ 22810520 (+)
si:ch211-22i13.2 NA other downstream 667336 22962033 ~ 22966010 (+)
dtl dtl other downstream 793123 23087820 ~ 23095505 (+)
ppp2r5a ppp2r5a other downstream 801215 23095912 ~ 23142640 (+)
rsph3 rsph3 other downstream 897941 23192638 ~ 23196996 (+)

Expression



Co-expression Network