G186841


Basic Information

Item Value
gene id G186841
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 23438240 ~ 23439520 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU253107
agattattattttttggggcattttaggccttttatcTTTAtaagacagctgaagacatgaaaggggagaggtcGGAATCTAACCCTGGCCCgttgcgtcgaggagtaaacctctatatatgggcgcccactctaccaactgagccatccCGGCACCCGACTCTGGGAAAATGTTTAATTGGCGTTTTACACTAATTTCTGACAAACGAAGGTGATTGATTGAAAAAATAGTTAGTCAGATTAATCAACATTGGCAGTAATCattagtttcagccctaaaaAGCAACCATATCAAACCAATACAAGATATTTTTGTGGGATACAGAAATCCTGACACCGGTTAAAACAAAGGTCCGACAAATAGTTTTCACTCTATAGAGTCTTTTAGAACGAATGGTAATTAGTAGAACTACAGTGAGTGGGGAATATATTTGCAAGGAGATTTAGGAATTTCCAGCAGCGTACTTACACCGCAAGTAGTGATATGGCTTTCACATCTTACAAGTGAAATATTATATGGCAGTAGCCAAGCCAAAGAAAAGGTCCTCCTCCAGGGTCCAAATAATTATAAGAGTGCCATAACAGATCAAACATTATTTCCTTGACCTTGTCTCCAGCTTGAGGAACGGCTCAGACTTTTTGGCTGAAAGCTCAGGCAGCAAAAAATCTCTCTGTCTGCAGGAGCTCTCGCTACACGGACCTGACGTTTACACAGGATTAGAGATTCATTCAGCATTAAGTAAATGACCCTCTGCCGGCCAGGAGCAACACTTCTGGTTGTTTGGATTCTGTGGTACAGAATTCACACAGGGATTAGTTTAAATAAATCAGCTGTTTTGGCAAAGTCAGAATAGTGCAAGCCAAAAGAATCCTTGCATATATGCATTAGTCTGAAGtacctgaaaaaatgactttttcCAATGACACATTCTTTGGAGTGTCAGCTATGTCCATGCACTTGCTTTTCATCCACATTTAGGATATTGCATATTTCAGAAAACAATGTGTTTTTCAGCTGCACAGATGCACTGTGGTCTGCACACCACATCTGAGAAAACACTGCTTGTTGACTCACACCATCATAATCTTATTGAATCTAAGGACGTTAAAGAAAGTCGATGAAACTCAACATGATGATGTGAGGTTATATTTTCAGAGCATGATGCAACACTTTTCTTTAAAGGGGTAACAATGTCCCTtttcaagttaaaaaaaattaaatgaatattaaacaactgaattttttaaataaaaataaaaagccacaggtcttgttttttg

Function

GO: NA

KEGG:

id description
ko00240 Pyrimidine metabolism
ko03030 DNA replication
ko03460 Fanconi anemia pathway
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU253107 True 1281 lncRNA 0.39 1 23438240 23439520

Neighbor

gene id symbol gene type direction distance location
hlx1 hlx,LOC102784911 coding upstream 42904 23391206 ~ 23395336 (+)
slc35f6 slc35f6 coding upstream 57026 23371884 ~ 23381214 (+)
kcnk3a kcnk3,LOC102784354 coding upstream 89884 23307723 ~ 23348356 (+)
LOC120546473 NA coding upstream 184791 23246999 ~ 23253449 (+)
ezrb ezr,LOC103355633 coding upstream 201068 23198834 ~ 23237172 (+)
mia3 mia3 coding downstream 83367 23522887 ~ 23539844 (+)
rnf8 NA coding downstream 109058 23548578 ~ 23554266 (+)
slc35b2 slc35b2 coding downstream 150448 23589968 ~ 23597399 (+)
rbm25b rbm25,LOC108233444,LOC103353665,LOC102789801 coding downstream 171489 23611009 ~ 23624138 (+)
atp6v1d atp6v1d coding downstream 201355 23640875 ~ 23644644 (+)
G186843 NA non-coding upstream 2889 23435136 ~ 23435351 (+)
G186842 NA non-coding upstream 5857 23420899 ~ 23432383 (+)
G186747 NA non-coding upstream 162780 23268798 ~ 23275460 (+)
G186726 NA non-coding upstream 293950 23143959 ~ 23144290 (+)
G186725 NA non-coding upstream 294592 23143430 ~ 23143648 (+)
LOC120546283 NA non-coding downstream 36179 23475699 ~ 23506564 (+)
G186882 hsp90ab1 non-coding downstream 163116 23602636 ~ 23607535 (+)
G186901 mpp5 non-coding downstream 208059 23647579 ~ 23649568 (+)
G186902 mpp5 non-coding downstream 210876 23650396 ~ 23658430 (+)
G186905 gphn,LOC106608213 non-coding downstream 227417 23666937 ~ 23668127 (+)
rsph3 rsph3 other upstream 241244 23192638 ~ 23196996 (+)
ppp2r5a ppp2r5a other upstream 295600 23095912 ~ 23142640 (+)
dtl dtl other upstream 342735 23087820 ~ 23095505 (+)
si:ch211-22i13.2 NA other upstream 472230 22962033 ~ 22966010 (+)
kcns3b kcns3,LOC103372653 other upstream 627720 22807879 ~ 22810520 (+)
tcte1 NA other downstream 119978 23559498 ~ 23564429 (+)
nfkbie nfkbie other downstream 138858 23578378 ~ 23589689 (+)
G186975 NA other downstream 640083 24079603 ~ 24083104 (+)
LOC120547070 NA other downstream 705477 24144997 ~ 24146762 (+)
extl3 extl3 other downstream 715967 24155487 ~ 24187864 (+)

Expression


Co-expression Network