tcte1


Basic Information

Item Value
gene id tcte1
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 23559498 ~ 23564429 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU253175
TCACTCAACCTGCGTCTCAACCGATTGAGAGATGACGGGGGGCAGGCTATTGGCAAAGCCTTGCTGAACAACAACACCTTGCTTCACCTGCATCTGGGAGGCAATGAGTTAACTGGGCCTACTGCAGTCACACTGTCTAAAGTTCTAGTTCAGAGTAACACCCTGAAGAGCATCAATCTCTCCTGCAACAACCTATGTGTGgatggAGGCAGAGCTCTGGAGGAGGCGATGTCTCACAACACCAGCGTAACAGAATGTGATATCCGTCTGACGGAGGTTGACAAGCAGAGCGTTTCCTTCATCAACCAGGTGGTTTGGGccaaccagagtttagaacaAAAGAGACATGCTCAAGAGAGTAAAACCAAGTAAACGTCAACAGCTTCTTTTTGAAATACAAACCCACCTTCATTATTAATTGATTCCTGCTTTCCCGTATTCATTTAGCCACAGAGCATGACCACTATATGCCAACTCTGCATCTCAAACTGAAGTAGCTGATTTTAAACAAAATTTCATTGCACCAAAAAGCACAAAATATATAGTCCTATTGATAATATGGTAGCTAATTggcaaaatgtaaatgatgtgATTTCACACCAGTATGTCTCTAGTATCTCTTCCCTTGTTGCAGCCTGTACTATAactataactttaaaaaaaacatgtaaaaactaCAAGCAA
>XM_039782883.1
TCTATCGTTTATCAAACGTTTACAACGTTTTACAAGGTTTTTCAACGATTCCCTAGATATCTGTAAAAGTTAGCGAAGTTAGTCGcagtttagctaacgttagtctcacattgccagacctacctagctagctagctatctccACATCGCTTTAGCTAACATAGCTAAGGATCGAGGAGGCTCTGCTAACGTTAATTTACTTTAACTTACTTTAGACACAGTTTTTGCTGGCAGCATAATGTGGCAGCATGTTGACGTTAGCCAATGCCCATATATTTTATAGTTAGAGTCTAGTCACAATTTATTCAGGCGCTAAATGTCATTAAACAAACTATATCAACACCAGAAAATAAGCAAGACTGACTCCATTTACAATTGCTGGGATGTCCAAATTTTAATGTGTAATTTGATGTTTCTTCTTTTAAGACAGAGGATAGTCTACAAAAACCCTGCAACAATGCGTAGGTCCCCATATTCTCCTGGAGCCAACCTCAACCCAGTTGAAGACTTCAGAAAGATGAGGAGGATTATTGCTGAAGATCCAGACTGGTCTCTGAATATAGTTCCTTGTTTATCAAAACTCTGTCTGCAAAGCATCGAGAGAAACTTTGAGGGAAAGCCAATATTTGAAGAGCTTACTCCCATCCAGAAAGACTTTGTGCAGGAGAACCTGTCTACCTCCCTGCCCCTGCATGTCACAGCCAACTTGATCAGCGATGGTGTCTATTGGAAGAGGTGCTGCGAGCAGCGGTGGGACCTTTGTGACGTCTCTCACTATGGCCACAGCTGGAAACGAATGTTCTTTGAGAGGCACATGGAGACCATTATTGAGCTTTTCATCCCAGAAGTTACAGAGACCAAGACAGTTCTAGTGATGGTACCTCTTTGTAGGAACTACGTCAAGAGGCTGGACATCTCCCAACTCCTGCCACCTATCAAGGAGCCCcagaatgaggaggaggaggaatttGGCTTAGAGTTGGCAAGTGACAATGAGTACGACAGACCATCTTTGGACCACTTTGACTTTAACATCCTCCTTGACAAGCTAACAAAACTGGAAGAGCTCCATTTAGTGTACAGGGTCAAACAATGTGGTATGAACTTCGAATGGAAGATGTTTGAGATGACCACCAGAGATTGTGAGTCCCTTGCCAAGGCCCTTAAGTCCTGTAAGACTTTGAAGCTTCTAAAGCTCCATCAAAGCCACATTGAGGATGAAAAGTGCCGGCTACTGGTGAAAGACCTTTTGGACCACCCGTCCCTGAGGGAGCTTGACTTCTCCCACAACCTGATCGGAGACAAAGGAGCCAGAGCCATCGGAAAGCTGCTCAACAGGAGTAAACTGGAGATCCTGAACTTGTGTGACAACGAAATTAGAGGCCTGGGAGCCAAAGCTATAGCTCACGCATTGTCCAAGAACTCCACCCTTTTGTCACTCAACCTGCGTCTCAACCGATTGAGAGATGACGGGGGGCAGGCTATTGGCAAAGCCTTGCTGAACAACAACACCTTGCTTCACCTGCATCTGGGAGGCAATGAGTTAACTGGGCCTACTGCAGTCACACTGTCTAAAGTTCTAGTTCAGAGTAACACCCTGAAGAGCATCAATCTCTCCTGCAACAACCTATGTGTGgatggAGGCAGAGCTCTGGAGGAGGCGATGTCTCACAACACCAGCGTAACAGAATGTGATATCCGTCTGACGGAGGTTGACAAGCAGAGCGTTTCCTTCATCAACCAGGTGGTTTGGGccaaccagagtttagaacaAAAGAGACATGCTCAAGAGAGTAAAACCAAGTAAACGTCAACAGCTTCTTTTTGAAATACAAACCCACCTTCATTATTAATTGATTCCTGCTTTCCCGTATTCATTTAGCCACAGAGCATGACCACTATATGCCAACTCTGCATCTCAAACTGAAGTAGCTGATTTTAAACAAAATTTCATTGCACCAAAAAGCACAAAATATATAGTCCTATTGATAATATGGTAGCTAATTggcaaaatgtaaatgatgtgATTTCACACCAGTATGTCTCTAGTATCTCTTCCCTTGTTGCAGCCTGTACTATAactataactttaaaaaaaacatgtaaaaactaCAAGCAAAAAAACTGTGATTAAATGTGTCAACAGCATATGTTAAGACATAGACCATATATCCAGTTTACAATACACGAAGCATCACATGCTTAACTTTTCTGGGATGTGGCAACAATTGTCATAAAGTAATTTTTGACACA
>XM_039782884.1
GTTCCATTATCTGATGTATTCTTAAAGCAGTGGCAAACACTATAAATGCTAAAAGCGTTAGTTAGTTACAGCATGTTTATCGAAGTTAACCGTTCTTGCCGTAAGGTAACTTGAAGGGCTGCGTGCTCAATATTTCCTTGGTTGAAGAAGTAAAGTAAAGCTAGAGCGTTCTGTTACCTAGGAGACAGTTGAAGCTCAGACCAGCGCactgcagACAGAGGATAGTCTACAAAAACCCTGCAACAATGCGTAGGTCCCCATATTCTCCTGGAGCCAACCTCAACCCAGTTGAAGACTTCAGAAAGATGAGGAGGATTATTGCTGAAGATCCAGACTGGTCTCTGAATATAGTTCCTTGTTTATCAAAACTCTGTCTGCAAAGCATCGAGAGAAACTTTGAGGGAAAGCCAATATTTGAAGAGCTTACTCCCATCCAGAAAGACTTTGTGCAGGAGAACCTGTCTACCTCCCTGCCCCTGCATGTCACAGCCAACTTGATCAGCGATGGTGTCTATTGGAAGAGGTGCTGCGAGCAGCGGTGGGACCTTTGTGACGTCTCTCACTATGGCCACAGCTGGAAACGAATGTTCTTTGAGAGGCACATGGAGACCATTATTGAGCTTTTCATCCCAGAAGTTACAGAGACCAAGACAGTTCTAGTGATGGTACCTCTTTGTAGGAACTACGTCAAGAGGCTGGACATCTCCCAACTCCTGCCACCTATCAAGGAGCCCcagaatgaggaggaggaggaatttGGCTTAGAGTTGGCAAGTGACAATGAGTACGACAGACCATCTTTGGACCACTTTGACTTTAACATCCTCCTTGACAAGCTAACAAAACTGGAAGAGCTCCATTTAGTGTACAGGGTCAAACAATGTGGTATGAACTTCGAATGGAAGATGTTTGAGATGACCACCAGAGATTGTGAGTCCCTTGCCAAGGCCCTTAAGTCCTGTAAGACTTTGAAGCTTCTAAAGCTCCATCAAAGCCACATTGAGGATGAAAAGTGCCGGCTACTGGTGAAAGACCTTTTGGACCACCCGTCCCTGAGGGAGCTTGACTTCTCCCACAACCTGATCGGAGACAAAGGAGCCAGAGCCATCGGAAAGCTGCTCAACAGGAGTAAACTGGAGATCCTGAACTTGTGTGACAACGAAATTAGAGGCCTGGGAGCCAAAGCTATAGCTCACGCATTGTCCAAGAACTCCACCCTTTTGTCACTCAACCTGCGTCTCAACCGATTGAGAGATGACGGGGGGCAGGCTATTGGCAAAGCCTTGCTGAACAACAACACCTTGCTTCACCTGCATCTGGGAGGCAATGAGTTAACTGGGCCTACTGCAGTCACACTGTCTAAAGTTCTAGTTCAGAGTAACACCCTGAAGAGCATCAATCTCTCCTGCAACAACCTATGTGTGgatggAGGCAGAGCTCTGGAGGAGGCGATGTCTCACAACACCAGCGTAACAGAATGTGATATCCGTCTGACGGAGGTTGACAAGCAGAGCGTTTCCTTCATCAACCAGGTGGTTTGGGccaaccagagtttagaacaAAAGAGACATGCTCAAGAGAGTAAAACCAAGTAAACGTCAACAGCTTCTTTTTGAAATACAAACCCACCTTCATTATTAATTGATTCCTGCTTTCCCGTATTCATTTAGCCACAGAGCATGACCACTATATGCCAACTCTGCATCTCAAACTGAAGTAGCTGATTTTAAACAAAATTTCATTGCACCAAAAAGCACAAAATATATAGTCCTATTGATAATATGGTAGCTAATTggcaaaatgtaaatgatgtgATTTCACACCAGTATGTCTCTAGTATCTCTTCCCTTGTTGCAGCCTGTACTATAactataactttaaaaaaaacatgtaaaaactaCAAGCAAAAAAACTGTGATTAAATGTGTCAACAGCATATGTTAAGACATAGACCATATATCCAGTTTACAATACACGAAGCATCACATGCTTAACTTTTCTGGGATGTGGCAACAATTGTCATAAAGTAATTTTTGACACA

Function

NR:

description
T-complex-associated testis-expressed protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253175 False 684 lncRNA 0.42 2 23562276 23564295
XM_039782883.1 True 2253 mRNA 0.43 4 23559780 23564429
XM_039782884.1 False 2041 mRNA 0.44 5 23559498 23564429

Neighbor

gene id symbol gene type direction distance location
rnf8 NA coding upstream 5232 23548578 ~ 23554266 (+)
mia3 mia3 coding upstream 19654 23522887 ~ 23539844 (+)
hlx1 hlx,LOC102784911 coding upstream 164162 23391206 ~ 23395336 (+)
slc35f6 slc35f6 coding upstream 178284 23371884 ~ 23381214 (+)
kcnk3a kcnk3,LOC102784354 coding upstream 211142 23307723 ~ 23348356 (+)
slc35b2 slc35b2 coding downstream 25539 23589968 ~ 23597399 (+)
rbm25b rbm25,LOC108233444,LOC103353665,LOC102789801 coding downstream 46580 23611009 ~ 23624138 (+)
atp6v1d atp6v1d coding downstream 76446 23640875 ~ 23644644 (+)
tmem121ab tmem121,LOC101465360,LOC102792477,LOC107377718 coding downstream 465624 24030053 ~ 24068592 (+)
nt5c1bb LOC104946496,LOC101163217,LOC103359106 coding downstream 642897 24207326 ~ 24215960 (+)
LOC120546283 NA non-coding upstream 52934 23475699 ~ 23506564 (+)
G186841 NA non-coding upstream 119978 23438240 ~ 23439520 (+)
G186843 NA non-coding upstream 124147 23435136 ~ 23435351 (+)
G186842 NA non-coding upstream 127115 23420899 ~ 23432383 (+)
G186747 NA non-coding upstream 284038 23268798 ~ 23275460 (+)
G186882 hsp90ab1 non-coding downstream 38207 23602636 ~ 23607535 (+)
G186901 mpp5 non-coding downstream 83150 23647579 ~ 23649568 (+)
G186902 mpp5 non-coding downstream 85967 23650396 ~ 23658430 (+)
G186905 gphn,LOC106608213 non-coding downstream 102508 23666937 ~ 23668127 (+)
G186954 NA non-coding downstream 265096 23829525 ~ 23861934 (+)
rsph3 rsph3 other upstream 362502 23192638 ~ 23196996 (+)
ppp2r5a ppp2r5a other upstream 416858 23095912 ~ 23142640 (+)
dtl dtl other upstream 463993 23087820 ~ 23095505 (+)
si:ch211-22i13.2 NA other upstream 593488 22962033 ~ 22966010 (+)
kcns3b kcns3,LOC103372653 other upstream 748978 22807879 ~ 22810520 (+)
nfkbie nfkbie other downstream 13949 23578378 ~ 23589689 (+)
G186975 NA other downstream 515174 24079603 ~ 24083104 (+)
LOC120547070 NA other downstream 580568 24144997 ~ 24146762 (+)
extl3 extl3 other downstream 591058 24155487 ~ 24187864 (+)
G187094 bpnt1,LOC102799416 other downstream 942484 24506913 ~ 24507813 (+)

Expression


Co-expression Network