Gene
RNA
| Item | Value |
|---|---|
| gene id | G186902 |
| gene name | mpp5 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 23650396 ~ 23658430 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| mpp5 | MAGUK p55 subfamily member 5 |
| description |
|---|
| PREDICTED: MAGUK p55 subfamily member 5 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU253190 | True | 481 | lncRNA | 0.57 | 4 | 23650396 | 23658430 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| atp6v1d | atp6v1d | coding | upstream | 5752 | 23640875 ~ 23644644 (+) |
| rbm25b | rbm25,LOC108233444,LOC103353665,LOC102789801 | coding | upstream | 26258 | 23611009 ~ 23624138 (+) |
| slc35b2 | slc35b2 | coding | upstream | 52997 | 23589968 ~ 23597399 (+) |
| rnf8 | NA | coding | upstream | 96130 | 23548578 ~ 23554266 (+) |
| mia3 | mia3 | coding | upstream | 110552 | 23522887 ~ 23539844 (+) |
| tmem121ab | tmem121,LOC101465360,LOC102792477,LOC107377718 | coding | downstream | 371623 | 24030053 ~ 24068592 (+) |
| nt5c1bb | LOC104946496,LOC101163217,LOC103359106 | coding | downstream | 548896 | 24207326 ~ 24215960 (+) |
| si:dkey-174m14.3 | LOC102302461,LOC103359114,LOC101468873,LOC102795766,LOC102194912 | coding | downstream | 566627 | 24225057 ~ 24252680 (+) |
| LOC120546721 | NA | coding | downstream | 601118 | 24259548 ~ 24278489 (+) |
| rngtt | rngtt | coding | downstream | 620990 | 24279420 ~ 24376144 (+) |
| G186901 | mpp5 | non-coding | upstream | 828 | 23647579 ~ 23649568 (+) |
| G186882 | hsp90ab1 | non-coding | upstream | 42861 | 23602636 ~ 23607535 (+) |
| LOC120546283 | NA | non-coding | upstream | 143832 | 23475699 ~ 23506564 (+) |
| G186841 | NA | non-coding | upstream | 210876 | 23438240 ~ 23439520 (+) |
| G186843 | NA | non-coding | upstream | 215045 | 23435136 ~ 23435351 (+) |
| G186905 | gphn,LOC106608213 | non-coding | downstream | 8507 | 23666937 ~ 23668127 (+) |
| G186954 | NA | non-coding | downstream | 171095 | 23829525 ~ 23861934 (+) |
| G186961 | NA | non-coding | downstream | 209850 | 23868280 ~ 23925648 (+) |
| G186972 | NA | non-coding | downstream | 414333 | 24072763 ~ 24147218 (+) |
| G187027 | NA | non-coding | downstream | 552983 | 24211413 ~ 24234751 (+) |
| nfkbie | nfkbie | other | upstream | 60707 | 23578378 ~ 23589689 (+) |
| tcte1 | NA | other | upstream | 85967 | 23559498 ~ 23564429 (+) |
| rsph3 | rsph3 | other | upstream | 453400 | 23192638 ~ 23196996 (+) |
| ppp2r5a | ppp2r5a | other | upstream | 507756 | 23095912 ~ 23142640 (+) |
| dtl | dtl | other | upstream | 554891 | 23087820 ~ 23095505 (+) |
| G186975 | NA | other | downstream | 421173 | 24079603 ~ 24083104 (+) |
| LOC120547070 | NA | other | downstream | 486567 | 24144997 ~ 24146762 (+) |
| extl3 | extl3 | other | downstream | 497057 | 24155487 ~ 24187864 (+) |
| G187094 | bpnt1,LOC102799416 | other | downstream | 848483 | 24506913 ~ 24507813 (+) |
| lama2 | lama2,LOC104942190 | other | downstream | 1151649 | 24810079 ~ 25009457 (+) |
