G187378


Basic Information

Item Value
gene id G187378
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 25902938 ~ 25905402 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU253870
gccgtttttatttttgtgtaaaAATCACACAGCTGCTAGTTGACTCTGCAGAGATACAGTACATCCATGCAGTTAAACATCTAGGATCCCACAGCCAAGAGAGAAGGAATTAAATATAATATTCTTTCGCTGTTAGTCAGCAATTAATGCAAATTTACACGAGTCCAAAAGTGTGTATCATGTACAATATACAACACAGATCTGGGTTCAAATAGCATTCAAATCCCACCAAAGACTTTGTGATTGCTTCTGCCTGCCTGGATTGCCTTTAGGGTTTGAGGATGAATGGGGAGCTATTGTGCTAGCAAACATGAAGGTTTTTAAATGGTATTAGTTCCAGGTCTGGAAACAATATCACTCGCtcgcacacactctcacacacctcACTATCACACACTTGCACACCTCACTATCACACACTCGCAcacctatcacacacacacacactctctctcacacacctcactatcacacacacactcactcacctcactatcactctctcacacacctcACTATCATACACACctcactatcacacacacactcacactcactgtCACACACCTCACtatcactctctcacacacacgcacacacaaaaaagaaggCGAGCCTTGATACAACAAGGAAGAGAGGTCAGCCAGTCACCATGGAAACAACTTACACGGGGTAAGGCTTTAGAAGAACACACAGGAAGTTCcagggacaaaaacatttataaaaataaaaaaagggtaCTGGCACAAAAACCTCTTAGTTTCCAAGGATGTACTGAAGAAATAAAAACTTAAGTGgttcattatttctttttttcttcttaaagcatcttttttttttttttttttttaaaacaaagccCATGTCGAGGTGAAAGAGCAGAGTGATAGTTCAGTCATTTGGCATCAAGTTAAACCATTCAGTCACATCAAACCCCAAACACtgtaacaaaagaaaaaaaaacaagacattcatTCACCGCATCATGCCATCAACACTCACATATGTGGACTTCAAGGGGCAGtaagacgagagagagagagagagagagagagagagagagagaggtgggctAAATTTGTGTCACAagatgagtaaaaaaaaaaaaaagccttcacCATAATGATTTGGCCAATAAAGGcctcacaaaaacatacacaaaacaatCCTGTCCAGAAGTAGCCCAGTATGTTTTATGGAGAGACTGACTACACCAAAactccagtaaaaaaaaaaagaaaaaagtaaattttacATTCCTTGTTTACTGGCAGATTCCTGGTGTACAGGTTTTCATGTTTTCAAAGCCTCTAATATGTGTTGCAGCATGTCTCTGTGATTCTGCGATTCATTTTTTAACAGATTGTTTGAAAATGGTGACATTCGGGAGGCAAATGTTCAGGAGAGAGACGGCCCTTGATGatatttaaagcagaaatgcttTTAGAGTCCTGTTTTCCACAATTATTGGCCAGTTTTGACTAGGTATTATCAGCAGTAGAAAAGTAGGTACGCCAATAAGTGAGAAGACCAAGGAACAGTTCTACTTTTTTGGAAATACACTTACACGCTTTCCTTCATatccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253870 True 1587 lncRNA 0.39 3 25902938 25905402

Neighbor

gene id symbol gene type direction distance location
clu clu,LOC102791322 coding upstream 1356 25888269 ~ 25901582 (+)
LOC120546553 NA coding upstream 66506 25830950 ~ 25836432 (+)
fmn1 fmn1 coding upstream 93016 25780782 ~ 25809922 (+)
aven NA coding upstream 252375 25609997 ~ 25650563 (+)
emc7b emc7 coding upstream 298204 25597678 ~ 25604734 (+)
heca heca coding downstream 31899 25937301 ~ 25949410 (+)
knl1 NA coding downstream 64996 25970398 ~ 25992873 (+)
jag2b jag2,LOC107377795 coding downstream 142070 26047472 ~ 26102398 (+)
esr2a LOC103368808 coding downstream 234007 26139409 ~ 26159436 (+)
hadhb hadhb coding downstream 392924 26298326 ~ 26310715 (+)
G187310 NA non-coding upstream 376066 25526447 ~ 25526872 (+)
G187299 LOC104926707,LOC100302438 non-coding upstream 462395 25405717 ~ 25440543 (+)
G187301 thbs1,LOC104926707 non-coding upstream 468632 25434001 ~ 25434306 (+)
G187260 NA non-coding upstream 563672 25338845 ~ 25339266 (+)
G187241 max,susd6,LOC103359378,LOC102235228,LOC107988062 non-coding upstream 595539 25261835 ~ 25307399 (+)
G187431 NA non-coding downstream 61604 25967006 ~ 25967300 (+)
LOC120547280 NA non-coding downstream 342376 26247778 ~ 26249685 (+)
G187508 NA non-coding downstream 366966 26272368 ~ 26272595 (+)
G187535 NA non-coding downstream 409720 26315122 ~ 26315654 (+)
G187536 NA non-coding downstream 419114 26324516 ~ 26324734 (+)
trnat-ugu_3 NA other upstream 682998 25219868 ~ 25219940 (+)
lama2 lama2,LOC104942190 other upstream 893481 24810079 ~ 25009457 (+)
G187094 bpnt1,LOC102799416 other upstream 1395125 24506913 ~ 24507813 (+)
extl3 extl3 other upstream 1715074 24155487 ~ 24187864 (+)
LOC120547070 NA other upstream 1756176 24144997 ~ 24146762 (+)
abracl abracl,LOC103376263 other downstream 24174 25929576 ~ 25935271 (+)
LOC120546493 NA other downstream 49848 25955250 ~ 25968925 (+)
nudt14 nudt14,LOC107560374 other downstream 101452 26006854 ~ 26036232 (+)
atp5mj NA other downstream 352073 26257475 ~ 26260895 (+)
gareml garem2 other downstream 359787 26265189 ~ 26283008 (+)

Expression


Co-expression Network