abracl (abracl,LOC103376263)


Basic Information

Item Value
gene id abracl
gene name abracl,LOC103376263
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 25929576 ~ 25935271 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU253932
GAGCACACATTGAACGCATCAACATTATCCACCGGAGCAGATTTACCAGAAAGTCGTCCATCGTTGTATTAGAATCAAGAAGAGTTCAAAGATGCTGATGGTCAAACCAGCGTGAAGTTCGGGGTCTTATTTAATGACGACCAGTGTGCCAACATCTTCGAGGCTTTGGTGGGCACCCTGAAGGCCGCCAAGAAGAAGAAGGTGGTCAATTTCCAGGGCGAGTTGCTTCTGCAAGGTGTCCACGATAACGTTGATATCGTCCTGCTCTAGGAATGAGGCTAAAGTTTGAACCAGATGGCCTTCTAGCGACTCACTGAGTCCTAGTCAAATACTGAGCTTCTGCAGTGTACCAGCTTGTTTTCAGTTCTCTTCCATCATGTGCAAGGCTCAGTATTTGAATTCAAACATAATGACCAAGCAAATAAGAACAAAAAGTACACTTACAGGCTCAGCTGGCATGTCTGGATatgatttaatttgatttcaCTGTGCCAAACGGTatcacaaaaaataatttgagaaTATTTTAGGTTCTCAGGGGCTGAATTACGGCCACATTCATAGTTTCATATGACAAGGACAAATGGTGTTAATCTCTTTCTCAGGCGCTGCAGTTATATCAAAAACTGGTCTGAAATATAATTTTGATATACACTTTTAAGACTACGAGCGCACAAATCAGGAATGTAATTCTTTGTGTAACTCATTCATTTGGGTATATTTTGTTCATTTCTGGGAGAAATTACAGTATAAGGTAACTATCACAACCAAATGCCTCTCTTGATGGTATCGGTGTCAGGATACAGTAGCACAGAGCAAGACACTGGCTAGATTTAGCAACTTTGACAAAgtttttcttcacattttaAATTAGAGCCCTCTGATTTTGACAAATTGTTTGTAATGGGTACttgtttttaaagctgcactagtcTCTCTTATCAGTCTCAAGTGGCAATGGGAGTTAAGATCTCATTACCTTGAATTCATATAATGTGTTTTCACGTTAAAtctagtgcagctttaagacaATGGGTAGTGTATTTCCACCAACCGTGTCAACAAATGGCAGTTCCATTTATTTACATGAGCCATTTCTACTACCTCTTGTGGACTTTGTAAAAAGATGCTGTTAGACCAGTGCTTTTGGATCTATGAGAACAATTCCTTCATAGAAATTACAAAGACGAATGCATTTCAAGAAAGACTTTTGCACCTTTTTGTACTCGTTGCAATCTGCTAGAGTAGTTTTTATTCCATCTTTTTACATGTGGTGTGGTAAATAGTGAATGTTCTCTGCTAAACAAACTCCAAAACCTGCCTTTCATAAGAAACCGTTGATGAGCAAATGGCGAATGTATTTCTTGTGCAATTTTTATTAGTGTATAATAATTACAGGGTGATTGGTGCCAAATGCAAAAAGATGAATTTGTGATGTTTCTCAGGACCAAATCAACACAACCAAAATATGTTTAATTGTCCTGTAGCTTAAATTAGGTGTCTCACCTATGACGCAAGTTGTGCATTTatagttttattcattttattttttatttaccacGATTTATTCTGTACTGTAGGTCAAATGATACTTGCAGATCAGGCGTGCCTACTTTGGTTTTGCTTGGTTTCCCACAATCAAAACTCATCACTTGTTTTATTGTGTCAAaggtcctttttgttttttcattttgctGAACAAGCACTTTCAGCTTGTTGCGTGGAGGTCCAAAGTggtgaaaattaaaatgaattaaaatatgACATGAAGTGAATAATAATATGAACAAATACAGACcatatgtaataaaaaatgaaataatccAATTTCCTTTTAAAACTCCAA
>TU253934
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaccaaaaaaaaaacaaataattttttttttttttttttttatttcaaaatctCATTGTTGATCATAAAGAATTTGGCATGACAGATAGAGCTACGTGATTGGCTGTTCACTCATTCAGAGCAAAGCATCAGCCAATCAAATACCTGGCTCGGCCCTGTTTGTCTTTTCATAAAAACTTTGTGATGAAACGTGGCTTTGATTAGTTagtaaattacttttttaaataaaaaccttttGTAAAATAACCTGTAAAACAATCCTATTTTGATTGAATTTAAACTGTACTGGAATATTTAACAATTTAATGGTTCGAATTGTCATTTTCTCTTTATTCATATAGTTCATTCACATAATACATTTCACAATATAtctatttaattttgaccacTTTGGGTCTCCATAGTTTAGATAAGTGGCTGCATGTATTTGGATGCAAGAAGAAATATTTGTCTTGGATAAACACTAGAAGGACCAACAATCTCCAAGTGTTTGGCTGAATCTAACAACTCCTACATGGCAGCTTTTTGTGCTACGCTGCATAATATCAAGCATTAAATATCACAAAGAAGAGAGGCAAGCGATCGCCGGGTGCCTCATCTGCAAGTTTTATAAGACCCTGTTCACATTCACTGCTGTTGTATTAACCTTCCTGAGTTTTTTaggctcaggtgggggctgtttTGCTTCACTTTGACTTGAATtatgtgattttgtttttttctttttttttcttcctgaaaCGTATAGGAGATTGTGCTCTAAACAGCATTAGTGGCATATATCATGGATCCGAAATTTGTCAAAATCAGGAAAACAGAATGAGCTTAATCGTATGCTAATTATGAATGAAGCTGAAATGAAGCctagaaaacaaaatgtaaccaTCAGAATACGAAACAATAGGCTAAGTAGAGGTCTGAAAAGTTAGAGTGAGGATAAACCATGCTGCTTGCATCACTGTCATCTAGGGTTATCCTGCTGTGTGTTGCACTGGAGTGAGCTGAACATAAATGCAAATTACAGCACAAGTTAACACTTAGCAAGAGGAGAAAGTTATCATCAGAGCGGTCCCAATACCTCAAGCCATTTCTGTGAACTATTGGGATGCCTGCatgatgtgttcatgtgtgtcaTTACTGTCTGTTTTTGTATTGGCAATAACACATTCCTAAAATAACAAAGGTTTCTGTTACTGTGGAATACGCTGCGAGAAATAAAATCTTTACTCT
>XM_039782466.1
CATACCAGTTAAAGGCGGTAATGCAAAGAAGAAGAGGGACTTTTCCGAGCACACATTGAACGCATCAACATTATCCACCGGAGCAGATTTACCAGAAAGTCGTCCATCGTTGTATTAGAATCAAGAAGAGTTCAAAGCTACAATGAATGTCACTCATGAAATACAATTGCTGGTGCAGGAGATTAACCGCCTCGGCAGTAAAAATGCTGATGGTCAAACCAGCGTGAAGTTCGGGGTCTTATTTAATGACGACCAGTGTGCCAACATCTTCGAGGCTTTGGTGGGCACCCTGAAGGCCGCCAAGAAGAAGAAGGTGGTCAATTTCCAGGGCGAGTTGCTTCTGCAAGGTGTCCACGATAACGTTGATATCGTCCTGCTCTAGGAATGAGGCTAAAGTTTGAACCAGATGGCCTTCTAGCGACTCACTGAGTCCTAGTCAAATACTGAGCTTCTGCAGTGTACCAGCTTGTTTTCAGTTCTCTTCCATCATGTGCAAGGCTCAGTATTTGAATTCAAACATAATGACCAAGCAAATAAGAACAAAAAGTACACTTACAGGCTCAGCTGGCATGTCTGGATatgatttaatttgatttcaCTGTGCCAAACGGTatcacaaaaaataatttgagaaTATTTTAGGTTCTCAGGGGCTGAATTACGGCCACATTCATAGTTTCATATGACAAGGACAAATGGTGTTAATCTCTTTCTCAGGCGCTGCAGTTATATCAAAAACTGGTCTGAAATATAATTTTGATATACACTTTTAAGACTACGAGCGCACAAATCAGGAATGTAATTCTTTGTGTAACTCATTCATTTGGGTATATTTTGTTCATTTCTGGGAGAAATTACAGTATAAGGTAACTATCACAACCAAATGCCTCTCTTGATGGTATCGGTGTCAGGATACAGTAGCACAGAGCAAGACACTGGCTAGATTTAGCAACTTTGACAAAgtttttcttcacattttaAATTAGAGCCCTCTGATTTTGACAAATTGTTTGTAATGGGTACttgtttttaaagctgcactagtcTCTCTTATCAGTCTCAAGTGGCAATGGGAGTTAAGATCTCATTACCTTGAATTCATATAATGTGTTTTCACGTTAAAtctagtgcagctttaagacaATGGGTAGTGTATTTCCACCAACCGTGTCAACAAATGGCAGTTCCATTTATTTACATGAGCCATTTCTACTACCTCTTGTGGACTTTGTAAAAAGATGCTGTTAGACCAGTGCTTTTGGATCTATGAGAACAATTCCTTCATAGAAATTACAAAGACGAATGCATTTCAAGAAAGACTTTTGCACCTTTTTGTACTCGTTGCAATCTGCTAGAGTAGTTTTTATTCCATCTTTTTACATGTGGTGTGGTAAATAGTGAATGTTCTCTGCTAAACAAACTCCAAAACCTGCCTTTCATAAGAAACCGTTGATGAGCAAATGGCGAATGTATTTCTTGTGCAATTTTTATTAGTGTATAATAATTACAGGGTGATTGGTGCCAAATGCAAAAAGATGAATTTGTGATGTTTCTCAGGACCAAATCAACACAACCAAAATATGTTTAATTGTCCTGTAGCTTAAATTAGGTGTCTCACCTATGACGCAAGTTGTGCATTTatagttttattcattttattttttatttaccacGATTTATTCTGTACTGTAGGTCAAATGATACTTGCAGATCAGGCGTGCCTACTTTGGTTTTGCTTGGTTTCCCACAATCAAAACTCATCACTTGTTTTATTGTGTCAAaggtcctttttgttttttcattttgctGAACAAGCACTTTCAGCTTGTTGCGTGGAGGTCCAAAGTggtgaaaattaaaatgaattaaaatatgACATGAAGTGAATAATAATATGAACAAATACAGACcatatgtaataaaaaatgaaataatccAATTTCCTTTTAAAACTCCAATCAATGAACTCCACAATAACATTGTAGGTAATTtcttaggctttttttttttttttctcaaaatgtcctTTTCATAAAGTCTGTTTTTAACTTCAAAATGACATTTTTCCAAGTGactattttatttcaaaatctCATTGTTGATCATAAAGAATTTGGCATGACAGATAGAGCTACGTGATTGGCTGTTCACTCATTCAGAGCAAAGCATCAGCCAATCAAATACCTGGCTCGGCCCTGTTTGTCTTTTCATAAAAACTTTGTGATGAAACGTGGCTTTGATTAGTTagtaaattacttttttaaataaaaaccttttGTAAAATAACCTGTAAAACAATCCTATTTTGATTGAATTTAAACTGTACTGGAATATTTAACAATTTAATGGTTCGAATTGTCATTTTCTCTTTATTCATATAGTTCATTCACATAATACATTTCACAATATAtctatttaattttgaccacTTTGGGTCTCCATAGTTTAGATAAGTGGCTGCATGTATTTGGATGCAAGAAGAAATATTTGTCTTGGATAAACACTAGAAGGACCAACAATCTCCAAGTGTTTGGCTGAATCTAACAACTCCTACATGGCAGCTTTTTGTGCTACGCTGCATAATATCAAGCATTAAATATCACAAAGAAGAGAGGCAAGCGATCGCCGGGTGCCTCATCTGCAAGTTTTATAAGACCCTGTTCACATTCACTGCTGTTGTATTAACCTTCCTGAGTTTTTTaggctcaggtgggggctgtttTGCTTCACTTTGACTTGAATtatgtgattttgtttttttctttttttttcttcctgaaaCGTATAGGAGATTGTGCTCTAAACAGCATTAGTGGCATATATCATGGATCCGAAATTTGTCAAAATCAGGAAAACAGAATGAGCTTAATCGTATGCTAATTATGAATGAAGCTGAAATGAAGCctagaaaacaaaatgtaaccaTCAGAATACGAAACAATAGGCTAAGTAGAGGTCTGAAAAGTTAGAGTGAGGATAAACCATGCTGCTTGCATCACTGTCATCTAGGGTTATCCTGCTGTGTGTTGCACTGGAGTGAGCTGAACATAAATGCAAATTACAGCACAAGTTAACACTTAGCAAGAGGAGAAAGTTATCATCAGAGCGGTCCCAATACCTCAAGCCATTTCTGTGAACTATTGGGATGCCTGCatgatgtgttcatgtgtgtcaTTACTGTCTGTTTTTGTATTGGCAATAACACATTCCTAAAATAACAAAGGTTTCTGTTACTGTGGAATACGCTGCGAGAAATAAAATCTTTACTCTTGAAGCCTTGAA

Function

symbol description
abracl Predicted to be involved in regulation of actin filament-based process. Orthologous to human ABRACL (ABRA C-terminal like).

NR:

description
CF115 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253932 False 1846 lncRNA 0.37 2 25930048 25933947
TU253934 False 1311 lncRNA 0.33 2 25929576 25935259
XM_039782466.1 True 3282 mRNA 0.36 3 25930002 25935271

Neighbor

gene id symbol gene type direction distance location
clu clu,LOC102791322 coding upstream 27994 25888269 ~ 25901582 (+)
LOC120546553 NA coding upstream 93144 25830950 ~ 25836432 (+)
fmn1 fmn1 coding upstream 119654 25780782 ~ 25809922 (+)
aven NA coding upstream 279013 25609997 ~ 25650563 (+)
emc7b emc7 coding upstream 324842 25597678 ~ 25604734 (+)
heca heca coding downstream 2030 25937301 ~ 25949410 (+)
knl1 NA coding downstream 35127 25970398 ~ 25992873 (+)
jag2b jag2,LOC107377795 coding downstream 112201 26047472 ~ 26102398 (+)
esr2a LOC103368808 coding downstream 204138 26139409 ~ 26159436 (+)
hadhb hadhb coding downstream 363055 26298326 ~ 26310715 (+)
G187378 NA non-coding upstream 24174 25902938 ~ 25905402 (+)
G187310 NA non-coding upstream 402704 25526447 ~ 25526872 (+)
G187299 LOC104926707,LOC100302438 non-coding upstream 489033 25405717 ~ 25440543 (+)
G187301 thbs1,LOC104926707 non-coding upstream 495270 25434001 ~ 25434306 (+)
G187260 NA non-coding upstream 590310 25338845 ~ 25339266 (+)
G187431 NA non-coding downstream 31735 25967006 ~ 25967300 (+)
LOC120547280 NA non-coding downstream 312507 26247778 ~ 26249685 (+)
G187508 NA non-coding downstream 337097 26272368 ~ 26272595 (+)
G187535 NA non-coding downstream 379851 26315122 ~ 26315654 (+)
G187536 NA non-coding downstream 389245 26324516 ~ 26324734 (+)
trnat-ugu_3 NA other upstream 709636 25219868 ~ 25219940 (+)
lama2 lama2,LOC104942190 other upstream 920119 24810079 ~ 25009457 (+)
G187094 bpnt1,LOC102799416 other upstream 1421763 24506913 ~ 24507813 (+)
extl3 extl3 other upstream 1741712 24155487 ~ 24187864 (+)
LOC120547070 NA other upstream 1782814 24144997 ~ 24146762 (+)
LOC120546493 NA other downstream 19979 25955250 ~ 25968925 (+)
nudt14 nudt14,LOC107560374 other downstream 71583 26006854 ~ 26036232 (+)
atp5mj NA other downstream 322204 26257475 ~ 26260895 (+)
gareml garem2 other downstream 329918 26265189 ~ 26283008 (+)
tfap2d tfap2d other downstream 478420 26413691 ~ 26431397 (+)

Expression


Co-expression Network