atp5mj


Basic Information

Item Value
gene id atp5mj
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 26257475 ~ 26260895 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU254021
GAAACACTACACAGTGgagagtagaagaagaagaagaagcagattCCCCACACGACTTTGACGTTTAGCAGCAGCGTCTGTCCTGACCTTCTCACTGCAGCGTGACAAACTCGAAGATGGCTGGACGCGTGTTTGCAAGTTGGTGGGGCAAGATGAGCCCTTACTACACTAAGGCATACCAGGAGATGTGGGTGGGCCTTGGCATCATGACATACCTGTACTACAAAGTTTCCTATGGAGGCAAGAAGGCTGTGAAGGACAAGCCTGCCCATTGAGTTTTCCACCATGCCCACCACCCCTCCACCTGCTGTGAAATAAGGCCCAATCGTTAGTCCAGAAGTCCAGCTTCATATTTGAATTTTTGTTAATATGGAATAAAGTTGCTATCCAAAACTT
>XM_039780906.1
CTACATACCAAAACATGAATGAAACACTACACAGTGgagagtagaagaagaagaagaagcagattCCCCACACGACTTTGACGTTTAGCAGCAGCGTCTGTCCTGACCTTCTCACTGCAGCGTGACAAACTCGAAGATGGCTGGACGCGTGTTTGCAAGTTGGTGGGGCAAGATGAGCCCTTACTACACTAAGGCATACCAGGAGATGTGGGTGGGCCTTGGCATCATGACATACCTGTACTACAAAGTTTCCTATGGAGGCAAGAAGGCTGTGAAGGACAAGCCTGCCCATTGAGTTTTCCACCATGCCCACCACCCCTCCACCTGCTGTGAAATAAGGCCCAATCGTTAGTCCAGAAGTCCAGCTTCATATTTGAATTTTTGTTAATATGGAATAAAGTTGCTATCCAAAACTTT

Function

GO:

id name namespace
GO:0006091 generation of precursor metabolites and energy biological_process
GO:0022900 electron transport chain biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0005746 mitochondrial respirasome cellular_component
GO:0044429 obsolete mitochondrial part cellular_component
GO:0044455 obsolete mitochondrial membrane part cellular_component
GO:0019866 organelle inner membrane cellular_component
GO:0031966 mitochondrial membrane cellular_component
GO:0031967 organelle envelope cellular_component
GO:0031975 envelope cellular_component
GO:0070469 respirasome cellular_component
GO:0005740 mitochondrial envelope cellular_component
GO:0009055 electron transfer activity molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0022890 inorganic cation transmembrane transporter activity molecular_function
GO:0015002 heme-copper terminal oxidase activity molecular_function
GO:0015077 monovalent inorganic cation transmembrane transporter activity molecular_function
GO:0015078 proton transmembrane transporter activity molecular_function
GO:0008324 cation transmembrane transporter activity molecular_function
GO:0004129 cytochrome-c oxidase activity molecular_function
GO:0016675 oxidoreductase activity, acting on a heme group of donors molecular_function
GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor molecular_function

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04260 Cardiac muscle contraction
ko04723 Retrograde endocannabinoid signaling
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU254021 False 396 lncRNA 0.48 4 26257495 26260894
XM_039780906.1 True 417 mRNA 0.47 4 26257475 26260895

Neighbor

gene id symbol gene type direction distance location
esr2a LOC103368808 coding upstream 98039 26139409 ~ 26159436 (+)
jag2b jag2,LOC107377795 coding upstream 155077 26047472 ~ 26102398 (+)
knl1 NA coding upstream 264602 25970398 ~ 25992873 (+)
heca heca coding upstream 308065 25937301 ~ 25949410 (+)
clu clu,LOC102791322 coding upstream 355893 25888269 ~ 25901582 (+)
hadhb hadhb coding downstream 37431 26298326 ~ 26310715 (+)
map3k5 map3k5 coding downstream 255948 26516843 ~ 26596774 (+)
lrp11 lrp11,LOC102796877 coding downstream 336389 26597284 ~ 26604825 (+)
nup43 nup43 coding downstream 352875 26613770 ~ 26619262 (+)
lats1 lats1 coding downstream 359086 26619981 ~ 26628564 (+)
LOC120547280 NA non-coding upstream 7790 26247778 ~ 26249685 (+)
G187431 NA non-coding upstream 290175 25967006 ~ 25967300 (+)
G187378 NA non-coding upstream 352073 25902938 ~ 25905402 (+)
G187310 NA non-coding upstream 730603 25526447 ~ 25526872 (+)
G187299 LOC104926707,LOC100302438 non-coding upstream 816932 25405717 ~ 25440543 (+)
G187508 NA non-coding downstream 11473 26272368 ~ 26272595 (+)
G187535 NA non-coding downstream 54227 26315122 ~ 26315654 (+)
G187536 NA non-coding downstream 63621 26324516 ~ 26324734 (+)
LOC120546372 LOC103909865 non-coding downstream 618551 26879446 ~ 26885536 (+)
trnay-gua_55 NA non-coding downstream 618638 26879533 ~ 26879621 (+)
nudt14 nudt14,LOC107560374 other upstream 221243 26006854 ~ 26036232 (+)
LOC120546493 NA other upstream 288550 25955250 ~ 25968925 (+)
abracl abracl,LOC103376263 other upstream 322204 25929576 ~ 25935271 (+)
trnat-ugu_3 NA other upstream 1037535 25219868 ~ 25219940 (+)
lama2 lama2,LOC104942190 other upstream 1248018 24810079 ~ 25009457 (+)
gareml garem2 other downstream 4294 26265189 ~ 26283008 (+)
tfap2d tfap2d other downstream 152796 26413691 ~ 26431397 (+)
tfap2b tfap2b other downstream 177591 26438486 ~ 26452365 (+)
G187574 NA other downstream 422000 26682895 ~ 26685507 (+)
LOC120546586 dtnb other downstream 434535 26695430 ~ 26737803 (+)

Expression


Co-expression Network