G187535



Basic Information


Item Value
gene id G187535
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 26315122 ~ 26315654 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU254063
tgccagCTATGCAGCGAGCTAAACACAATCAAGTTTGAAGCCAAGAGTTGGCCTTTAACCTCTTTAGTGAAAGCAATTGTAAAACCTTTTGGATTTCAAATTCTATGACTCTTATTGAATAAATTAGTAGCCTACAGTAACTCAAATTTACCGGTAGTTACGTTGTCTCTGATGCAAGTATCACAGGTGAAAGAACAACATTAAAGCAACAGTACAGCATTGTGGGAGATAAGCTTATGTCCTTCCTTGCCATTTAGATCAGACGATCAACACCTCTCTCATACAGTCAATATAAAGTCACCAGAATAAAGCCTGGAAAAGGTAACAGAAGCCACCTCTAAAGCCACAATTAACAccttatatcttgtttgtttaatgagcacaCAATTAGAAGTGTACAAAACACAAGGTACGATTTTATATGGAGTTATGTGCTGAACTTTTTCTTGGCCGGGAGAAGTAACTTTTCCTTTaagtcccccccccaaaaaatttaCAACACAATGATTCGTCTTGTAAAAATACACTTAGTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU254063 True 533 lncRNA 0.37 1 26315122 26315654

Neighbor


gene id symbol gene type direction distance location
hadhb hadhb coding upstream 4407 26298326 ~ 26310715 (+)
esr2a LOC103368808 coding upstream 155686 26139409 ~ 26159436 (+)
jag2b jag2,LOC107377795 coding upstream 212724 26047472 ~ 26102398 (+)
knl1 NA coding upstream 322249 25970398 ~ 25992873 (+)
heca heca coding upstream 365712 25937301 ~ 25949410 (+)
map3k5 map3k5 coding downstream 201189 26516843 ~ 26596774 (+)
lrp11 lrp11,LOC102796877 coding downstream 281630 26597284 ~ 26604825 (+)
nup43 nup43 coding downstream 298116 26613770 ~ 26619262 (+)
lats1 lats1 coding downstream 304327 26619981 ~ 26628564 (+)
rab10 rab10,LOC102798439 coding downstream 317841 26633495 ~ 26652130 (+)
G187508 NA non-coding upstream 42527 26272368 ~ 26272595 (+)
LOC120547280 NA non-coding upstream 65437 26247778 ~ 26249685 (+)
G187431 NA non-coding upstream 347822 25967006 ~ 25967300 (+)
G187378 NA non-coding upstream 409720 25902938 ~ 25905402 (+)
G187310 NA non-coding upstream 788250 25526447 ~ 25526872 (+)
G187536 NA non-coding downstream 8862 26324516 ~ 26324734 (+)
LOC120546372 LOC103909865 non-coding downstream 563792 26879446 ~ 26885536 (+)
trnay-gua_55 NA non-coding downstream 563879 26879533 ~ 26879621 (+)
trnaa-agc_21 NA non-coding downstream 564507 26880161 ~ 26880233 (+)
trnaa-agc_22 NA non-coding downstream 571480 26887134 ~ 26887206 (+)
gareml garem2 other upstream 32114 26265189 ~ 26283008 (+)
atp5mj NA other upstream 54227 26257475 ~ 26260895 (+)
nudt14 nudt14,LOC107560374 other upstream 278890 26006854 ~ 26036232 (+)
LOC120546493 NA other upstream 346197 25955250 ~ 25968925 (+)
abracl abracl,LOC103376263 other upstream 379851 25929576 ~ 25935271 (+)
tfap2d tfap2d other downstream 98037 26413691 ~ 26431397 (+)
tfap2b tfap2b other downstream 122832 26438486 ~ 26452365 (+)
G187574 NA other downstream 367241 26682895 ~ 26685507 (+)
LOC120546586 dtnb other downstream 379776 26695430 ~ 26737803 (+)
LOC120546215 LOC104930085 other downstream 712451 27028105 ~ 27038228 (+)

Expression



Co-expression Network