G187774 (trim67,LOC102787511)


Basic Information

Item Value
gene id G187774
gene name trim67,LOC102787511
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 27529074 ~ 27529765 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU254368
GCCGCACCTACTCCTGCCGCGTGGTTCGGCGGCGGCGGCACCAGGCGGTGCTTGGCGAGCGGACCGCGGGACGGGTGGCACCGCTGCTGGCAGGCGTTACAGTAGAAGACGTCGCACTGCTCGCACATCACCGCCGCGTCCACCGGGTTGCGGTCGCACAGTTGGCACTTCACCGcggtagaagaagaagatgcgGATGCGCGGCGGTTCTGCTGGTACCGCGACACGATGGACTCTAGCAGCCGGTTCCGAGGGAAACCCCGGAGACCCCGCTCATCCAGGGAGACGCTCCGGTGGCACAGCGGGCAGGTGAGGGAGCAGTGTCGGGGGTGGTTGGCCGGCGGAAACACCCGCACCCCGTTTGGAGACTTGAGCTGGCACGGCGTGTAGGAGCCGTATCCGCTGTCCGTCTCGCTGTACAGACTCATCTTGTCCATGTCCAGGTAGTCGTAGTCGGAGCTGCCCGAGGCTCGGCTCTGCACCGGGGTCTCTCCCTCCGGGGTCTGGACGGTGATGTTCCGAGCACAGGCCAGGCAGACATTGTGGGAGCACGGCAGCAGGATGGGGTCCTTGAAGAGAGAACCGCAAACGGGGCATTTTAACTCTTCCTCCATCGCTCCCGTCTGTTTCTGTGGACCGGGGGGGAGAGAAGCAGCTTCAATGAAAACACTCCAGCACCGACTGACACGGAC

Function

symbol description
trim67 Predicted to enable zinc ion binding activity. Predicted to be involved in regulation of cellular protein localization. Predicted to act upstream of or within negative regulation of Ras protein signal transduction; positive regulation of neuron projection development; and positive regulation of ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and cytoskeleton.

NR:

description
tripartite motif-containing protein 67

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254368 True 692 lncRNA 0.65 1 27529074 27529765

Neighbor

gene id symbol gene type direction distance location
c18h1orf131 NA coding upstream 50999 27473216 ~ 27478075 (+)
LOC120547023 LOC103357708,LOC100700775,LOC101482519,LOC105938917,LOC107377760 coding upstream 121715 27072970 ~ 27407359 (+)
trnat-cgu_2 NA coding upstream 547281 26981721 ~ 26981793 (+)
esco2 NA coding upstream 623831 26896380 ~ 26905243 (+)
tmem214 tmem214 coding upstream 650496 26860070 ~ 26878578 (+)
LOC120547108 NA coding downstream 19669 27549434 ~ 27553027 (+)
sprtn NA coding downstream 23346 27553111 ~ 27558019 (+)
fam89a fam89a,LOC104954304 coding downstream 35211 27564976 ~ 27569270 (+)
ttc13 ttc13 coding downstream 62745 27592510 ~ 27617141 (+)
selenol NA coding downstream 90366 27620131 ~ 27626987 (+)
G187773 NA non-coding upstream 22487 27506306 ~ 27506587 (+)
G187772 NA non-coding upstream 24087 27504606 ~ 27504987 (+)
G187770 NA non-coding upstream 41652 27487164 ~ 27487422 (+)
G187738 NA non-coding upstream 132097 27396693 ~ 27396977 (+)
G187737 NA non-coding upstream 175426 27353404 ~ 27353648 (+)
G187779 NA non-coding downstream 2412 27532177 ~ 27575713 (+)
G187785 NA non-coding downstream 33417 27563182 ~ 27642373 (+)
G187803 NA non-coding downstream 130600 27660365 ~ 27660657 (+)
G187861 NA non-coding downstream 258620 27788385 ~ 27788602 (+)
G187872 NA non-coding downstream 354953 27884718 ~ 27981023 (+)
LOC120546215 LOC104930085 other upstream 490846 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 791271 26695430 ~ 26737803 (+)
G187574 NA other upstream 843567 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 1076709 26438486 ~ 26452365 (+)
tfap2d tfap2d other upstream 1097677 26413691 ~ 26431397 (+)
afdna afdn,LOC102779179 other downstream 1009635 28539400 ~ 28649123 (+)
ttll2 ttll2 other downstream 1342921 28872686 ~ 28883121 (+)
G188063 NA other downstream 1356725 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 1581193 29110958 ~ 29132700 (+)
G188167 ucn other downstream 1604406 29134171 ~ 29136917 (+)

Expression


Co-expression Network