G188057


Basic Information

Item Value
gene id G188057
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 28878748 ~ 28880435 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU254731
tatgacaagttgacattaatcaaagtgacattaccagaagttgtcttggtcatgacaagttgacattacatttgtttgggatgtctttgtaatgacaacttgacattaaccaggatgacattaccagagaatgtctttgtcatgacaacttgacataatgtcatcctgttcaatgtcaagttgtcataatcaagagaacccaaacaatgtcaacttgtcatgacaaaaaccgaatgacacttaatgacagaagtcataaatgtttgacttgtttataacccgttcatgacagtgtcatgtcacgattatgtcgatacattcaagtaaagtgttaccaaatatcCTTCTGTTGAAAGTCAATCGGTTTTATAATTAATTTGTCAGCGTTTGAAGTactgcttaaaggggtgatagaatgattatatagggtatttcacactgttccttatggtctcctaataggatatttaacattggttgggctgaaaatggcctggttgatatttgttttggcccttatgcatccctgtgttttggccctatttggaacgacagctttaattccaaatatggtatgctcatgaatatttagatgagctgcgcgctggcTGATGAGGAACcatcatacacatacacaatacattggagacgatacagcaggtctcatatttcaaacacacacactgctgccctgcgcacagtgcacacacacaaacacagactcacTGTCTGTTACATGCCCAGACATGCCCAGGCGAGAGCCGCAGCGGCTAAAACagccgagacaaaataaaaaagtttcgacactttcattataactagtgttgttctaacgttactcttgcgacataaaaaaaaacctccaccaGAGAATCCCAACTCAACTCGTACCTAGTAAGCGcggggagaggagagtgaaaccctgcaagcctgtcctctgccagtgcctctgcagcgctgtgttagatccacaactccctctcgtccgatatactcgttctgaacccttttctctgggccagtaggctCTTCCGTTGTACAGTCtagaacactgcatttacgaccgtagttcattttcaatatccttgcaaaacctccaaactttcttcttttctaaagtacacAGCGCAGCTCGTGTGGgagatcctgacagagctccagctcagcgggtctgtgaagggggagaggccgaCTGGGAAGGCAGCAAACCCGGCCAGCAGCTGCCACCTGTCtcggcagattgtggagctcttaaagtccgacacgtctaatttccaattagccatcaattttcataaaacggcccatatttgagctttacatagttgatttatagcataaaaaaagtctcagaagtgaattttgtaatggaatagcagagatctgcacgacctagatttagaagactaactgacctcagatcagttagtggcctagtatgtaaattttggggcgttacaaagatagaaggttgAGCCACATGAGAAGGATTTGGgatgttgacgtcaacttccagctttgttgagattcgccagttttcagaggcagtttcaaatagtgagatttgcagaggaaagaggtgtcattgggatttagaggttctatgtatgtcctagttaccctccaaactgtcgttattcaactatgacagggtaaaatcggttttgcattctatcacccctttaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254731 True 1688 lncRNA 0.42 1 28878748 28880435

Neighbor

gene id symbol gene type direction distance location
LOC120547119 NA coding upstream 6145 28866213 ~ 28872603 (+)
plg plg coding upstream 91930 28773325 ~ 28786818 (+)
vgll2a vgll2,LOC102778318 coding upstream 130556 28741168 ~ 28748192 (+)
rfx6 rfx6,LOC102778618,LOC102305591,LOC102193265 coding upstream 189157 28669262 ~ 28689591 (+)
ncoa1 ncoa1 coding upstream 411875 28393107 ~ 28466873 (+)
gpr31 NA coding downstream 21941 28902376 ~ 28906380 (+)
LOC120547117 gpr31,LOC104934219,LOC104957175 coding downstream 36856 28917291 ~ 28924763 (+)
slc30a2 slc30a3,LOC102796772 coding downstream 315734 29196169 ~ 29220727 (+)
LOC120546480 NA coding downstream 435324 29315759 ~ 29371150 (+)
LOC120546866 LOC103363081,LOC108247050,LOC101159876,LOC107104461 coding downstream 980939 29861374 ~ 29875824 (+)
trnal-cag_2 NA non-coding upstream 226064 28652602 ~ 28652684 (+)
G187918 NA non-coding upstream 333233 28472115 ~ 28545515 (+)
LOC120546306 NA non-coding upstream 374357 28500729 ~ 28504391 (+)
G187915 NA non-coding upstream 458486 28419992 ~ 28420262 (+)
G187906 NA non-coding upstream 501108 28365238 ~ 28377640 (+)
G188069 NA non-coding downstream 33967 28914402 ~ 28914798 (+)
G188091 NA non-coding downstream 50623 28931058 ~ 28944726 (+)
G188097 NA non-coding downstream 93164 28973599 ~ 28973911 (+)
G188100 NA non-coding downstream 96535 28976970 ~ 28977625 (+)
G188101 NA non-coding downstream 98520 28978955 ~ 28981624 (+)
afdna afdn,LOC102779179 other upstream 229625 28539400 ~ 28649123 (+)
LOC120546215 LOC104930085 other upstream 1840520 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 2140945 26695430 ~ 26737803 (+)
G187574 NA other upstream 2193241 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 2426383 26438486 ~ 26452365 (+)
G188063 NA other downstream 6055 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 230523 29110958 ~ 29132700 (+)
G188167 ucn other downstream 253736 29134171 ~ 29136917 (+)
si:ch211-245h14.1 NA other downstream 412270 29292705 ~ 29312364 (+)
G188207 clvs2,LOC107675107 other downstream 538941 29419376 ~ 29420727 (+)

Expression


Co-expression Network