G188101


Basic Information

Item Value
gene id G188101
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 28978955 ~ 28981624 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU254780
CCTGGAAATCAACACCGAACCCTGTAAGACAGCCTCTAGTGGACACATTGAAGACACACAACTCTCAGCTTAAAAATGACTAAATACACAAGTGCATTTCGATATCCCCAACATggctttctttaataaaaatGGCAGATTTCTGGGCTGTTTTGTATATCTGGGAGGAGCTTGATGCAGTACTACTAATaaccactagatggtgctccAGAAAAGGATATCACAATAAGTGGccattcctttttaaaaaagtcCCAATTTCTCTCAAAATACACAGTGCATGATATATAAGAAATGTGGGTCTTGGCAGTAAAATTGATCTTCATCTAACGTGTCTTGGAGATTTTGAGAATACAATTAAGACGATGTTAAGTCTTaaagagacattttttttgtagtactttaagtacaattttgatgTACTTTATACttccactccactacatttcacatgaaatattgtacattttactgcactacatttatctgaccgATTTAGTTACtgcagattaaaatgtttcacaGAAAACCTATAATGTGTTTCTAAAATGACATTATTATTGGTTGAACTACCAAAtagtaacataaaaacatgatggtAAATTAGCTTCACCTCGACCAGCTACTCAAATGAATAGTAGCCTAATGTTGTAGTAATAATAACTGGATGATAGTAGGCCTATAATACGGTAGCATTACTATGAGAACTTTTAATTGAGAAttaagtgctttttttttgctaatACTTGCTACTTTTAAGAGTTTAATCCCAAAGGGAAATTGCAGAAGACATTGCAGAAACATTACTGGTTGGCTGATAGACCGATAAATAAACAATGTCACGTAGTTTCAGACAGTAATATCTAATACTTTCATGAATGTAGaacaaaaacatgatgtatgggaatgggaattactggaattgttggggctttgtaaattatagagtgtggtctagacctactctatctgtaaagtgtctggagataacttgttatgatttgatactataaataaaattgaaaattgaaaattaaaataaatgttgtccTAGTTTGTGATGTGAAGCTCTTCCGCTGCGATCCCTAAAGCGTCAGTGTAACTGGCTGTTACCATTTAGCAATCAAGTCACCATCATTCTGGTCCTccatttattctttattctcACCACCAAAGAACTCCAATAAAATGCATCTGTCCTACTCAACAACATCAAACGTTGCTTCCTTCTCACGGCCTTCATCACTCTTCTCCATCACCACCGTTGTTTCTGCTCGCTTGGATCTGACTTGCATCAACCCTCCTCGCCTAAATCACAAGAAATCCCCTCTTATGTGTAGGGACGTCCTCTCTGATACATCTGGACTTTCAGATTGAAAGATAAGTTAGAAGTAATGATggagtggccgggttggctcagtgggtagagcaggcgcacatgtgctgagaggtttatgcctcaatgcagaggtccagggttcgaatatGACCTGTAATGAATTAGtgcatgtctccccccccctctctcccttttctcacctagctgtcctgtcaaaaattaaaggcagaaaagccccaaaaaaaacaaaaaaaaaagggtatgaGCATGGCTAGACCTTTCAAAAACATTCAACAATAATTCAatcagataaataaaatgttcaaaatgaCAGTTGAGTAAAGGCAATATGGAAAATATTAAAGAGAATACAGTAGGAAGATTGTTCTAAGGAGCcgaaaaaaattagaaaaacagGAGGATTAAAACTTTAGTGtgtaacattttgatattattgaacatccgttacattcaagccgttgccaaatgagttgctacaaagctaattaagactctcagctccacacaactctctctggatctctcagtaggactatggtCAGAAGATTGGGGCGTCCGGCGACTATCGCACGCAGAAAATCGAGTGATAAGGAAGATAacgacctcttctgaagagtctgtcatgtttttttaatcctccttggctactagcagctgcgtggaggaggggtgtcCACATGAttcaagccttccgtgatcatgCACgtgccaacagtgttgttgtcattacttagaattcctcatgggggcgacaggaTAAATTGTCAGCTTTCCCCGGTCGGGAAACAAGCCCATGATTTACCAAACTGTTAATTCACATGAATTATTATGGGTTTGATatgcagagagagacaacaaATACTCCtaactgattataataataaaagttgacttaaaaacatatttatgaCCTGAACTTGTCTCAAGTACaatgcacatactgtattttggaATATAGAATAAAACATTGACCTCTCAGGATTCCCTGAAATCACTttcttgctaaaaaaaaaaccaacaacctGTATTTTAGTATGTTCTCTTGTGACAAAGGTCTCAACATGTCTGCAGGAATGTTAATGTGAATATTAAACACTCACACGTGGGCTGACTTCAGTAAACGGTCTATTCGAGGCAGAGCAGTGCAGGTGAGTAGGAGACATGGAGCCGGCAGCATTATCACCTTCTAATGCATtttccacaaacacacaggcttTTATATTGTTTGCTGATGTACAAGTAACCTCTGCTGGGGAAGGA

Function

GO: NA

KEGG:

id description
ko05110 Vibrio cholerae infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU254780 True 2620 lncRNA 0.38 2 28978955 28981624

Neighbor

gene id symbol gene type direction distance location
LOC120547117 gpr31,LOC104934219,LOC104957175 coding upstream 54192 28917291 ~ 28924763 (+)
gpr31 NA coding upstream 72575 28902376 ~ 28906380 (+)
LOC120547119 NA coding upstream 106352 28866213 ~ 28872603 (+)
plg plg coding upstream 192137 28773325 ~ 28786818 (+)
vgll2a vgll2,LOC102778318 coding upstream 230763 28741168 ~ 28748192 (+)
slc30a2 slc30a3,LOC102796772 coding downstream 214545 29196169 ~ 29220727 (+)
LOC120546480 NA coding downstream 334135 29315759 ~ 29371150 (+)
LOC120546866 LOC103363081,LOC108247050,LOC101159876,LOC107104461 coding downstream 879750 29861374 ~ 29875824 (+)
LOC120546867 NA coding downstream 895297 29876921 ~ 29882724 (+)
LOC120546870 NA coding downstream 913801 29895425 ~ 29943833 (+)
G188100 NA non-coding upstream 1330 28976970 ~ 28977625 (+)
G188097 NA non-coding upstream 5044 28973599 ~ 28973911 (+)
G188091 NA non-coding upstream 34229 28931058 ~ 28944726 (+)
G188069 NA non-coding upstream 64157 28914402 ~ 28914798 (+)
G188057 NA non-coding upstream 98520 28878748 ~ 28880435 (+)
G188104 NA non-coding downstream 2020 28983644 ~ 28983880 (+)
G188122 NA non-coding downstream 62659 29044283 ~ 29045546 (+)
G188168 NA non-coding downstream 156449 29138073 ~ 29143547 (+)
G188172 NA non-coding downstream 175681 29157305 ~ 29161893 (+)
G188206 clvs2,LOC101073081 non-coding downstream 402586 29384210 ~ 29384442 (+)
G188063 NA other upstream 87591 28886490 ~ 28891364 (+)
ttll2 ttll2 other upstream 95834 28872686 ~ 28883121 (+)
afdna afdn,LOC102779179 other upstream 329832 28539400 ~ 28649123 (+)
LOC120546215 LOC104930085 other upstream 1940727 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 2241152 26695430 ~ 26737803 (+)
trim54 trim54,LOC103375614 other downstream 129334 29110958 ~ 29132700 (+)
G188167 ucn other downstream 152547 29134171 ~ 29136917 (+)
si:ch211-245h14.1 NA other downstream 311081 29292705 ~ 29312364 (+)
G188207 clvs2,LOC107675107 other downstream 437752 29419376 ~ 29420727 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other downstream 480225 29461849 ~ 29463874 (+)

Expression


Co-expression Network