si:ch211-245h14.1


Basic Information

Item Value
gene id si:ch211-245h14.1
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 29292705 ~ 29312364 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU254892
GTCAAAGCAAAAGTGAAAGTGCTCCGCTGACAGGGAGGagctgctgttgtttttctggCACTCGTAAGACGGAAATGCCAGAGATATTACCAAGAAATTATCAATCTATTTCGTAAGTAAGACtcttaaaaaaggttttgaataATCTGTGCGAGGCTGTGAACTGCTGAATCCCTACCATGCAGATAAATTCAGGTTATCAACCTCTAAGAAACATGGACAAGGCAGAGACGACTGTGCCGGGGAAAAACTTTTTTGTCTTCTTGGCGGGAAAAACTAATGATGCTCATCACGACTTTGTTGAAAAGTTTAAAGACGTTGGCCAAACTGAGGTGTGGTCTCCTGAAGAAAGTGACTACCTTCTGGTTTTCTGTCCCATCGCTTCACGAGTTGGAACGGACATCAGCGAGGCCCTGGACAAAATTCCAGGTGGTAAACCAGTAATTCTGGTGGTGATGCATCACACCTTCAGTCCTGACCATGTTGTAGCTCCAAGCATGAGACAGGTAAACAACCAAGCCGTCCTCCTCACCGT
>TU254896
GTCAAAGCAAAAGTGAAAGTGCTCCGCTGACAGGGAGGagctgctgttgtttttctggCACTCGTAAGACGGAAATGCCAGAGATATTACCAAGAAATTATCAATCTATTTCAAACATGGACAAGGCAGAGACGACTGTGCCGGGGAAAAACTTTTTTGTCTTCTTGGCGGGAAAAACTAATGATGCTCATCACGACTTTGTTGAAAAGTTTAAAGACGTTGGCCAAACTGAGGTGTGGTCTCCTGAAGAAAGTGACTACCTTCTGGTTTTCTGTCCCATCGCTTCACGAGTTGGAACGGACATCAGCGAGGCCCTGGACAAAATTCCAGGTGGTAAACCAGTAATTCTGGTGGTGATGCATCACACCTTCAGTCCTGACCATGTTGTAGCTCCAAGCATGAGACAGGTAAACAACCAAGCCGTCCTCCTCACCGT
>XM_039782699.1
CTCATCTCTGCTCATTCTCTTGAGAGCACGTTGCACGTCAAAGCAAAAGTGAAAGTGCTCCGCTGACAGGGAGGagctgctgttgtttttctggCACTCGTAAGACGGAAATGCCAGAGATATTACCAAGAAATTATCAATCTATTTCAAACATGGACAAGGCAGAGACGACTGTGCCGGGGAAAAACTTTTTTGTCTTCTTGGCGGGAAAAACTAATGATGCTCATCACGACTTTGTTGAAAAGTTTAAAGACGTTGGCCAAACTGAGGTGTGGTCTCCTGAAGAAAGTGACTACCTTCTGGTTTTCTGTCCCATCGCTTCACGAGTTGGAACGGACATCAGCGAGGCCCTGGACAAAATTCCAGGTGGTAAACCAGTAATTCTGGTGGTGATGCATCACACCTTCAGTCCTGAACATGTTGTAGCTCCAAGCATGAGACAGGTGAACAAACCGGCCGTCCTCCTCACCGTGGACTGTCTGTTCTATGAGCGCAACCTCCTGAAGTGTAACCGCAATGACATCGCGTGGTTTGACGTCCAGAAGGTTCTGGGAATTCCCCCACAGccCTCTTCCTTGAAAACATACCTCGGAAGTTGGTGGAGGAAGACCCGGAGCCTTGTTGGAATAGCAGggtggaggaagtactggaAGCCTGTTGTTATATTGGTGGTGATCATTAGGCTTGTGATCTATTTTGAGGAGATAAAGAAGTAAAGTGTATGAGGCCTGTCAAAAGCAtgcattacaaaaacaaaaggaatcCACTGTAATGGCAGTTTGCAGTATTATCACAATAAATGATTCTCGAAGGGACAAAATAAATATGCCATAGAATGCATGTGCAATcatttatataaatgtaataacagAAGAATGGtatcattgttattattgtaGTATAGTTGGGAAGGCTGATATAGATGTTTTTAAGCTGAATCTTTAGATCTCTTAGGCTGGCACAATATCATATATTGAGAATGTAAATCAGGGGCTACTACCAATGTTACTTCACAACCCCATTTATTGTGCTTTTTAGATCCAAGTTTTGTGGCATgtacatgttttaaatgtgtgtgtagcagAGTAGTATGTGGTCAAATCATATCATGTTTTGAATGATGATGACATAACATCCCTGCACAATGATTGCTGTTGTGTGCTCATTAAATATCAGGATTATATGTTTTTCTGTCATAAATCAATAAGTAAAAATGAATCAGCCAAA
>XM_039782700.1
AAAAGTGAAAGTGCTCCGCTGACAGGGAGGagctgctgttgtttttctggCACTCGTAAGACGGAAATGCCAGAGATATTACCAAGAAATTATCAATCTATTTCGTAAGTAAGACtcttaaaaaaggttttgaataATCTGTGCGAGGCTGTGAACTGCTGAATCCCTACCATGCAGATAAATTCAGGTTATCAACCTCTAAGAAACATGGACAAGGCAGAGACGACTGTGCCGGGGAAAAACTTTTTTGTCTTCTTGGCGGGAAAAACTAATGATGCTCATCACGACTTTGTTGAAAAGTTTAAAGACGTTGGCCAAACTGAGGTGTGGTCTCCTGAAGAAAGTGACTACCTTCTGGTTTTCTGTCCCATCGCTTCACGAGTTGGAACGGACATCAGCGAGGCCCTGGACAAAATTCCAGGTGGTAAACCAGTAATTCTGGTGGTGATGCATCACACCTTCAGTCCTGAACATGTTGTAGCTCCAAGCATGAGACAGGTGAACAAACCGGCCGTCCTCCTCACCGTGGACTGTCTGTTCTATGAGCGCAACCTCCTGAAGTGTAACCGCAATGACATCGCGTGGTTTGACGTCCAGAAGGTTCTGGGAATTCCCCCACAGccCTCTTCCTTGAAAACATACCTCGGAAGTTGGTGGAGGAAGACCCGGAGCCTTGTTGGAATAGCAGggtggaggaagtactggaAGCCTGTTGTTATATTGGTGGTGATCATTAGGCTTGTGATCTATTTTGAGGAGATAAAGAAGTAAAGTGTATGAGGCCTGTCAAAAGCAtgcattacaaaaacaaaaggaatcCACTGTAATGGCAGTTTGCAGTATTATCACAATAAATGATTCTCGAAGGGACAAAATAAATATGCCATAGAATGCATGTGCAATcatttatataaatgtaataacagAAGAATGGtatcattgttattattgtaGTATAGTTGGGAAGGCTGATATAGATGTTTTTAAGCTGAATCTTTAGATCTCTTAGGCTGGCACAATATCATATATTGAGAATGTAAATCAGGGGCTACTACCAATGTTACTTCACAACCCCATTTATTGTGCTTTTTAGATCCAAGTTTTGTGGCATgtacatgttttaaatgtgtgtgtagcagAGTAGTATGTGGTCAAATCATATCATGTTTTGAATGATGATGACATAACATCCCTGCACAATGATTGCTGTTGTGTGCTCATTAAATATCAGGATTATATGTTTTTCTGTCATAAATCAATAAGTAAAAATGAATCAGCCAAA
>XM_039782701.1
CTCATCTCTGCTCATTCTCTTGAGAGCACGTTGCACGTCAAAGCAAAAGTGAAAGTGCTCCGCTGACAGGGAGGagctgctgttgtttttctggCACTCGTAAGACGGAAATGCCAGAGATATTACCAAGAAATTATCAATCTATTTCAAACATGGACAAGGCAGAGACGACTGTGCCGGGGAAAAACTTTTTTGTCTTCTTGGCGGGAAAAACTAATGATGCTCATCACGACTTTGTTGAAAAGTTTAAAGACGTTGGCCAAACTGAGGTGTGGTCTCCTGAAGAAAGTGACTACCTTCTGGTTTTCTGTCCCATCGCTTCACGAGTTGGAACGGACATCAGCGAGGCCCTGGACAAAATTCCAGGTGGTAAACCAGTAATTCTGGTGGTGATGCATCACACCTTCAGTCCTGAACATGTTGTAGCTCCAAGCATGAGACAGGTGAACAAACCGGCCGTCCTCCTCACCGTGGACTGTCTGTTCTATGAGCGCAACCTCCTGAAGTGTAACCGCAATGACATCGCGTGGTTTGACGTCCAGAAGGTTCTGGGAATTCCCCCACAGccCTCTTCCTTGAAAACATACCTCGGAAGTTGGTGGAGGAAGACCCGGAGCCTTGTTGGAATAGCAGGTGTTATATTGGTGGTGATCATTGTGACTGTGATATGTgttgaaaagagaaagaagtaaGggtggaggaagtactggaAGCCTGTTGTTATATTGGTGGTGATCATTAGGCTTGTGATCTATTTTGAGGAGATAAAGAAGTAAAGTGTATGAGGCCTGTCAAAAGCAtgcattacaaaaacaaaaggaatcCACTGTAATGGCAGTTTGCAGTATTATCACAATAAATGATTCTCGAAGGGACAAAATAAATATGCCATAGAATGCATGTGCAATcatttatataaatgtaataacagAAGAATGGtatcattgttattattgtaGTATAGTTGGGAAGGCTGATATAGATGTTTTTAAGCTGAATCTTTAGATCTCTTAGGCTGGCACAATATCATATATTGAGAATGTAAATCAGGGGCTACTACCAATGTTACTTCACAACCCCATTTATTGTGCTTTTTAGATCCAAGTTTTGTGGCATgtacatgttttaaatgtgtgtgtagcagAGTAGTATGTGGTCAAATCATATCATGTTTTGAATGATGATGACATAACATCCCTGCACAATGATTGCTGTTGTGTGCTCATTAAATATCAGGATTATATGTTTTTCTGTCATAAATCAATAAGTAAAAATGAATCAGCCAAA
>XM_039782702.1
CTCATCTCTGCTCATTCTCTTGAGAGCACGTTGCACGTCAAAGCAAAAGTGAAAGTGCTCCGCTGACAGGGAGGagctgctgttgtttttctggCACTCGTAAGACGGAAATGCCAGAGATATTACCAAGAAATTATCAATCTATTTCAAACATGGACAAGGCAGAGACGACTGTGCCGGGGAAAAACTTTTTTGTCTTCTTGGCGGGAAAAACTAATGATGCTCATCACGACTTTGTTGAAAAGTTTAAAGACGTTGGCCAAACTGAGGTGTGGTCTCCTGAAGAAAGTGACTACCTTCTGGTTTTCTGTCCCATCGCTTCACGAGTTGGAACGGACATCAGCGAGGCCCTGGACAAAATTCCAGGTGGTAAACCAGTAATTCTGGTGGTGATGCATCACACCTTCAGTCCTGAACATGTTGTAGCTCCAAGCATGAGACAGGTGAACAAACCGGCCGTCCTCCTCACCGTGGACTGTCTGTTCTATGAGCGCAACCTCCTGAAGTGTAACCGCAATGACATCGCGTGGTTTGACGTCCAGAAGGTTCTGGGAATTCCCCCACAGccCTCTTCCTTGAAAACATACCTCGGAAGTTggtggaggaagtactggaAGCCTGTTGTTATATTGGTGGTGATCATTAGGCTTGTGATCTATTTTGAGGAGATAAAGAAGTAAAGTGTATGAGGCCTGTCAAAAGCAtgcattacaaaaacaaaaggaatcCACTGTAATGGCAGTTTGCAGTATTATCACAATAAATGATTCTCGAAGGGACAAAATAAATATGCCATAGAATGCATGTGCAATcatttatataaatgtaataacagAAGAATGGtatcattgttattattgtaGTATAGTTGGGAAGGCTGATATAGATGTTTTTAAGCTGAATCTTTAGATCTCTTAGGCTGGCACAATATCATATATTGAGAATGTAAATCAGGGGCTACTACCAATGTTACTTCACAACCCCATTTATTGTGCTTTTTAGATCCAAGTTTTGTGGCATgtacatgttttaaatgtgtgtgtagcagAGTAGTATGTGGTCAAATCATATCATGTTTTGAATGATGATGACATAACATCCCTGCACAATGATTGCTGTTGTGTGCTCATTAAATATCAGGATTATATGTTTTTCTGTCATAAATCAATAAGTAAAAATGAATCAGCCAAA

Function

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
TU254892 False 535 TUCP 0.45 4 29292741 29312364
TU254896 False 436 TUCP 0.47 4 29292741 29312364
XM_039782699.1 False 1227 mRNA 0.41 7 29292705 29304940
XM_039782700.1 False 1282 mRNA 0.41 7 29292749 29304940
XM_039782701.1 True 1287 mRNA 0.41 7 29292705 29304940
XM_039782702.1 False 1191 mRNA 0.41 6 29292705 29304940

Neighbor

gene id symbol gene type direction distance location
slc30a2 slc30a3,LOC102796772 coding upstream 71978 29196169 ~ 29220727 (+)
LOC120547117 gpr31,LOC104934219,LOC104957175 coding upstream 367942 28917291 ~ 28924763 (+)
gpr31 NA coding upstream 386325 28902376 ~ 28906380 (+)
LOC120547119 NA coding upstream 420102 28866213 ~ 28872603 (+)
plg plg coding upstream 505887 28773325 ~ 28786818 (+)
LOC120546480 NA coding downstream 3395 29315759 ~ 29371150 (+)
LOC120546866 LOC103363081,LOC108247050,LOC101159876,LOC107104461 coding downstream 549010 29861374 ~ 29875824 (+)
LOC120546867 NA coding downstream 564557 29876921 ~ 29882724 (+)
LOC120546870 NA coding downstream 583061 29895425 ~ 29943833 (+)
LOC120546436 NA coding downstream 699791 30012155 ~ 30022642 (+)
G188172 NA non-coding upstream 130812 29157305 ~ 29161893 (+)
G188168 NA non-coding upstream 149158 29138073 ~ 29143547 (+)
G188122 NA non-coding upstream 247159 29044283 ~ 29045546 (+)
G188104 NA non-coding upstream 308825 28983644 ~ 28983880 (+)
G188101 NA non-coding upstream 311081 28978955 ~ 28981624 (+)
G188206 clvs2,LOC101073081 non-coding downstream 71846 29384210 ~ 29384442 (+)
G188208 NA non-coding downstream 115061 29427425 ~ 29428647 (+)
G188177 smpdl3a non-coding downstream 130983 29443347 ~ 29447023 (+)
G188281 NA non-coding downstream 225811 29538175 ~ 29538452 (+)
G188288 NA non-coding downstream 263860 29576224 ~ 29578102 (+)
G188167 ucn other upstream 155788 29134171 ~ 29136917 (+)
trim54 trim54,LOC103375614 other upstream 160005 29110958 ~ 29132700 (+)
G188063 NA other upstream 401341 28886490 ~ 28891364 (+)
ttll2 ttll2 other upstream 409584 28872686 ~ 28883121 (+)
afdna afdn,LOC102779179 other upstream 643582 28539400 ~ 28649123 (+)
G188207 clvs2,LOC107675107 other downstream 107012 29419376 ~ 29420727 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other downstream 149485 29461849 ~ 29463874 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other downstream 332890 29645254 ~ 29645823 (+)
btbd9 btbd9 other downstream 772184 30084548 ~ 30097239 (+)
angel2 NA other downstream 1012608 30324972 ~ 30336202 (+)

Expression


Co-expression Network