G188288


Basic Information

Item Value
gene id G188288
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 29576224 ~ 29578102 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU255005
GCGAGATCAAGAACTGACGCAGAGTTTGCCCTGTCTCATTTGTTTCTCCTGTTTACCGAGAGAGCATATAAGCTGTTTGCGTGGTGCCAGCCGGTACCTGTAACACTAcaacgtcagaataagaaaaagaggcttgcctgggccaagaaacattgtcaatgaactactgaagactggaagaaggtgctatggactgatgaattgAAATTTTAAATCTTCGGTtaatcacgcaggatttttgtacgccgtcgagtaggcgaaaggatggttcctcagtgtgtgacatcaactgtcaaacatggaggagaaaGAGTGAttgtctggggctgttttgctggatccagggtcagtgatttgtacagagtgaaaggcaccctgaaccaaaacggctaccacacaGTGTTCGAATTACGTGGGAGCCagagggagccgagctcccataGAGTGAGGACTGGCTCCCATGAAAGCACCCCATGTCAAAAATCTGAGGGGGTCTCTCATATCTGAAGGTGTCTGCCATATGTGGCATTGTAATTTAATCTTAATCAACGCTCATTATCCATCCCTGTGCGATCTCTTACCATTAAAgacgttaaattaaaatacaggcTACTACGGACGTAGACCTGAGCCTACCCTACGctcatgaacgcagcatgactGCACTTCACCACCATGCTTCACCACCACACCACCAGGCTACGTGAGCAAACCGCATACGATCGATTTCACAGCACTCGCAAGTCCGAAGAAGTGACCTTGCTTTTAGCTTAATGTGCTTTTGAGGTAAATAccaatacatataaatatcacTGTCAGTTATGCCACCGAAAAAAAGGTCACCTGCGCCGAATTCATTTTCGGCCCTGACAAGTTTCGGTTTTaccaccaaaaaacaaaaaaaagttgcagATTTAGAATCAGAAAATACCAAGTCATCccagagttgtgccttttgtcattagttttgttttcaataacttCGTAAACAGTGGAAGTAagccaacagctacatgcaaggtgtgtggcaccaagataaatgatgccggatcaacaacgtcggactttatcaggcatctcaaaacgcacctAAATAGGTCGGTCGCACGCTAATGtaaaagagacgttacatttagcatatatcgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255005 True 1146 lncRNA 0.45 2 29576224 29578102

Neighbor

gene id symbol gene type direction distance location
LOC120546480 NA coding upstream 205074 29315759 ~ 29371150 (+)
slc30a2 slc30a3,LOC102796772 coding upstream 355497 29196169 ~ 29220727 (+)
LOC120547117 gpr31,LOC104934219,LOC104957175 coding upstream 651461 28917291 ~ 28924763 (+)
gpr31 NA coding upstream 669844 28902376 ~ 28906380 (+)
LOC120547119 NA coding upstream 703621 28866213 ~ 28872603 (+)
LOC120546866 LOC103363081,LOC108247050,LOC101159876,LOC107104461 coding downstream 283272 29861374 ~ 29875824 (+)
LOC120546867 NA coding downstream 298819 29876921 ~ 29882724 (+)
LOC120546870 NA coding downstream 317323 29895425 ~ 29943833 (+)
LOC120546436 NA coding downstream 434053 30012155 ~ 30022642 (+)
LOC120546869 NA coding downstream 450848 30028950 ~ 30083063 (+)
G188281 NA non-coding upstream 37772 29538175 ~ 29538452 (+)
G188177 smpdl3a non-coding upstream 129201 29443347 ~ 29447023 (+)
G188208 NA non-coding upstream 147577 29427425 ~ 29428647 (+)
G188206 clvs2,LOC101073081 non-coding upstream 191782 29384210 ~ 29384442 (+)
G188172 NA non-coding upstream 414331 29157305 ~ 29161893 (+)
G188290 NA non-coding downstream 1533 29579635 ~ 29605099 (+)
LOC120546861 NA non-coding downstream 81154 29659256 ~ 29660735 (+)
LOC120546865 NA non-coding downstream 209859 29787961 ~ 29793679 (+)
LOC120546868 NA non-coding downstream 308762 29886864 ~ 29888884 (+)
G188321 NA non-coding downstream 350740 29928842 ~ 29985502 (+)
G188268 fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 other upstream 112350 29461849 ~ 29463874 (+)
G188207 clvs2,LOC107675107 other upstream 155497 29419376 ~ 29420727 (+)
si:ch211-245h14.1 NA other upstream 263860 29292705 ~ 29312364 (+)
G188167 ucn other upstream 439307 29134171 ~ 29136917 (+)
trim54 trim54,LOC103375614 other upstream 443524 29110958 ~ 29132700 (+)
G188296 LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 other downstream 67152 29645254 ~ 29645823 (+)
btbd9 btbd9 other downstream 506446 30084548 ~ 30097239 (+)
angel2 NA other downstream 746870 30324972 ~ 30336202 (+)
G188352 NA other downstream 1033579 30611681 ~ 30882446 (+)
LOC120546905 NA other downstream 1216117 30794219 ~ 30812452 (+)

Expression


Co-expression Network