G188960



Basic Information


Item Value
gene id G188960
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 32143116 ~ 32143380 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU256051
aggactactagccagtcagaagcagagcatgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagcatgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU256051 True 207 lncRNA 0.54 2 32143116 32143380

Neighbor


gene id symbol gene type direction distance location
crnkl1 crnkl1 coding upstream 37456 32093951 ~ 32105660 (+)
nkx2.4b nkx2-4,LOC103364681,LOC102215835,LOC102780891 coding upstream 258314 31881465 ~ 31884802 (+)
nkx2.2b NA coding upstream 273820 31866894 ~ 31869296 (+)
cebpz LOC104961443,LOC104960473 coding upstream 386198 31735570 ~ 31756918 (+)
LOC120547115 prkd3,LOC103372736 coding upstream 438753 31620408 ~ 31704363 (+)
senp6a NA coding downstream 392355 32535735 ~ 32569277 (+)
nt5e NA coding downstream 955989 33099369 ~ 33127591 (+)
bub1 NA coding downstream 1058025 33201405 ~ 33228839 (+)
LOC120546516 NA coding downstream 1087654 33231034 ~ 33238327 (+)
LOC120546153 LOC103369399 coding downstream 1136531 33279911 ~ 33286940 (+)
G188819 NA non-coding upstream 157030 31985312 ~ 31986086 (+)
G188818 NA non-coding upstream 174175 31968623 ~ 31968941 (+)
G188816 LOC106633344,LOC106098344,LOC106674933,LOC106456206,LOC108426271 non-coding upstream 190464 31947198 ~ 31952652 (+)
G188809 xrn2 non-coding upstream 215983 31918999 ~ 31927133 (+)
G188785 NA non-coding upstream 231817 31839806 ~ 31911299 (+)
G188971 NA non-coding downstream 58882 32202262 ~ 32202553 (+)
LOC120547295 NA non-coding downstream 85306 32228686 ~ 32229327 (+)
G188980 NA non-coding downstream 95103 32238483 ~ 32238824 (+)
G188987 LOC103366807 non-coding downstream 172920 32316300 ~ 32319175 (+)
G189011 NA non-coding downstream 298903 32442283 ~ 32442619 (+)
LOC120546196 LOC105017826 other upstream 361050 31776963 ~ 31782066 (+)
LOC120546816 NA other upstream 528594 31606054 ~ 31614522 (+)
hivep2a LOC103373864 other upstream 833720 31169067 ~ 31309396 (+)
G188352 NA other upstream 1260670 30611681 ~ 30882446 (+)
myo6a myo6,LOC103369425 other downstream 433076 32576456 ~ 32767003 (+)
mei4 NA other downstream 822458 32965838 ~ 33041169 (+)
pex7 pex7,LOC102797744 other downstream 1184712 33328092 ~ 33386989 (+)
LOC120546192 slc35d3,LOC102797457 other downstream 1256421 33399801 ~ 33416086 (+)
G189269 NA other downstream 1310616 33453996 ~ 33458768 (+)

Expression



Co-expression Network