G188987 (LOC103366807)


Basic Information

Item Value
gene id G188987
gene name LOC103366807
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 32316300 ~ 32319175 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU256084
GTCGATGGTGACGCCGGTCTCTGGCTTGTGATCTTTGTTAGACACCTGCCAGATGTCGAAGGCCTCGGTGGGCGAGTCGGGCAGGAGGCGGAGCATCAGGATGATGGTGTAGGCGTGGGGAAGACCGTCAGGGTGGACATCTCTCGTGGGCTGAGTCAGGAATGCGTTTTTGTGGAGTCGGTATGCTGTGTAGCTGTTGAAGGAGCCCGGCTCCATGGAGACACCTTTAACGTAGCCGTAGGTCTTCTCTGTCAGGTTGAACGCCTCGAGCATCC

Function

NR:

description
PREDICTED: collagen alpha-1(XII) chain-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256084 True 275 lncRNA 0.58 2 32316300 32319175

Neighbor

gene id symbol gene type direction distance location
cd109 NA coding upstream 170390 32111590 ~ 32145910 (+)
crnkl1 crnkl1 coding upstream 210640 32093951 ~ 32105660 (+)
nkx2.4b nkx2-4,LOC103364681,LOC102215835,LOC102780891 coding upstream 431498 31881465 ~ 31884802 (+)
nkx2.2b NA coding upstream 447004 31866894 ~ 31869296 (+)
cebpz LOC104961443,LOC104960473 coding upstream 559382 31735570 ~ 31756918 (+)
senp6a NA coding downstream 216560 32535735 ~ 32569277 (+)
nt5e NA coding downstream 780194 33099369 ~ 33127591 (+)
bub1 NA coding downstream 882230 33201405 ~ 33228839 (+)
LOC120546516 NA coding downstream 911859 33231034 ~ 33238327 (+)
LOC120546153 LOC103369399 coding downstream 960736 33279911 ~ 33286940 (+)
G188980 NA non-coding upstream 77476 32238483 ~ 32238824 (+)
LOC120547295 NA non-coding upstream 86973 32228686 ~ 32229327 (+)
G188971 NA non-coding upstream 113747 32202262 ~ 32202553 (+)
G188960 NA non-coding upstream 172920 32143116 ~ 32143380 (+)
G188819 NA non-coding upstream 330214 31985312 ~ 31986086 (+)
G189011 NA non-coding downstream 123108 32442283 ~ 32442619 (+)
G189012 NA non-coding downstream 124463 32443638 ~ 32447139 (+)
G189013 tmem30a,LOC104951461,LOC107377958,LOC103366810,LOC108228983,LOC107101491,LOC103381310 non-coding downstream 135523 32454698 ~ 32456243 (+)
G189020 NA non-coding downstream 158679 32477854 ~ 32478492 (+)
G189024 NA non-coding downstream 196180 32515355 ~ 32515647 (+)
LOC120546196 LOC105017826 other upstream 534234 31776963 ~ 31782066 (+)
LOC120546816 NA other upstream 701778 31606054 ~ 31614522 (+)
hivep2a LOC103373864 other upstream 1006904 31169067 ~ 31309396 (+)
G188352 NA other upstream 1433854 30611681 ~ 30882446 (+)
myo6a myo6,LOC103369425 other downstream 257281 32576456 ~ 32767003 (+)
mei4 NA other downstream 646663 32965838 ~ 33041169 (+)
pex7 pex7,LOC102797744 other downstream 1008917 33328092 ~ 33386989 (+)
LOC120546192 slc35d3,LOC102797457 other downstream 1080626 33399801 ~ 33416086 (+)
G189269 NA other downstream 1134821 33453996 ~ 33458768 (+)

Expression


Co-expression Network