LOC120547301


Basic Information

Item Value
gene id LOC120547301
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 32525522 ~ 32535227 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU256143
TAGCAGCTTTAGAGCTACAGCTACTCTGCCTCGGGTCACCGATGAGCAACACTATTATCTGAGGAGTATCATGGAATAAACATGGCCCACAATCGCAGATTTTTCTTTGAAGTGCGAGCGTGATGAGCACGGAGGAGATGGACCGGCAGCAGCCCACCTCCCCCGAGGAGAAAAAGTCTCCCACTCTTAGGCACTTCACTTCCTCTGATCCTTTGAGAA
>XR_005637046.1
GTGAGTTGGATTTGTGCGGTAACTTTTCCTTTGAGCAGTCTAGCAGCTTTAGAGCTACAGCTACTCTGCCTCGGGTCACCGATGAGCAACACTATTATCTGAGGAGTATCATGGAATAAACATGGCCCACAATCGCAGATTTTTCTTTGAAGTGCGAGCGTGATGAGCACGGAGGAGATGGACCGGCAGCAGCCCACCTCCCCCGAGGAGAAAAAGTCTCCCACTCTTAGGCACTTCACTTCCTCTGATCCTTTGAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256143 False 219 lncRNA 0.51 3 32525562 32535227
XR_005637046.1 True 259 lncRNA 0.50 3 32525522 32535227

Neighbor

gene id symbol gene type direction distance location
cd109 NA coding upstream 379612 32111590 ~ 32145910 (+)
crnkl1 crnkl1 coding upstream 419862 32093951 ~ 32105660 (+)
nkx2.4b nkx2-4,LOC103364681,LOC102215835,LOC102780891 coding upstream 640720 31881465 ~ 31884802 (+)
nkx2.2b NA coding upstream 656226 31866894 ~ 31869296 (+)
cebpz LOC104961443,LOC104960473 coding upstream 768604 31735570 ~ 31756918 (+)
senp6a NA coding downstream 508 32535735 ~ 32569277 (+)
nt5e NA coding downstream 564142 33099369 ~ 33127591 (+)
bub1 NA coding downstream 666178 33201405 ~ 33228839 (+)
LOC120546516 NA coding downstream 695807 33231034 ~ 33238327 (+)
LOC120546153 LOC103369399 coding downstream 744684 33279911 ~ 33286940 (+)
G189024 NA non-coding upstream 9875 32515355 ~ 32515647 (+)
G189020 NA non-coding upstream 47030 32477854 ~ 32478492 (+)
G189013 tmem30a,LOC104951461,LOC107377958,LOC103366810,LOC108228983,LOC107101491,LOC103381310 non-coding upstream 69279 32454698 ~ 32456243 (+)
G189012 NA non-coding upstream 78383 32443638 ~ 32447139 (+)
G189011 NA non-coding upstream 82903 32442283 ~ 32442619 (+)
G189027 NA non-coding downstream 28623 32563850 ~ 32570635 (+)
G189029 NA non-coding downstream 30305 32565532 ~ 32566361 (+)
G189035 NA non-coding downstream 114603 32649830 ~ 32650345 (+)
G189037 NA non-coding downstream 219363 32754590 ~ 32755953 (+)
G189034 NA non-coding downstream 223614 32758841 ~ 32761089 (+)
LOC120546196 LOC105017826 other upstream 743456 31776963 ~ 31782066 (+)
LOC120546816 NA other upstream 911000 31606054 ~ 31614522 (+)
hivep2a LOC103373864 other upstream 1216126 31169067 ~ 31309396 (+)
G188352 NA other upstream 1643076 30611681 ~ 30882446 (+)
myo6a myo6,LOC103369425 other downstream 41229 32576456 ~ 32767003 (+)
mei4 NA other downstream 430611 32965838 ~ 33041169 (+)
pex7 pex7,LOC102797744 other downstream 792865 33328092 ~ 33386989 (+)
LOC120546192 slc35d3,LOC102797457 other downstream 864574 33399801 ~ 33416086 (+)
G189269 NA other downstream 918769 33453996 ~ 33458768 (+)

Expression


Co-expression Network