G189037


Basic Information

Item Value
gene id G189037
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 32754590 ~ 32755953 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU256162
aacattttattataatttttctctcaaatgctataaaatgtaataaaacttGCGAAGATCGTTGTAGGGAGCCATCCACGTTATTACTTTTGAAAatttgatatagaaactttttgaaaatgggtcaaatttgacccaaaggacaacaggagggtcaACAATCTTTCCATGTACCCCCTAAACCAGTAATTCCCAACCCCGGTAATACAAtgaaataacaacaaaataaacaaccAACTGTAAACCTAATGAACATACTATGTAGATGTGGTAACAACGTAAGCATGTTGCATACGTCTATCCCCAGTACATGGCATCCTAGGAGCCCTCTAAAGACCTCGGGTACTAGACACTAAATCTGGCAAACCGTTTATTTGACCTTTTCTTTCAAAAGCTGCCACTATCGCCATTCTTGGATTGATGGTGgcctgtctggctatcattgaACTGGTTTGGACCCAACTTCTTGTGTGTTTCTATCTATCCTGCTTAAAATGGACTTTTCTCCTTGCTGCTCACTTGGATGGAAAACTTTCCCTTACTGTGGAGGTGGAGGAGTAAAAAGGGGATGggtttccaaggcaacagccgCCCCTGTTGAGACAGCCCTGTGTGGAAGAGattatttgagtgattttgAGGCGCGGAGCTGTCGTTTTTTTTCGTCTCGGTGCAGCGGCGCCAGCTCCCGGCCTATTTGTGAGACGGCTTTAACGCTCGGATAAAGAGCCGAGGTGCTTCCTCCGAGCTCTTAGGGCGCCTGTTATTGACACTCCCACACGGAGAAATCTCAGAGAAAGGACAGGAGGCTCTCAGGGCCGTTTGTCTTGTGTTTTGGCGGCTGGTGATAGCGTCACGTTTACAGGAGCGTGACAGGGAGGGAAAAAACGGCCGCCGCGCTCGCTGATTGGGAGAGAAATGTTGTAAAATGTTGTCGTTGAAGCAGCAGCGGAGCGAGCAGACTCTTCACTCCATTCACTCCATTCACTCCAGACTTTTACCGAAGATTTTAGAATCCGTAACGGCCCATTCAGCCACACGAGGCTTCCAGTGCTGACTACCAATCTGTCTCCGTACCGCCGGCGAGCGCAGACCGATGTTTGTCTGAAAGCAGACTaactaaatacataaatgataaataaatacatttcagtgTAGTTTCCTACCTTGGCTGTAGAGATTTTTAggtaaaaagttaaataaagacATCTGCaacataaattgatgcagaaaatacacaaattgttgcagagtagggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256162 True 1259 lncRNA 0.45 2 32754590 32755953

Neighbor

gene id symbol gene type direction distance location
senp6a NA coding upstream 185313 32535735 ~ 32569277 (+)
cd109 NA coding upstream 608680 32111590 ~ 32145910 (+)
crnkl1 crnkl1 coding upstream 648930 32093951 ~ 32105660 (+)
nkx2.4b nkx2-4,LOC103364681,LOC102215835,LOC102780891 coding upstream 869788 31881465 ~ 31884802 (+)
nkx2.2b NA coding upstream 885294 31866894 ~ 31869296 (+)
nt5e NA coding downstream 343416 33099369 ~ 33127591 (+)
bub1 NA coding downstream 445452 33201405 ~ 33228839 (+)
LOC120546516 NA coding downstream 475081 33231034 ~ 33238327 (+)
LOC120546153 LOC103369399 coding downstream 523958 33279911 ~ 33286940 (+)
LOC120546181 adgrg6 coding downstream 873847 33629800 ~ 33666253 (+)
G189035 NA non-coding upstream 104245 32649830 ~ 32650345 (+)
G189027 NA non-coding upstream 183955 32563850 ~ 32570635 (+)
G189029 NA non-coding upstream 188229 32565532 ~ 32566361 (+)
LOC120547301 NA non-coding upstream 219363 32525522 ~ 32535227 (+)
G189024 NA non-coding upstream 238943 32515355 ~ 32515647 (+)
G189034 NA non-coding downstream 2888 32758841 ~ 32761089 (+)
G189114 htr1e,htr1b,LOC103130375,LOC106909287,LOC103457078 non-coding downstream 209321 32965274 ~ 32965502 (+)
G189117 NA non-coding downstream 216057 32972010 ~ 32972221 (+)
G189125 NA non-coding downstream 286945 33042898 ~ 33043227 (+)
G189131 NA non-coding downstream 322154 33078107 ~ 33078410 (+)
LOC120546196 LOC105017826 other upstream 972524 31776963 ~ 31782066 (+)
LOC120546816 NA other upstream 1140068 31606054 ~ 31614522 (+)
hivep2a LOC103373864 other upstream 1445194 31169067 ~ 31309396 (+)
G188352 NA other upstream 1872144 30611681 ~ 30882446 (+)
mei4 NA other downstream 209885 32965838 ~ 33041169 (+)
pex7 pex7,LOC102797744 other downstream 572139 33328092 ~ 33386989 (+)
LOC120546192 slc35d3,LOC102797457 other downstream 643848 33399801 ~ 33416086 (+)
G189269 NA other downstream 698043 33453996 ~ 33458768 (+)
G189309 NA other downstream 885667 33641620 ~ 33685556 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G307380 NA non-coding CI01000093 null 1131972 ~ 1132273 (+)