G189147


Basic Information

Item Value
gene id G189147
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 33140603 ~ 33143547 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU256300
ctggatttaccctgcagagatctgaggagcagttaaccagagtcctcacaaatccaccggaggttagaacgccaacacaaaggaagaggaaggtaacggagcacccaatccagatttttggggttagGCCAAATCCTgaaccccctggttgagattgtgctgactcctcctcccatcctcagtccatgaacacatgaatgaagtaaacagggactgtccttcctttgccgtacctgaagttgctgcattctggctgctggctggagattccttcatgcacaacttgtattctggacttgaatggccttcttttgactgaaagtactgccaaacaacaacttgttctgctcaccagatccatgtccactttctcacagcctactgctcacctgatccatgtccactttctcacagcctactgctcacctgatccatgtccactttctcacagcctactgctcaccagatccatgtccactttcttacagcctactgctcaccagatccatgtccacttcctcacagcctgctgcattgaacgctccacctacgtaaacaccttcccgtaatcaacggcgccgtcactacggTGACTAGCGTAGCGCAcctagtgcaagcgtagggttcgtttcggtgggaaaaaattctaaaggttcggcagaaacccaaccccgtcaaaaagcccaatattcagccgaatctgaagctgaatcctggattcggtgcatccctgctCATATGATAACAGAAACTGGAAGTGTATTTCTGTCAGGACACGTAGTGAAACTTTGGCTCTGAATGAATTCAGTTCTCTTCTCTGATAGTTGGAATCTGCAGACCAGACCAGATCTGAAATGGAGTTTTGGGGAAGTGAGAGGAGATCTTCTCTCGGTTTATTGCTGCTTCCCTTTTCATTAAAACACTAAGTCAGCGCTTATAAAGCATAAGTCTGCTAATATTCTACATTTTCTTCACGTAAATAAATCCcataaaaaagactaaaaccaaCAACGTGCTACGACCGGAACATTCTTCTCTCCAGGGGTCATATTTCATACTTCTATGGATATCGGCGGTCTGTGTGACTTGAGGACCGACCTGGTAAATACTTCATCATCTCATCAAACGTCTGCTTGGCTCGGAGTTGTTTGTCCTCAGCGGTTCGCTCCTCGCTGCTCTCGCAGAACACGGCGTCTGCGGGAAGAAATGACAACACCGAGCACTGATAGTGGGTAATTATTGCTTATGCATATGCTTTTATGGTGATAGTTGTTATTCTACATGACATAGGCAGGGCTCGAGCTTAAGGACGTCCCGtaagaagaaaatgaaaaaatcaATTTGTTGTAAGCAGCAGAACTTACACTTTGAGTACACTGTTTAtctatcgcaagtaatatcgttattgcaATATTTAACAGTTCAACATATTTCcctcatatcatgcagccctactgcagatactcaaaccagcccataTAGATGCTGCTACTGAGCCAggaattttacttttttcacattctgcttttttttcaaactccaCTGTCcacttaaacatgttttaagtcCTGCTAACTTTGAGTGTTAGTGTAGATGTAGTCTAGAAGAGGAAGCGCAGACCTCGGAGCTGTGTGATGAGGGAGACCATATGGTGCTCCTGGAGGATGTGCTCCAGTTTGGACTGCATGTACTGATCCATGTAGGCTTCaaacgtgttcttaaacaggaTCCTGCCGGCAGCCAGACAGTGGTGCAGCCAGTCGGCCGTGTGGAACACCACCTTACCTGTGggtCGATGTACATCATGTAGTCATACATGCCGTCTACAGAAACCATTTCCATGAAGCAGTTGTGGTTTTGTTTCCGCTCCAAACTCTCTGACAGGTTGGCGTTATTCTTGAACAGGTCGCTGAAGAGCTGCAGGTTAAAGTGAAATGATGACAGAACACTGAACGGGACAATCTGTGGAGTTAACAGGCTCGCAGTCTGCACATTCTCATGTTTATAACAAACAAAATCAGCAATTATCTGTGGCACGAATGCCTGGGATCATTTTGGTATTCCATGTTATAAACACCTTACAAAATTCAAATTCCGTTCTCAGCTCAACACTTTAACACTTCGCTTCGGCATAAATATGCCATTTTTAAAGCTTGTTCACCTGTTATtccaattattattttacaagCAATGTAGGGCTATTTGTTTGAACGGGACAGTGCTCACTCTACATACATGTAAAACGCTACATTACATCACTTCTAGCACACTTCACGCTGAACAAAGACGGCAAAAAAGCATCACTGATCTGTTTTAATTAGCATTTTCTcgtcagcgctgtggagatcggTCTGGCCATGCGAGACTACCAGAAGGCtgaggcctcctgcacactggctgcgtggcgtgagcgtggcgtttctgttgcgtggcggctgcgtggtgttttctacgtctttacacaccagaacgGTGTCTGACGctgcactgctgctgctgctagccttgtctggacacatgtatgtttcccataaacataaatatatactgatctgattacagcaaagacaacgtcggcaggaTTGACGGcagaataggctccagaatatttccttctgtattgacaggtgcaatatttgaaaattgataattatttcttattatttttttaaattacatttatatatgtgCATTTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256300 True 2698 lncRNA 0.45 2 33140603 33143547

Neighbor

gene id symbol gene type direction distance location
nt5e NA coding upstream 13012 33099369 ~ 33127591 (+)
senp6a NA coding upstream 571326 32535735 ~ 32569277 (+)
cd109 NA coding upstream 994693 32111590 ~ 32145910 (+)
crnkl1 crnkl1 coding upstream 1034943 32093951 ~ 32105660 (+)
nkx2.4b nkx2-4,LOC103364681,LOC102215835,LOC102780891 coding upstream 1255801 31881465 ~ 31884802 (+)
bub1 NA coding downstream 57858 33201405 ~ 33228839 (+)
LOC120546516 NA coding downstream 87487 33231034 ~ 33238327 (+)
LOC120546153 LOC103369399 coding downstream 136364 33279911 ~ 33286940 (+)
LOC120546181 adgrg6 coding downstream 486253 33629800 ~ 33666253 (+)
LOC120546767 LOC103364257,LOC107092024 coding downstream 864849 34008396 ~ 34013448 (+)
G189136 NA non-coding upstream 46323 33093849 ~ 33094280 (+)
G189134 NA non-coding upstream 47268 33092717 ~ 33093335 (+)
G189131 NA non-coding upstream 62193 33078107 ~ 33078410 (+)
G189125 NA non-coding upstream 97376 33042898 ~ 33043227 (+)
G189117 NA non-coding upstream 168382 32972010 ~ 32972221 (+)
G189152 NA non-coding downstream 9678 33153225 ~ 33153466 (+)
G189156 NA non-coding downstream 35207 33178754 ~ 33184837 (+)
G189167 NA non-coding downstream 95151 33238698 ~ 33239145 (+)
G189171 NA non-coding downstream 110116 33253663 ~ 33254113 (+)
G189219 NA non-coding downstream 143431 33286978 ~ 33287313 (+)
mei4 NA other upstream 99434 32965838 ~ 33041169 (+)
myo6a myo6,LOC103369425 other upstream 373600 32576456 ~ 32767003 (+)
LOC120546196 LOC105017826 other upstream 1358537 31776963 ~ 31782066 (+)
LOC120546816 NA other upstream 1526081 31606054 ~ 31614522 (+)
hivep2a LOC103373864 other upstream 1831207 31169067 ~ 31309396 (+)
pex7 pex7,LOC102797744 other downstream 184545 33328092 ~ 33386989 (+)
LOC120546192 slc35d3,LOC102797457 other downstream 256254 33399801 ~ 33416086 (+)
G189269 NA other downstream 310449 33453996 ~ 33458768 (+)
G189309 NA other downstream 498073 33641620 ~ 33685556 (+)
LOC120547364 NA other downstream 619918 33763465 ~ 33763626 (+)

Expression


Co-expression Network