G189535


Basic Information

Item Value
gene id G189535
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34394786 ~ 34438684 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU256850
tgaaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagctacacacacacacacacacaacacacagcacagacattctgcacacacacacacataaacacacaaacacacacacacacacacacacagctacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagctacacacacacacacacacacagttacagacacagctacacacacacacacacaaacacagaaacacacacacagacacacacacagagacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacagac
>TU256853
tgaaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagctacacacacacacacacacaacacacagcacagacattctgcacacacacacacataaacacacaaacacacacacacacacacacacagctacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagctacacacacacacacacacacagttacagacacagctacacacacacacacacaaacacagaaacacacacacagacacacacacacagagacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacagac
>TU256855
tgaaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagctacacacacacacacacacaacacacagcacagacattctgcacacacacacacataaacacacaaacacacacacacacacacacacagctacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagctacacacacacacacacacacagttacagacacagctacacacacacacacacaaacacagaaacacacacacagacacacacctacatacacacacacacacagacacacacacacacacacacacacagagacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacagac
>TU256857
tgaaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagctacacacacacacacacacaacacacagcacagacattctgcacacacacacacataaacacacaaacacacacacacacacacacacacacagctacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagctacacacacacacacacacacagttacagacacagctacacacacacacacacaaacacagaaacacacacacagacacacacacagagacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacagac
>TU256858
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagctacacacacacacacacacacacacagctacagacacagctacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagctacacacacacacacacacacagttacagacacagctacacacacacacacacaaacacagaaacacacacacagacacacacacacacacacacagagacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacagagacacacacacagac

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU256850 False 514 lncRNA 0.49 3 34394786 34438684
TU256853 False 516 lncRNA 0.49 3 34394786 34438684
TU256855 True 558 lncRNA 0.49 3 34394786 34438684
TU256857 False 518 lncRNA 0.49 3 34394786 34438684
TU256858 False 465 lncRNA 0.50 2 34407438 34438684

Neighbor

gene id symbol gene type direction distance location
LOC120546638 NA coding upstream 21284 34357882 ~ 34373502 (+)
LOC120546567 NA coding upstream 40669 34343568 ~ 34354117 (+)
LOC120546450 NA coding upstream 61783 34318325 ~ 34333003 (+)
LOC120546449 NA coding upstream 207231 34184189 ~ 34187555 (+)
LOC120546562 NA coding upstream 221172 34110079 ~ 34173614 (+)
LOC120546659 rrm2 coding downstream 76138 34514822 ~ 34527646 (+)
LOC120547360 NA coding downstream 80604 34519288 ~ 34519426 (+)
LOC120547361 NA coding downstream 86204 34524888 ~ 34525026 (+)
LOC120546680 rrm2 coding downstream 121248 34559932 ~ 34571848 (+)
LOC120547362 NA coding downstream 126785 34565469 ~ 34565607 (+)
LOC120546564 NA non-coding upstream 59458 34333258 ~ 34335328 (+)
G189467 NA non-coding upstream 112111 34282045 ~ 34282675 (+)
G189460 NA non-coding upstream 193462 34200977 ~ 34201324 (+)
G189456 NA non-coding upstream 233027 34155729 ~ 34161759 (+)
LOC120546565 NA non-coding upstream 257746 34134333 ~ 34137040 (+)
G189560 NA non-coding downstream 17943 34456627 ~ 34457292 (+)
G189550 NA non-coding downstream 22985 34461669 ~ 34517856 (+)
G189568 NA non-coding downstream 45192 34483876 ~ 34562252 (+)
G189572 NA non-coding downstream 55012 34493696 ~ 34494487 (+)
G189548 NA non-coding downstream 103983 34542667 ~ 34562894 (+)
LOC120546766 LOC103364256 other upstream 394250 33859146 ~ 34000536 (+)
G189305 NA other upstream 408310 33965583 ~ 33986476 (+)
G189307 NA other upstream 455399 33932064 ~ 33939387 (+)
LOC120546446 LOC103364256 other upstream 538374 33846444 ~ 33856412 (+)
LOC120546444 NA other upstream 623384 33765353 ~ 33771402 (+)
G189544 NA other downstream 24224 34462908 ~ 34464897 (+)
G189541 zdhhc14,LOC102790573,LOC102208331 other downstream 44180 34482864 ~ 34503755 (+)
G189570 NA other downstream 47740 34486424 ~ 34487177 (+)
LOC120546454 NA other downstream 92704 34531388 ~ 34585439 (+)
G189545 NA other downstream 110685 34549369 ~ 34552365 (+)

Expression


Co-expression Network