G189560


Basic Information

Item Value
gene id G189560
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34456627 ~ 34457292 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU256910
AGGCGAAAGAAATTTTACAAACTTCCATCAAAAATGTCGACAAAATTAACAAATGTCTAAAATAAAAAGCGCGAAAAATgtcagatattcagtttcctgtcccaggggagagaagaaactagaaaatattcacctttaacacgctgacatcacacacgTTTACCTGTTTTTATCATAAAGAAATGACTCCAACTGATGAATGGATTATCAGAATAGTTAGGAGAGTATTTTAACAGTTgacaactcatccattcatctttaCAGCTGTGATCCCAGCTGTTCTTTGTCCCGCAGCGTCTCAACTTTGCAGATCATTTAGAGCGGAGTCCCCAGTCCAGATGTTGGGGGTCATTTAGAGCTGAAGACAGATCCCCAGTCCAGATGTTGGGGGTCATTTAGAGCTGAAGACAGAGTCCCAGTCCAGATGTTGGGGGTCATTTAGAGCTGAAGACAGAGTCCCAGTCCAGATGTTGGGATCCAGCTGCAGCCTCGGAGGTTTTGGGGACGGACGGGAAGATAGACTGCATCTTCTGTCTGAACTC

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256910 True 542 lncRNA 0.44 2 34456627 34457292

Neighbor

gene id symbol gene type direction distance location
LOC120546638 NA coding upstream 83125 34357882 ~ 34373502 (+)
LOC120546567 NA coding upstream 102510 34343568 ~ 34354117 (+)
LOC120546450 NA coding upstream 123624 34318325 ~ 34333003 (+)
LOC120546449 NA coding upstream 269072 34184189 ~ 34187555 (+)
LOC120546562 NA coding upstream 283013 34110079 ~ 34173614 (+)
LOC120546659 rrm2 coding downstream 57530 34514822 ~ 34527646 (+)
LOC120547360 NA coding downstream 61996 34519288 ~ 34519426 (+)
LOC120547361 NA coding downstream 67596 34524888 ~ 34525026 (+)
LOC120546680 rrm2 coding downstream 102640 34559932 ~ 34571848 (+)
LOC120547362 NA coding downstream 108177 34565469 ~ 34565607 (+)
G189535 NA non-coding upstream 17943 34394786 ~ 34438684 (+)
G189554 NA non-coding upstream 25583 34425974 ~ 34431044 (+)
G189539 NA non-coding upstream 45130 34410932 ~ 34411497 (+)
LOC120546564 NA non-coding upstream 121299 34333258 ~ 34335328 (+)
G189467 NA non-coding upstream 173952 34282045 ~ 34282675 (+)
G189550 NA non-coding downstream 4377 34461669 ~ 34517856 (+)
G189568 NA non-coding downstream 26584 34483876 ~ 34562252 (+)
G189572 NA non-coding downstream 36404 34493696 ~ 34494487 (+)
G189548 NA non-coding downstream 85375 34542667 ~ 34562894 (+)
G189575 NA non-coding downstream 87193 34544485 ~ 34546167 (+)
LOC120546451 LOC103364258,LOC108444017 other upstream 1283 34378500 ~ 34455344 (+)
LOC120546766 LOC103364256 other upstream 456091 33859146 ~ 34000536 (+)
G189305 NA other upstream 470151 33965583 ~ 33986476 (+)
G189307 NA other upstream 517240 33932064 ~ 33939387 (+)
LOC120546446 LOC103364256 other upstream 600215 33846444 ~ 33856412 (+)
G189544 NA other downstream 5616 34462908 ~ 34464897 (+)
G189541 zdhhc14,LOC102790573,LOC102208331 other downstream 25572 34482864 ~ 34503755 (+)
G189570 NA other downstream 29132 34486424 ~ 34487177 (+)
LOC120546454 NA other downstream 74096 34531388 ~ 34585439 (+)
G189545 NA other downstream 92077 34549369 ~ 34552365 (+)

Expression


Co-expression Network