G189720


Basic Information

Item Value
gene id G189720
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 34935517 ~ 35084911 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU257150
cacacacacacacagacacacatacacacacacacagacacacacagacacacacacacacacacacacacagacacacatacacacacacacacacacagacacacacattcacacagagacacaaacacattcacacacacacagacatacacacaacacacagacacacacacacacacagacacaaacacattcacacacagacatacacacaacacacacacacacacattcacacacacagacatacacacaacacacagacagacacacacacacagaaacactacTATTGGCTACGGTGAGATGTGGTCAGAGGGCGAGCGGCTCTGTGGACTTTGTAGTTTCCGTGTGTAGTTCCGTGGCTGTGCTTGCTGCTGCATGCTCTCAGCTGTTTGATGTTGTGTTGTGATTGGCCGCCTGCAGGCAGCCATGTTTGTAGTTCTTAACTCCAGTTTCTCTGATAAAAGAGAGAATCAGAAAAATGTGAAAGAGATGAAAAGTATTTAATAACATATTTAGGATTCCTGAACGTGACACTAAAATAAATCATGAGCTAATAGGatacctctccctctctctctctctccctcctttttttttttttttttttttttttctctctttttctctttttttctctctctctctctccctctctctccctct
>TU257151
caaagacacacacacacagacagacacacacacaacacacacacacacacacacacacacacacacagacacaaacacattcacacacagacatacacacaacacacacacacacacattcacacacacagacatacacacacacaacacacagacagacacacacacacacacacacacacacacacagacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacaacacacacacacacacacacacacacacaacacacacacacacacacacacacac
>TU257152
cacacacacacacagacacacatacacacacacacacacacagacacacacattcacacagagacacaaacacattcacacacacacagacatacacacaacacacagacacacacacacacacagacacaaacacattcacacacagacatacacacaacacacacacacacacattcacacacacagacatacacacacacaacacacagacagacacacacacacacacacacacacacacacagacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacaacacacacacacacacacacacacacacaacacacacacacacacacacacacac
>TU257153
cacacacatacacacagacgcacacacagacacacacattcacacagagacacaaacacattcacacacacacagacatacacacaacacacagacacacacacacacacagacacaaacacattcacacacagacatacacacaacacacacacacacacattcacacacacagacatacacacaacacacagacagacacacacacacagaaacactacTATTGGCTACGGTGAGATGTGGTCAGAGGGCGAGCGGCTCTGTGGACTTTGTAGTTTCCGTGTGTAGTTCCGTGGCTGTGCTTGCTGCTGCATGCTCTCAGCTGTTTGATGTTGTGTTGTGATTGGCCGCCTGCAGGCAGCCATGTTTGTAGTTCTTAACTCCAGTTTCTCTGATAAAAGAGAGAATCAGAAAAATGTGAAAGAGATGAAAAGTATTTAATAACATATTTAGGATTCCTGAACGTGACACTAAAATAAATCATGAGCTAATAGGatacctctctctctctctctctctccctctctctccctct
>TU257154
agacagacagacagacacacacacgcacacacacacacacagacacacacattcacacagagacacaaacacattcacacacacacagacatacacacaacacacagacacacacacacacacagacacaaacacattcacacacagacatacacacaacacacacacacacacattcacacacacagacatacacacaacacacagacagacacacacacacagaaacactacTATTGGCTACGGTGAGATGTGGTCAGAGGGCGAGCGGCTCTGTGGACTTTGTAGTTTCCGTGTGTAGTTCCGTGGCTGTGCTTGCTGCTGCATGCTCTCAGCTGTTTGATGTTGTGTTGTGATTGGCCGCCTGCAGGCAGCCATGTTTGTAGTTCTTAACTCCAGTTTCTCTGATAAAAGAGAGAATCAGAAAAATGTGAAAGAGATGAAAAGTATTTAATAACATATTTAGGATTCCTGAACGTGACACTAAAATAAATCATGAGCTAATAGGatacctctccctctctctctctctccttctctCTCT
>TU257155
aacacacagacagacacacacacacacacacacacacacacacacagacagacacacacacacagacacacacacacatacacacacacacagacacacacagacacacacacacacacacacacacagacacacatacacacacacacacacacagacacacacattcacacagagacacaaacacattcacacacacacagacatacacacaacacacagacacacacacacacacagacacaaacacattcacacacagacatacacacaacacacacacacacacattcacacacacagacatacacacaacacacagacagacacacacacacagaaacactacTATTGGCTACGGTGAGATGTGGTCAGAGGGCGAGCGGCTCTGTGGACTTTGTAGTTTCCGTGTGTAGTTCCGTGGCTGTGCTTGCTGCTGCATGCTCTCAGCTGTTTGATGTTGTGTTGTGATTGGCCGCCTGCAGGCAGCCATGTTTGTAGTTCTTAACTCCAGTTTCTCTGATAAAAGAGAGAATCAGAAAAATGTGAAAGAGATGAAAAGTATTTAATAACATATTTAGGATTCCTGAACGTGACACTAAAATAAATCATGAGCTAATAGGatacctctccctctctctctctctccctcctttttttttttttttttttttttttctctctttttctctttttttctctctctctctctccctctctctccctct
>TU257156
cacacacacacacacacacacacacacacatacacacacacacacacacagacacacacattcacacagagacacaaacacattcacacacacacagacatacacacaacacacagacacacacacacacacagacacaaacacattcacacacagacatacacacaacacacacacacacacattcacacacacagacatacacacacacaacacacagacagacacacacacacacacacacacacacacacagacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacaacacacacacacacacacacacacacacaacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257150 False 672 lncRNA 0.43 2 34990030 35014287
TU257151 False 306 lncRNA 0.47 3 34968175 35084911
TU257152 False 364 lncRNA 0.46 3 34990030 35084911
TU257153 False 535 lncRNA 0.44 3 34959252 35014287
TU257154 False 544 lncRNA 0.44 3 34966712 35065972
TU257155 True 728 lncRNA 0.44 3 34984450 35014287
TU257156 False 372 lncRNA 0.47 3 34935517 35084911

Neighbor

gene id symbol gene type direction distance location
LOC120546635 NA coding upstream 8354 34905991 ~ 34927163 (+)
LOC120546649 NA coding upstream 39983 34856836 ~ 34895534 (+)
LOC120546655 NA coding upstream 90425 34837198 ~ 34845092 (+)
LOC120546653 NA coding upstream 139114 34780338 ~ 34796403 (+)
LOC120546672 NA coding upstream 311344 34622056 ~ 34624173 (+)
gje1 LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776 coding downstream 103005 35187916 ~ 35193265 (+)
vta1 vta1 coding downstream 119295 35204206 ~ 35345930 (+)
ccr6a NA coding downstream 304798 35389709 ~ 35403269 (+)
LOC120546647 LOC100696183,LOC102786976 coding downstream 758851 35843762 ~ 35856031 (+)
LOC120546641 NA coding downstream 1148039 36232950 ~ 36257742 (+)
G189711 NA non-coding upstream 99113 34830676 ~ 34836404 (+)
G189601 NA non-coding upstream 198563 34708726 ~ 34736954 (+)
LOC120546687 NA non-coding upstream 212820 34720047 ~ 34722697 (+)
LOC120546688 NA non-coding upstream 216332 34717037 ~ 34719185 (+)
G189590 NA non-coding upstream 220084 34714902 ~ 34715433 (+)
G189726 NA non-coding downstream 12774 35097685 ~ 35126266 (+)
G189750 NA non-coding downstream 19089 35104000 ~ 35107669 (+)
G189752 NA non-coding downstream 41563 35126474 ~ 35181095 (+)
G189753 NA non-coding downstream 43963 35128874 ~ 35130294 (+)
G189755 NA non-coding downstream 50807 35135718 ~ 35137669 (+)
LOC120546458 NA other upstream 108026 34803603 ~ 34827491 (+)
G189582 NA other upstream 236026 34663015 ~ 34699491 (+)
G189577 NA other upstream 290207 34564785 ~ 34645310 (+)
LOC120546683 NA other downstream 60578 35145489 ~ 35147428 (+)
G189723 NA other downstream 73312 35158223 ~ 35166388 (+)
G189770 NA other downstream 156344 35241255 ~ 35315037 (+)
G189769 NA other downstream 164830 35249741 ~ 35299978 (+)
LOC120546462 NA other downstream 441937 35526848 ~ 35532983 (+)

Expression


Co-expression Network