LOC120546683


Basic Information

Item Value
gene id LOC120546683
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35145489 ~ 35147428 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU257203
GCTTGGTTTGTTTTGGTTGAGTTTCCCTGACAGCGGCAGTTAGCAGCAGTTAGCGGTTAGCACTTAGCTTGAAGCTAACCATGTCAGCCACAGAGGACGACACGGAGCTGCGGGACCTGCTGATCCAGAACCTGGAGAACAACGGAGTCCTCAACAAACTCAAGGCAGAGATGAGGGCAGCGGTGTTCCTGGCGATGGAGGAGCAGGACAGACTGGAGGTGACGGTTCAGATAAGACTCAGCTTTTATATAATTCAGGACTAGGGTCGTCCCGGGACCTCGTGATTGTTGGAGTCCTTCGGTCAcccttttacaccgtttagctccCAGCATTTAACCCTGTTTAacccagctgctagctaacgctaggctaacatCAACG
>XR_005636906.1
aagaagaagaagacgctTCCGGCTTGGTTTGTTTTGGTTGAGTTTCCCTGACAGCGGCAGTTAGCAGCAGTTAGCGGTTAGCACTTAGCTTGAAGCTAACCATGTCAGCCACAGAGGACGACACGGAGCTGCGGGACCTGCTGATCCAGAACCTGGAGAACAACGGAGTCCTCAACAAACTCAAGGCAGAGATGAGGGCAGCGGTGTTCCTGGCGATGGAGGAGCAGGACAGACTGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257203 True 381 TUCP 0.52 2 35145510 35147428
XR_005636906.1 False 239 lncRNA 0.54 2 35145489 35147265

Neighbor

gene id symbol gene type direction distance location
allc allc coding upstream 204158 34928418 ~ 34941331 (+)
LOC120546635 NA coding upstream 218326 34905991 ~ 34927163 (+)
LOC120546649 NA coding upstream 249955 34856836 ~ 34895534 (+)
LOC120546655 NA coding upstream 300397 34837198 ~ 34845092 (+)
LOC120546653 NA coding upstream 349086 34780338 ~ 34796403 (+)
gje1 LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776 coding downstream 40488 35187916 ~ 35193265 (+)
vta1 vta1 coding downstream 56778 35204206 ~ 35345930 (+)
ccr6a NA coding downstream 242281 35389709 ~ 35403269 (+)
LOC120546647 LOC100696183,LOC102786976 coding downstream 696334 35843762 ~ 35856031 (+)
LOC120546641 NA coding downstream 1085522 36232950 ~ 36257742 (+)
G189755 NA non-coding upstream 7820 35135718 ~ 35137669 (+)
G189753 NA non-coding upstream 15195 35128874 ~ 35130294 (+)
G189726 NA non-coding upstream 19223 35097685 ~ 35126266 (+)
G189750 NA non-coding upstream 37820 35104000 ~ 35107669 (+)
G189720 NA non-coding upstream 60578 34935517 ~ 35084911 (+)
G189727 NA non-coding downstream 14629 35162057 ~ 35163515 (+)
G189763 NA non-coding downstream 27382 35174810 ~ 35175869 (+)
G189731 NA non-coding downstream 30197 35177625 ~ 35178368 (+)
G189771 NA non-coding downstream 97096 35244524 ~ 35245381 (+)
G189767 NA non-coding downstream 111150 35258578 ~ 35446421 (+)
G189721 NA other upstream 68522 35014395 ~ 35076967 (+)
G189738 NA other upstream 134664 35009500 ~ 35010825 (+)
LOC120546458 NA other upstream 317998 34803603 ~ 34827491 (+)
G189582 NA other upstream 445998 34663015 ~ 34699491 (+)
LOC120546652 NA other upstream 514554 34627478 ~ 34630935 (+)
G189723 NA other downstream 10795 35158223 ~ 35166388 (+)
G189770 NA other downstream 93827 35241255 ~ 35315037 (+)
G189769 NA other downstream 102313 35249741 ~ 35299978 (+)
LOC120546462 NA other downstream 379420 35526848 ~ 35532983 (+)
LOC120546463 myh6,LOC108251423,LOC102786665,LOC780532,LOC103381356,LOC103031694 other downstream 549699 35697127 ~ 35877941 (+)

Expression


Co-expression Network