G189767


Basic Information

Item Value
gene id G189767
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35258578 ~ 35446421 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU257218
taaatCATCGTTcatacgcaaagtcatgatgccatctTGTATACACACAAGGTACGGAAGCCCTGAGaggccaaaaaaaaagagaaaacttgGCTTTCTGGAGTTTGACCTCTACTGAATGATGTCAGCAGACTCTCGTCTGTGAAGAGCGTAAAAAGGAACAGCTCTCACGCTACGTAACTCGCCAGGATACCGCCCGAAAAATAACGCTAAACGGTTCATATCAGAAGCCGACTGTCGCCCggagaggcttttattttggtaaccCTTTActttgaaggtatcgacataatggTGACATCACACTGTCGTAACTATGACGTCACACTGTCaggaacgtgtcataaacgttataaacaaagTCACTAACGTtgatgacttctgtcattaagggtcattcggtttttgttcatgacaagttgacattgtttgggttgtcttgttCACgaaaacttgacattaaccaaaGTGACAtcaccagaagttgtcttgattatgacaagttgacattgtttgggttgtcttgattatgacaacttgacattaaccaggatgacattaccagaagatgtatttgtaatgacaagttgacattacatttctttggagtgtccttattaag
>TU257221
acacacacactcacacacacacacacacacacacggacatggacacacacagacgtatgctcgcaagcgcacacacacacacacacacacatgcatatatacacacacacacacacacacacatggacacacagacgcacgcaaGAACACACGTGtggggtacacacacacacacacaggcagacagacacacacacacacggacacacatgcTCGCACGCACGCAAgaacccactcacacacacacacacacgtatgctcgcatgcacacacacacacagacacacacagacacacacatgctctcaTCAACCGGCTCATTACAGACTCATCAATATTGTCACAAACGGCACATTAAGGTTATTGTTATGGAGTTGCAGCTCCGttctgcatatatatatatatatagatagatggcatcatgactttgcgtatgAACGATGATTTACATGACTTTGCGTATGAACGATGatttacagtatactgtaaatCATCGTTcatacgcaaagtcatgatgccatctTGTATACACACAAGGTACGGAAGCCCTGAGaggccaaaaaaaaagagaaaacttgGCTTTCTGGAGTTTGACCTCTACTGAATGATGTCAGCAGACTCTCGTCTGTGAAGAGCGTAAAAAGGAACAGCTCTCACGCTACGTAACTCGCCAGGATACCGCCCGAAAAATAACGCTAAACGGTTCATATCAGAAGCCGACTGTCGCCCggagaggcttttattttggtaaccCTTTActttgaaggtatcgacataatggTGACATCACACTGTCGTAACTATGACGTCACACTGTCaggaacgtgtcataaacgttataaacaaagTCACTAACGTtgatgacttctgtcattaagggtcattcggtttttgttcatgacaagttgacattgtttgggttgtcttgttCACgaaaacttgacattaaccaaaGTGACAtcaccagaagttgtcttgattatgacaagttgacattgtttgggttgtcttgattatgacaacttgacattaaccaggatgacattaccagaagatgtatttgtaatgacaagttgacattacatttctttggagtgtccttattaag
>TU257223
acacacacacacacacacacacacacacacacacacacacacacacacacacaaacagacacacacacacagaagcagaaacagacacacacacacagaagcagaaacagacacacacacacacacacaaacacagaagcagaaacagacacacacacacagaagcagaaacagacacacacacacacacacacacacacacaaacacagaagcagaaacagacacacacacactgacacatacacacacagaagcagaaacacacacacacacacacagcgcacagCCTCGGCGTCAGAGGAGGACATGATGTAAATCTGTCGGCAACAATGGCCGCCTGTGTCTCTCCACCGACTGACTGCACAGCTCGCCGACTCCCTGCCTGATGATTATTAATAATCGCAGCCCGGTTATTGAACCCCCGAGCCTCCCTAGAGGGGTCAGGAGCTCTCCGGTGAGCCCGGGAAACCAACCGGAGTACCAGTCAGGTGTTCATCTTCCTGAAAACACACCCAAATGTTCCCGAAAATGTccccaacaaacacacacacacacacacacacacgatgacATAAACTGTTAACCATTTTCATGCTGTGAACAGGAAATGTTGCATTAGTAATGCACTGTGATTTGTGGAGGTTTTCATAATGCATTTTAACGCTGCTGTCGTCCATGttgtcaaatctgacccattttcaaagttgaTATGTcaaaaatttgggtttctttcaaccaaatagtTCCAAAAATACCACTGATGGTTCCATACAGGAAACAGGCTGCGATTATCCATCAGCATACGTTCTTCTGATCACACACGGGCACACAC
>TU257224
acacacacactcacacacacacacacacacacacacacacggacatggacacacacagacgtatgctcgcaagcgcacacacacacacacacacacatgcatatatacacacacacacacacacacacatggacacacagacgcacgcaaGAACACACGTGtggggtacacacacacacacacaggcagacagacacacacacacacggacacacatgcTCGCACGCACGCAAgaacccactcacacacacacacacacgtatgctcgcatgcacacacacacacagacacacacagacacacacatgctctcaTCAACCGGCTCATTACAGACTCATCAATATTGTCACAAACGGCACATTAAGGTTATTGT
>TU257228
acacacacactcacacacacacacacacacacacacacacacggacatggacacacacagacgtatgctcgcaagcgcacacacacacacacacacacatgcatatatacacacacacacacacacacacatggacacacagacgcacgcaaGAACACACGTGtggggtacacacacacacacacaggcagacagacacacacacacacggacacacatgcTCGCACGCACGCAAgaacccactcacacacacacacacacgtatgctcgcatgcacacacacacacagacacacacagacacacacatgctctcaTCAACCGGCTCATTACAGACTCATCAATATTGTCACAAACGGCACATTAAGGTTATTGT
>TU257230
acacacacactcacacacacacacacacacacacggacatggacacacacagacgtatgctcgcaagcgcacacacacacacacacacacatgcatatatacacacacacacacacacacacatggacacacagacgcacgcaaGAACACACGTGtggggtacacacacacacacacaggcagacagacacacacacacacggacacacatgcTCGCACGCACGCAAgaacccactcacacacacacacacacgtatgctcgcatgcacacacacacacagacacacacagacacacacatgctctcaTCAACCGGCTCATTACAGACTCATCAATATTGTCACAAACGGCACATTAAGGTTATTGTTATGGAGTTGCAGCTCCGttctgcatatatatatatatatagatagatggcatcatgactttgcgtatgAACGATGATTTACATGACTTTGCGTATGAACGATGatttacagtatactgtaaatCATCGTTcatacgcaaagtcatgatgccatctTGTATACACACAAGGTACGGAAGCCCTGAGaggccaaaaaaaaagagaaaacttgGCTTTCTGGAGTTTGACCTCTACTGAATGATGTCAGCAGACTCTCGTCTGTGAAGAGCGTAAAAAGGAACAGCTCTCACGCTACGTAACTCGCCAGGATACCGCCCGAAAAATAACGCTAAACGGTTCATATCAGAAGCCGACTGTCGCCCggagaggcttttattttggtaaccCTTTActttgaaggtatcgacataatggTGACATCACACTGTCGTAACTATGACGTCACACTGTCaggaacgtgtcataaacgttataaacaaagTCACTAACGTtgatgacttctgtcattaagggtcattcggtttttgttcatgacaagttgacattgtttgggttgtcttgttCACgaaaacttgacattaaccaaaGTGACAtcaccagaagttgtcttgattatgacaagttgacattaaccaggatgacataatgtcaacttgtcgtgaccaagacaacttctggtgatgtcactttgattaatgtcaacttgtcataagAAAGACAACCCAAACTAATTTTATGTCAACTATGTCACCGAATggcacttaatgacagaagtcctAAACGTGAAATGACGACACGTTCCTGACAGTGTGATGTCATAGTTACGACAGTGTGATGTCATAGTTACGACAGTGTGATGTCATAGTTACGACAGCGTCGTGTCACGATTACGTCGATACCTCCGAGTCGAGAAGAACCTTTTCTCGTCTTCGTTGTCTTCTCTGTTTCGGACGTTGTTTTAACTCCACGTTTTCGTAGTTTTTTTTACGAGCTTAAAGTGCCGAAGTTTTGAGCGATCAAActgctgtctttctttctttctttgaggtttttatttttatttttttgggaatACTTTCTGTATGTGTTGGTGTATCTGTGAGAGCGTTTAGTTTAGGGGTTGATATTTAACATTTCTCACCGTGTGTCAGAATCACAGCGatttaatttgaataaaatgtttgaaataTGATCAAATATTGACTCGTCTGTGTTTCCTGAACTTATCTGGTATCTGGGTCTGTGAGATATGAAGAATACaaaaatattcttttattttctctttgttcaccggggtacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacagacacacacacacacagagagacacaaacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257218 False 622 lncRNA 0.41 2 35348345 35446421
TU257221 False 1108 lncRNA 0.43 4 35258578 35446421
TU257223 False 833 lncRNA 0.47 2 35297110 35347184
TU257224 False 373 lncRNA 0.50 2 35258578 35348195
TU257228 False 375 lncRNA 0.50 2 35258578 35348195
TU257230 True 1863 lncRNA 0.42 4 35258578 35376057

Neighbor

gene id symbol gene type direction distance location
gje1 LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776 coding upstream 65313 35187916 ~ 35193265 (+)
allc allc coding upstream 317247 34928418 ~ 34941331 (+)
LOC120546635 NA coding upstream 331415 34905991 ~ 34927163 (+)
LOC120546649 NA coding upstream 363044 34856836 ~ 34895534 (+)
LOC120546655 NA coding upstream 413486 34837198 ~ 34845092 (+)
LOC120546647 LOC100696183,LOC102786976 coding downstream 397341 35843762 ~ 35856031 (+)
LOC120546641 NA coding downstream 786529 36232950 ~ 36257742 (+)
LOC120546639 NA coding downstream 822867 36269288 ~ 36313267 (+)
LOC120546666 NA coding downstream 883724 36330145 ~ 36333053 (+)
LOC120546651 NA coding downstream 1219660 36666081 ~ 36681833 (+)
G189771 NA non-coding upstream 13197 35244524 ~ 35245381 (+)
G189752 NA non-coding upstream 77483 35126474 ~ 35181095 (+)
G189731 NA non-coding upstream 80210 35177625 ~ 35178368 (+)
G189763 NA non-coding upstream 82709 35174810 ~ 35175869 (+)
G189727 NA non-coding upstream 95063 35162057 ~ 35163515 (+)
G189790 NA non-coding downstream 64004 35510425 ~ 35510900 (+)
G189793 LOC105912973,LOC105900140,LOC105893089 non-coding downstream 84040 35530461 ~ 35569802 (+)
LOC120546690 NA non-coding downstream 90284 35536705 ~ 35538563 (+)
G189801 NA non-coding downstream 152693 35599114 ~ 35787979 (+)
G189809 NA non-coding downstream 218773 35665194 ~ 35670696 (+)
G189723 NA other upstream 92190 35158223 ~ 35166388 (+)
LOC120546683 NA other upstream 111150 35145489 ~ 35147428 (+)
G189721 NA other upstream 181611 35014395 ~ 35076967 (+)
G189738 NA other upstream 247753 35009500 ~ 35010825 (+)
LOC120546458 NA other upstream 431087 34803603 ~ 34827491 (+)
LOC120546462 NA other downstream 80427 35526848 ~ 35532983 (+)
LOC120546463 myh6,LOC108251423,LOC102786665,LOC780532,LOC103381356,LOC103031694 other downstream 250706 35697127 ~ 35877941 (+)
zbtb25 zbtb25 other downstream 466075 35912496 ~ 35917525 (+)
G189858 NA other downstream 535397 35981818 ~ 36019599 (+)
G189895 LOC107578167,LOC107555837,LOC103375881,LOC103392301 other downstream 767460 36213881 ~ 36214599 (+)

Expression


Co-expression Network