G189772


Basic Information

Item Value
gene id G189772
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35328189 ~ 35376943 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU257258
gtctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtttttgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG:

id description
ko00350 Tyrosine metabolism
ko04916 Melanogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU257258 True 230 lncRNA 0.50 2 35328189 35376943

Neighbor

gene id symbol gene type direction distance location
gje1 LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776 coding upstream 134924 35187916 ~ 35193265 (+)
allc allc coding upstream 386858 34928418 ~ 34941331 (+)
LOC120546635 NA coding upstream 401026 34905991 ~ 34927163 (+)
LOC120546649 NA coding upstream 432655 34856836 ~ 34895534 (+)
LOC120546655 NA coding upstream 483097 34837198 ~ 34845092 (+)
ccr6a NA coding downstream 12766 35389709 ~ 35403269 (+)
LOC120546647 LOC100696183,LOC102786976 coding downstream 466819 35843762 ~ 35856031 (+)
LOC120546641 NA coding downstream 856007 36232950 ~ 36257742 (+)
LOC120546639 NA coding downstream 892345 36269288 ~ 36313267 (+)
LOC120546666 NA coding downstream 953202 36330145 ~ 36333053 (+)
G189771 NA non-coding upstream 82808 35244524 ~ 35245381 (+)
G189731 NA non-coding upstream 149821 35177625 ~ 35178368 (+)
G189763 NA non-coding upstream 152320 35174810 ~ 35175869 (+)
G189727 NA non-coding upstream 164674 35162057 ~ 35163515 (+)
G189755 NA non-coding upstream 190520 35135718 ~ 35137669 (+)
G189784 NA non-coding downstream 55732 35432675 ~ 35509997 (+)
G189785 NA non-coding downstream 62018 35438961 ~ 35558041 (+)
G189790 NA non-coding downstream 133482 35510425 ~ 35510900 (+)
G189793 LOC105912973,LOC105900140,LOC105893089 non-coding downstream 153518 35530461 ~ 35569802 (+)
LOC120546690 NA non-coding downstream 159762 35536705 ~ 35538563 (+)
G189770 NA other upstream 13152 35241255 ~ 35315037 (+)
G189769 NA other upstream 28211 35249741 ~ 35299978 (+)
G189723 NA other upstream 161801 35158223 ~ 35166388 (+)
LOC120546683 NA other upstream 180761 35145489 ~ 35147428 (+)
G189721 NA other upstream 251222 35014395 ~ 35076967 (+)
LOC120546462 NA other downstream 149905 35526848 ~ 35532983 (+)
LOC120546463 myh6,LOC108251423,LOC102786665,LOC780532,LOC103381356,LOC103031694 other downstream 320184 35697127 ~ 35877941 (+)
zbtb25 zbtb25 other downstream 535553 35912496 ~ 35917525 (+)
G189858 NA other downstream 604875 35981818 ~ 36019599 (+)
G189895 LOC107578167,LOC107555837,LOC103375881,LOC103392301 other downstream 836938 36213881 ~ 36214599 (+)

Expression


Co-expression Network