G189785


Basic Information

Item Value
gene id G189785
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35438961 ~ 35558041 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU257279
acacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacacacatacacacagacacacacacagacacacacacacagacacacacacacacacacacacacacacacacagacacacacacagacacacacacacacacacacacacacacagacacacacacacacacacacacacacacagacacacacacagacacacacagacacacacacacacagacacacacacacatacacacacacagacacacacacacagatacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacacacacacacacagacac
>TU257280
gagacacacacacagacacacacacacacacagacacacacagacacacagacacacacacacacacacacagacacacacacacacacacacacacacacacacacacagacacacaggcacacacacagacacacacacacacacacagacagacagacagacagacagacacacacacacacagacagacagacagacagacagacacacacacagacacacacagacacacacacacagacacacagacacacacacacacaggcacacacagacagacacacacagacacacacacacacacacacacacacacagacacacacagacacacacacacacacagacacacacacacatacacacacacagacacacacacacagatacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacatacacacacagacacacacacacagacacac
>TU257281
cacacacatacacacacacacacacacaggcacacacacacacacacacacacacacacacacacacacacacacacacacacacacaggcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacagacagacagacacacagacacacacacacacacacagacagacacacacacatacacacacacacacacagacagacacacacagacacacacacacacacatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaggcac
>TU257283
acacacagacacacacagtcacacacacacacacacagacacacacagacacacagacacacacacacacacacacagacacacacacacacacacacacacacacacacacacagacacacaggcacacacacagacacacacacacacacacagacagacagacagacagacacacacacacacacacagacacacacacacagacagacagacagacacacacacacacacatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaggcac
>TU257284
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatatagacacacacacagacacacacacacagacacacacacacacacacacacacacacacacagacacacacacagacacacacacacacacacacacacacacagacacacacacacacacacacacacacacagacacacacacagacacacacagacacacacacacacagacacacacacacatacacacacacagacacacacacacagatacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacacacacacacacagacac
>TU257285
gagacacacacacagacacacacacacacacagacacacacagacacacagacacacacacacacacacacagacacacacacacacacacacacacacacacacacacagacacacaggcacacacacagacacacacacacacacacagacagacagacagacagacacacacacacacacacagacacacacacacagacagacagacacacacacacacagacaaacacacacacacacacagacaaacacacacacacacacac
>TU257286
atacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacagagagacacacagacacacacacacacacacacacacacacacacagacacacacacagacacacacacacacacacacacacacacagacacacacacacacacacacacacacacagacacacacacagacacacacagacacacacacacacagacacacacacacatacacacacacagacacacacacacagatacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacagacacacacacatacacacacagacacacacacacagacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257279 False 410 lncRNA 0.49 3 35483048 35554754
TU257280 True 527 lncRNA 0.50 5 35459937 35558041
TU257281 False 383 lncRNA 0.50 3 35438961 35497639
TU257283 False 310 lncRNA 0.50 2 35497216 35497639
TU257284 False 409 lncRNA 0.49 3 35549994 35554754
TU257285 False 269 lncRNA 0.50 3 35459937 35547399
TU257286 False 408 lncRNA 0.49 4 35498106 35558041

Neighbor

gene id symbol gene type direction distance location
ccr6a NA coding upstream 35692 35389709 ~ 35403269 (+)
vta1 vta1 coding upstream 93031 35204206 ~ 35345930 (+)
gje1 LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776 coding upstream 245696 35187916 ~ 35193265 (+)
allc allc coding upstream 497630 34928418 ~ 34941331 (+)
LOC120546635 NA coding upstream 511798 34905991 ~ 34927163 (+)
LOC120546647 LOC100696183,LOC102786976 coding downstream 285721 35843762 ~ 35856031 (+)
LOC120546641 NA coding downstream 674909 36232950 ~ 36257742 (+)
LOC120546639 NA coding downstream 711247 36269288 ~ 36313267 (+)
LOC120546666 NA coding downstream 772104 36330145 ~ 36333053 (+)
LOC120546651 NA coding downstream 1108040 36666081 ~ 36681833 (+)
G189772 NA non-coding upstream 62018 35328189 ~ 35376943 (+)
G189771 NA non-coding upstream 193580 35244524 ~ 35245381 (+)
G189731 NA non-coding upstream 260593 35177625 ~ 35178368 (+)
G189763 NA non-coding upstream 263092 35174810 ~ 35175869 (+)
G189727 NA non-coding upstream 275446 35162057 ~ 35163515 (+)
G189801 NA non-coding downstream 41073 35599114 ~ 35787979 (+)
G189809 NA non-coding downstream 107153 35665194 ~ 35670696 (+)
G189831 NA non-coding downstream 239569 35797610 ~ 35817091 (+)
G189829 NA non-coding downstream 250785 35808826 ~ 35820379 (+)
G189827 NA non-coding downstream 258118 35816159 ~ 35822212 (+)
G189770 NA other upstream 123924 35241255 ~ 35315037 (+)
G189769 NA other upstream 138983 35249741 ~ 35299978 (+)
G189723 NA other upstream 272573 35158223 ~ 35166388 (+)
LOC120546683 NA other upstream 291533 35145489 ~ 35147428 (+)
G189721 NA other upstream 361994 35014395 ~ 35076967 (+)
LOC120546463 myh6,LOC108251423,LOC102786665,LOC780532,LOC103381356,LOC103031694 other downstream 139086 35697127 ~ 35877941 (+)
zbtb25 zbtb25 other downstream 354455 35912496 ~ 35917525 (+)
G189858 NA other downstream 423777 35981818 ~ 36019599 (+)
G189895 LOC107578167,LOC107555837,LOC103375881,LOC103392301 other downstream 655840 36213881 ~ 36214599 (+)
G189897 NA other downstream 674624 36232665 ~ 36375834 (+)

Expression


Co-expression Network