LOC120546462


Basic Information

Item Value
gene id LOC120546462
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35526848 ~ 35532983 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU257294
GAGAGGCTGACATCTACCTAGTGACGTTTTTGGACTGAAGTTGTAAGGGTGTGCCATTGTCCTCGgatcacacgcacacagagaccaGGATGGACGACGATGAAAAGAGCAGCTTTATCTCTGCCAGTGTTTCCTCGACAAATGAAGTTGGAAAGTCTCTAAATCAACCTGAACAACAAAAGATAGAGAAATCGGACCTCTTAAGAACTTTTGAAGATTTGGGAGCCAAAGACTTTAAACGCTTCCAGTGGCTCCTGCAGCAGCCAGAGGTCCTTAAAGACTTCCCAGCAATCCCAAAGAGTCGACTGGAGAATGCAGACCGGATGGACACAGTGGATCAGATGTTCCAGATCTATAGTATAAACACTTTTAAAGTGACCAAGATAGTTTTAGAAAAGATGAATCAGAATGATCTAGTTCTAGATCTAGAGAAGTTAACAAAGACCGTTACAGAACCTGCAGAGAGTATTGCTGCAAAGAAGATATACAAAAACCGTCTTCATCAGATCTATGTAGATCGGATCTACTACACCAGTTTTTCTAGGCCTGGAAGTTACCCATATGGACAGGACTGGACTGGAGACGGACAAGAGATGGCAGTTGGAAGTGACGGGTCAGGAAGTGAGAATAGTGTAGGCCAGTGGTCAAAAAGTGGGAAAAAACGAAAGAAAGCAATACAGCA
>XM_039781389.1
TTGTAAGGGTGTGCCATTGTCCTCGgatcacacgcacacagagaccaGGATGGACGACGATGAAAAGAGCAGCTTTATCTCTGCCAGTGTTTCCTCGACAAATGAAGTTGGAAAGTCTCTAAATCAACCTGAACAACAAAAGATAGAGAAATCGGACCTCTTAAGAACTTTTGAAGATTTGGGAGCCAAAGACTTTAAACGCTTCCAGTGGCTCCTGCAGCAGCCAGAGGTCCTTAAAGACTTCCCAGCAATCCCAAAGAGTCGACTGGAGAATGCAGACCGGATGGACACAGTGGATCAGATGTTCCAGATCTATAGTATAAACACTTTTAAAGTGACCAAGATAGTTTTAGAAAAGATGAATCAGAATGATCTAGTTCTAGATCTAGAGAAGTTAACAAAGACCGTTACAGAACCTGCAGAGAGTATTGCTGCAAAGAAGATATACAAAAACCGTCTTCATCAGATCTATGTAGATCGGATCTACTACACCAGTTTTTCTAGGCCTGGAAGTTACCCATATGGACAGGACTGGACTGGAGACGGACAAGAGATGGCAGTTGGAAGTGACGGGTCAGGAAGTGAGAATAGTGTAGGCCAGTGGTCAAAAAGTGGGAAAAAACGAAAGAAAGCAATACAGCACAAAACTGATAgaatctgcaggtttgaagatTTCGAGGTTGtcttcatctttgacggtctggatgaCTGTCGACTTCCTCTTGATTTCCACCACACTGAGATCCTaactgatgttacagagtccacctcaGCCCACGACACCTCCAGAGGGTTCAGCAGTAAATCCCAGCGTCCCAGGTTCACTCCCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257294 False 682 TUCP 0.44 3 35526848 35530343
XM_039781389.1 True 832 mRNA 0.45 5 35526888 35532983

Neighbor

gene id symbol gene type direction distance location
ccr6a NA coding upstream 123579 35389709 ~ 35403269 (+)
vta1 vta1 coding upstream 180918 35204206 ~ 35345930 (+)
gje1 LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776 coding upstream 333583 35187916 ~ 35193265 (+)
allc allc coding upstream 585517 34928418 ~ 34941331 (+)
LOC120546635 NA coding upstream 599685 34905991 ~ 34927163 (+)
LOC120546647 LOC100696183,LOC102786976 coding downstream 310779 35843762 ~ 35856031 (+)
LOC120546641 NA coding downstream 699967 36232950 ~ 36257742 (+)
LOC120546639 NA coding downstream 736305 36269288 ~ 36313267 (+)
LOC120546666 NA coding downstream 797162 36330145 ~ 36333053 (+)
LOC120546651 NA coding downstream 1133098 36666081 ~ 36681833 (+)
G189790 NA non-coding upstream 15948 35510425 ~ 35510900 (+)
G189784 NA non-coding upstream 16851 35432675 ~ 35509997 (+)
G189767 NA non-coding upstream 80427 35258578 ~ 35446421 (+)
G189772 NA non-coding upstream 149905 35328189 ~ 35376943 (+)
G189771 NA non-coding upstream 281467 35244524 ~ 35245381 (+)
LOC120546690 NA non-coding downstream 3722 35536705 ~ 35538563 (+)
G189801 NA non-coding downstream 66131 35599114 ~ 35787979 (+)
G189809 NA non-coding downstream 132211 35665194 ~ 35670696 (+)
G189831 NA non-coding downstream 264627 35797610 ~ 35817091 (+)
G189829 NA non-coding downstream 275843 35808826 ~ 35820379 (+)
G189770 NA other upstream 211811 35241255 ~ 35315037 (+)
G189769 NA other upstream 226870 35249741 ~ 35299978 (+)
G189723 NA other upstream 360460 35158223 ~ 35166388 (+)
LOC120546683 NA other upstream 379420 35145489 ~ 35147428 (+)
G189721 NA other upstream 449881 35014395 ~ 35076967 (+)
LOC120546463 myh6,LOC108251423,LOC102786665,LOC780532,LOC103381356,LOC103031694 other downstream 164144 35697127 ~ 35877941 (+)
zbtb25 zbtb25 other downstream 379513 35912496 ~ 35917525 (+)
G189858 NA other downstream 448835 35981818 ~ 36019599 (+)
G189895 LOC107578167,LOC107555837,LOC103375881,LOC103392301 other downstream 680898 36213881 ~ 36214599 (+)
G189897 NA other downstream 699682 36232665 ~ 36375834 (+)

Expression


Co-expression Network