G189809


Basic Information

Item Value
gene id G189809
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 35665194 ~ 35670696 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU257319
GCTGTGTTTGAACCCGTTCCCTATCACAGAAATAGTTCCCTATATATTGTGTTCGTCATTCTGTAGCGGTGTTCAAATTCTCCacggttaatttcattcactatataatccactataaaatacccacaatgcactgctaatCTGAATGTACATACGCtgtaccctacattttactcccatATCCCACAATGCCACACGTCGTGTTTTCctggaggagaaaaagaagcaGAAGCACCCACAGAAActgcaaaagaaaaatggaGCGGGCTTTGGTttttaaacagttgaaatataACATGCAACATTTAATATACAACCTTTTATTCTCCTGAGTGCTCGCTTTGATTCAGAGCgtataaaaagtattttttttccgtctgtttacatgatgctggcTGGCTCGCCTCAGTCACACAAATACCCGGTGCATCTCCTGACGCGACGATATTTCCATTGTGGCCGAAATCTCGTATACATTTCACTCTTTCATAAACACTATCAGGGCTTTAATTTGACACCCACCAGGTAAAAATAATAACTTTGGCAGGTAGCATTTTCAAGTTATTAGCCAATTCGTTCGGTGATGAATGAAGCTGATAAGTCTGCGTCTGTTTGAATCGGACGgctgcagaaatgttgccaGATTGGTCTGTTTTATCAAGAAATTTTGGCAGTTTTGTGCATCTTTGGCTTGGAAACGTAATCTTTATCTGGCAGCACTGCTTGTAGCACCAATCCTACATTACCCATGAACACTATGTGGTGATGTGTCGTACAACTGTCGGCTATGTGCCTAGCGTGCGAGGTATCGATCACGAGCTACGCTGAAACGGAGAAGACGAATGGAATGGTGCCAAACAAACCAGAGAAGCGGATAGTAAAGTCAAGTTAGTTAGGAAAGAAACTAATGTGGCTAGTGGaagatctgattggctgataaaTTTAAAAACCTACTAgccatgttggctggtgatcaaaCCAGTTGATTTAAAGCCCTGAACGCTATATAGGGAACAGTAAGTGAGGgaatgagggaacggtttccaacacaaatacatttacaaGTTTGTACAACACACGTAACAACAGTTATAGAAATACAGACAATATATTTGTTTCTATTTACATCAGTTCAAATAAATAGGAGGTACAGAAACAGGAACGAGCCCGTTAACAGTGGTCGACTCAGTGAGGAAGATCATGTGCAGGGTGGACCAGTGGTTAAACCAAAGTCACAGGTTCAAGTCCGAAATCTGAGCAAGGTGCTAACATTAACAGGTTTGTTATTTCACTTTTGTGTAAGGAGAACAAAACCTGACTTTTTAggatacaaataaataagagtACAAAAGTAAGTACAATGTTTGAATGAACGTGACACAAAAACCAGAaggcacaaaaacatagaaatacATCCACTGATGTATAACACATGAATCATAATTTGTTTGAGGGTAAAATTGTTTAGGTGATTGCCTCATTTGCTTATTGAAGgattacaaatataaaaaacattacttttaaAAGAAGGAATGTATGTTTGCTTACTATTAGTTTCAGTGTTCATTTGATGCTGTTGTTTACATCATCCactaatttatttttctcttttaaagcaGGTTTTGTCCTCCAAACGTTTATCTGAATGGCTGCACGCTCAATGTTCAGTGTGAGATGTTTGACACATTTGATGTTGTTAATGTctttaaatatcacaatatcagaGATTCTAATAAAACCAgaagaccaggcaacatttagACAGTTTTTTTAAGTGAAACTGTAGAAGATTAAAGGAACAGTCCAACATTTTGGGAACTTGTGAGCTTTAAAGCTATTGTCCGTGTTCGCAGCAACTCTAAAGACTTACGGAAAGGACTTACATATTTCTGTAGTGATAGGTACATTTTGTACATATCTACCTAGAACTTAGCTAGTTTGTCCCGTTATTATATTTCCCAGGAAACAAAAGCTAGTTTGGATGTGCATTACTGGGAATCCCGCTTCCTGGGAATACATCAAGTGTTGACCTTtagaaaagtgacagaaactaACTTTGTTTTTTCCTTTCTGCTCTAATTGTGGGCAAGTTTCATCCATACTATCTACACAAGATAAGGTATTTTGGTTTGAAAGTATCCTGTATCATAGATACATGTCTGGCATTTGTAGCAAAGCAAACAAATTGGTTGGAAATTCAGCAAGAATAAGTGACTAACGGTGGATAAACGTCCTGCCtccatagacacacatgcattagAAGGAGCCAAATGTTGGGCAAAACCTGTCCGCTGAATCGATGCATGGCTCCAATGAATGAGTACATATATACTGtttatatatatgcatattatAGGTGATGATATCAAACTGTCAGGAAACAGTTGACAACTAATGTAGAAAATGCCAAAATATTGGCAAGCCATGcagaatagatttttttttctttaaatgttgGTTGATTTCAGGAAATTGCAAAGCAGATTCATTTAGATGAAGTCATTATgattttatgtgtatgtgtgttatctGTATATGACTCTTCTGACAGGTCTGGAAGTGAAAatgaatatatgaataaatCTGTGAATACAAAGAGTTCTTAAAACCACTACTCACTTGGTCTAGTGTCCTACACCTGTTCAATTAACACGTGACAACATGTAAACCAGACTTCAGAGTTGTTGGAAGGTGTTGTTTTTCTAGGCTAGCAGTTCCCCCCTGTGTCCAGTTTTTGTGCTAAGCTACGCTACACATGTCCCAGACCTGTCTATGCACTGGACACATATCCATGAAAAATCTGTGTCTTTGGGGAAGACCGAGAACGACAagatttacagaaatgttggacTGTTCCCTTAATGTAAAAATAACACAAGAAGTTGTGCAGCTGCAAAATCTGCAAGTCATTATTGCAGAACAAAGAGACCTTTAGAGAGTTAGTTTATTGGTTTGTTCTCTTGTAGCAGAAATCCACACAGATGAGCTTTAATCTGTACAGAGGAGTAACTCtaaccaacccgttctcactcccaaacTCTTAAATCCTGACTCTTGGTCAGTGTCTTTCAGCGTCAGAAACCGACGCAAAAATCCCCTGTTAGCGTCGGTATGGGACAGGGGGGCAGAGCAGCTGCTCATCCACGGCGCTGCAAGATGaggtagtattaagagagacatcCGTAGCGAAAATCTGCGTATGGAGGCAGgtttgggggggtggatgggtcaaacaaacacaggactctcACCCAGGGGagcggggttcatgtcccgtttgaaaagaaaaggaaaagagttTTTCatgtctgatttgaacccaaacctccatcttttcatcaacttaactcagtagttttggtgtcttaaccacgtgtttaaaaccaccttctctggtttacaaaaaaattgaaaaaagcaacataaacTCCCCCATAAGTGGTATgttccagcatcattctgacATGTATTTAGGTTTCTAGTAAAGTAAGGTTAGGAAGTATGAAGGCTGATTTATGATTTACGAATCTGACCCCTCTCTGAGCCCTCCCACGTAGCTCGACGTGCACCTCCAAAAGAATTTAACTTTGCGTCGAGGCGACTCAgaccgcaaggactgtgattggtcaactggtcctgtgtgactgattggtcaactggtcctgtgtgttgagagtgggtgtttccagcagcctactgtggggagtagcaacatgctagttcattGACATCAGCTTTGCAAAAAAACTTggacatattttggttacaatgacggggttatccgtttgttaagtgtctatatgtcagtaacgttttgaaattagcacttcgccagcaagcagtactttgtgggcagttgtgctataaagttagcttgctaacataacataaactggctggcagacacctcgcaaataacctcagactgATCATcccgtagctagctagctacctagttatggcggtgaaatgcaccgcgatgcaaagGTACCCCGACGCCGTAGCTAGGGCGTGGAGTTgatgcagaagcataaaacagccttaagagggccaaatgtcctggtaaAGAGGCAGGTTGGGGCGGTTtatgtcctgttcttgtcccaAGTGTCACTGAAAACATACAATTTGTAACCCCATCCACCATCTATTCCTAAACCTAAATGTCCCGTTGTTTATGACAACTGTATGGGGGGAGATGTTAAATAACTCTTGTTAAAGCTTAAATTTGTGCTCAGCTTAAAGTTGTGTTCCAAACTGTGGTTGCAAAATGCCCCGTTCTTGTCAGTTAAACGTTCATATTTTAACACTGCACGTTGAGAAATAACGCCAAATCGGTCCCGaccaagtgttgttttttcacgctaggagtgagaatgtgttgctctAACACACAAAGCTTTTACAGCTGCAGAGAGAAGACGACTGTAACTGGAAGACTGGTCCCGTATGGCGTTTTTCGAccacatggtacctgctcaactcgcctcaactctactcgccttttttggttttccattttgataaacatttgattttttttttgttgctgcctccagcttcttttgaaactaaatgtgtcttctggtaaacagccacatgctgagaatcaaaaacacacaccttccaagttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcggtgagTGTGACTGTGTCTTCtggcaaacagccacatgccaAGAATCAAATACAACACAACTTCCACGTTCTGGAAGTTGTTGTTCTGTTGTTCTGCATGTGTGTCGCGTTAGCCGAGCCGAGCCAAgccgagcaggtaccatgtagtgGAAAAATGCCATCAGTGTAGCGACACTTCCTTAAAATCTACTTTCTTTAAGAATGACTGAAGAGGAAAATGCACAAACTCCCAGAACTTAAACTGCAATGCACAATGACATCCTGTACAAAAAGGTGCTATTAACAAATATTCTGACTGAAGATAGTTTTTACTTGATGACTGTATAAAGATATTTACATCTTTCTAGATATTTATCTACAAAATGCCAGAGACGTCGCTGGGAAAAGTTGTTGGATCTTTACATAATCTGTGTTAatcacaacaacaaatatattttgttttctaaatgtTTGATTTCTTGAAATCACAATCATTactttacatacatatatatttatcttACTATTAGAATTTGGGCTGATTCATTATTTCATGATCTCCACATTTAAACAATATCCGTCAGGATCTGGAGATGTTCTTCATACGTTCAAAATAACTTAATAATTACTTCATAATCACAGAACTTAAAGCATAAATTGTCCTCTCTAGCTAACAGTTGTCTGTTGTAGAATAATTAGTGTTTTTGTTGGAAAACTCAAAGTATAGAAATGTATGAGTTAAAACTCACACAACGTTCTTTGGAATCCTATTTACATATCTTTGGgtgtattaaaggtgcagtaggtgagactggttaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257319 True 5479 lncRNA 0.40 2 35665194 35670696

Neighbor

gene id symbol gene type direction distance location
ccr6a NA coding upstream 261925 35389709 ~ 35403269 (+)
vta1 vta1 coding upstream 319264 35204206 ~ 35345930 (+)
gje1 LOC103363062,LOC102290137,LOC105017734,LOC106571413,LOC106607819,LOC104934983,LOC108229299,LOC103146776 coding upstream 471929 35187916 ~ 35193265 (+)
allc allc coding upstream 723863 34928418 ~ 34941331 (+)
LOC120546635 NA coding upstream 738031 34905991 ~ 34927163 (+)
LOC120546647 LOC100696183,LOC102786976 coding downstream 173066 35843762 ~ 35856031 (+)
LOC120546641 NA coding downstream 562254 36232950 ~ 36257742 (+)
LOC120546639 NA coding downstream 598592 36269288 ~ 36313267 (+)
LOC120546666 NA coding downstream 659449 36330145 ~ 36333053 (+)
LOC120546651 NA coding downstream 995385 36666081 ~ 36681833 (+)
G189793 LOC105912973,LOC105900140,LOC105893089 non-coding upstream 95392 35530461 ~ 35569802 (+)
G189785 NA non-coding upstream 107153 35438961 ~ 35558041 (+)
LOC120546690 NA non-coding upstream 126631 35536705 ~ 35538563 (+)
G189790 NA non-coding upstream 154294 35510425 ~ 35510900 (+)
G189784 NA non-coding upstream 155197 35432675 ~ 35509997 (+)
G189831 NA non-coding downstream 126914 35797610 ~ 35817091 (+)
G189829 NA non-coding downstream 138130 35808826 ~ 35820379 (+)
G189827 NA non-coding downstream 145463 35816159 ~ 35822212 (+)
G189830 NA non-coding downstream 146057 35816753 ~ 35823860 (+)
G189826 NA non-coding downstream 195812 35866508 ~ 35914703 (+)
LOC120546462 NA other upstream 132211 35526848 ~ 35532983 (+)
G189770 NA other upstream 350157 35241255 ~ 35315037 (+)
G189769 NA other upstream 365216 35249741 ~ 35299978 (+)
G189723 NA other upstream 498806 35158223 ~ 35166388 (+)
LOC120546683 NA other upstream 517766 35145489 ~ 35147428 (+)
LOC120546463 myh6,LOC108251423,LOC102786665,LOC780532,LOC103381356,LOC103031694 other downstream 26431 35697127 ~ 35877941 (+)
zbtb25 zbtb25 other downstream 241800 35912496 ~ 35917525 (+)
G189858 NA other downstream 311122 35981818 ~ 36019599 (+)
G189895 LOC107578167,LOC107555837,LOC103375881,LOC103392301 other downstream 543185 36213881 ~ 36214599 (+)
G189897 NA other downstream 561969 36232665 ~ 36375834 (+)

Expression


Co-expression Network